Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_065871 18 1482 XP_005260528 18 1482 NP_005912 17 2528 XP_005248577 17 2528 XP_005248576 17 2528 NP_001135975 17 3301 XP_005262371 17 3301 NP_001278086 17 4312 NP_001181876 17 4312 NP_937887 17 4312 NP_937884 17 4312 NP_004944 17 4312 NP_001181875 17 4312 NP_937885 17 4312 NP_886553 17 4312 XP_005245231 17 4312 NP_001265616 16 5631 NP_001042 16 5631 XP_006726609 16 5631 XP_005261778 16 5631 XP_006724374 16 5631 XP_006719787 16 5631 XP_006710027 16 5631 NP_079160 16 7355 NP_862826 16 7355 NP_001230679 16 7355 XP_005268132 16 7355 XP_006713095 16 7355 NP_570124 15 9605 NP_071882 15 9605 NP_001136074 15 9605 NP_001136073 15 9605 NP_001035292 15 9605 NP_892010 15 9605 NP_057455 15 9605 NP_068807 15 9605 NP_006801 15 9605 XP_005257823 15 9605 XP_005262827 15 9605 XP_006714170 15 9605 XP_006714169 15 9605 XP_006714168 15 9605 XP_005262826 15 9605 XP_006714167 15 9605 XP_005264540 15 9605 XP_006712138 15 9605 XP_006711443 15 9605>NP_065871 Length = 1659 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 CRRLMAIA 9 CRRLMA++ Sbjct: 901 CRRLMALS 908>XP_005260528 Length = 956 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 CRRLMAIA 9 CRRLMA++ Sbjct: 198 CRRLMALS 205>NP_005912 Length = 1512 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MCRRLMAIA 9 M RRLMAIA Sbjct: 852 MRRRLMAIA 860>XP_005248577 Length = 1349 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MCRRLMAIA 9 M RRLMAIA Sbjct: 689 MRRRLMAIA 697>XP_005248576 Length = 1375 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MCRRLMAIA 9 M RRLMAIA Sbjct: 715 MRRRLMAIA 723>NP_001135975 Length = 1103 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 +CRRLM + Sbjct: 76 LCRRLMTL 83>XP_005262371 Length = 1107 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 +CRRLM + Sbjct: 76 LCRRLMTL 83>NP_001278086 Length = 1559 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 778 MCRCLMAL 785>NP_001181876 Length = 1606 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 825 MCRCLMAL 832>NP_937887 Length = 1512 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 731 MCRCLMAL 738>NP_937884 Length = 1599 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 818 MCRCLMAL 825>NP_004944 Length = 1404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 623 MCRCLMAL 630>NP_001181875 Length = 1606 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 825 MCRCLMAL 832>NP_937885 Length = 1435 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 654 MCRCLMAL 661>NP_886553 Length = 1600 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR LMA+ Sbjct: 819 MCRCLMAL 826>XP_005245231 Length = 166 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 +CRR MA+ Sbjct: 10 LCRRKMAV 17>NP_001265616 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR +MA+ Sbjct: 115 MCRLVMAV 122>NP_001042 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR +MA+ Sbjct: 115 MCRLVMAV 122>XP_006726609 Length = 2838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 +CR+LM I Sbjct: 254 ICRKLMVI 261>XP_005261778 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR +MA+ Sbjct: 115 MCRLVMAV 122>XP_006724374 Length = 418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 MCR +MA+ Sbjct: 115 MCRLVMAV 122>XP_006719787 Length = 2838 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 +CR+LM I Sbjct: 254 ICRKLMVI 261>XP_006710027 Length = 2837 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MCRRLMAI 8 +CR+LM I Sbjct: 254 ICRKLMVI 261>NP_079160 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CR LMAI Sbjct: 179 CRGLMAI 185>NP_862826 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CRRLMA 7 CRRL+A Sbjct: 14 CRRLLA 19>NP_001230679 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CRRLMA 7 CRRL+A Sbjct: 14 CRRLLA 19>XP_005268132 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CR LMAI Sbjct: 179 CRGLMAI 185>XP_006713095 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RRLMAIA 9 RRLMA+A Sbjct: 5 RRLMALA 11>NP_570124 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 2 CRRLM 6 CRRLM Sbjct: 146 CRRLM 150>NP_071882 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CRRLMAIA 9 C R+MA+A Sbjct: 541 CCRIMALA 548>NP_001136074 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MCRRLMA 7 +CRRL++ Sbjct: 142 LCRRLLS 148>NP_001136073 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MCRRLMA 7 +CRRL++ Sbjct: 142 LCRRLLS 148>NP_001035292 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CRR MA+ Sbjct: 137 CRRWMAL 143>NP_892010 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MCRRLMA 7 +CRRL++ Sbjct: 228 LCRRLLS 234>NP_057455 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MCRRLMA 7 +C+RL+A Sbjct: 18 LCKRLLA 24>NP_068807 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MCRRLMA 7 +CRRL++ Sbjct: 156 LCRRLLS 162>NP_006801 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 MCRRLM 6 MC+R+M Sbjct: 184 MCKRMM 189>XP_005257823 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MCRRLMA 7 +CRRL++ Sbjct: 142 LCRRLLS 148>XP_005262827 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714170 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714169 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714168 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_005262826 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714167 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CRRLMAI 8 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_005264540 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CRRLMAIA 9 C R+MA+A Sbjct: 540 CCRIMALA 547>XP_006712138 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CRRLMAIA 9 C R+MA+A Sbjct: 546 CCRIMALA 553>XP_006711443 Length = 218 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 MCRRLMA 7 +C+RL+A Sbjct: 18 LCKRLLA 24Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.360 0.142 0.465 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,009 Number of extensions: 355 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |