Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 19 665 NP_001091680 19 665 NP_001091679 19 665 XP_006713048 19 665 XP_006713047 19 665 XP_006713046 19 665 XP_005264943 19 665 NP_001518 18 1935 NP_001186091 17 4312 NP_001186090 17 4312 NP_006668 17 4312 NP_001186089 17 4312 NP_710142 17 4312 NP_001257410 17 4312 NP_002789 17 4312 XP_006714837 17 4312 XP_005264888 17 4312 XP_006713016 17 4312 XP_005264887 17 4312 XP_006713015 17 4312 XP_006713014 17 4312 XP_006713013 17 4312 XP_006713012 17 4312 XP_006713011 17 4312 XP_005264886 17 4312 XP_006713010 17 4312 XP_005264885 17 4312 XP_005264884 17 4312 XP_005264883 17 4312 XP_005264882 17 4312 XP_006713009 17 4312 XP_005264881 17 4312 XP_005264880 17 4312 NP_001011705 16 5631 NP_008946 16 5631 NP_005898 16 5631 NP_001274427 16 5631 NP_115671 16 5631 NP_996996 16 5631 XP_006719824 16 5631 XP_006719823 16 5631 XP_005267043 16 5631 NP_002791 16 5631 NP_116253 16 7355 NP_006690 16 7355 NP_653272 16 7355 NP_001171468 16 7355 NP_001171467 16 7355 XP_006719320 16 7355 XP_006710365 16 7355 NP_001611 15 9605 NP_872433 15 9605 XP_006718751 15 9605 XP_006718750 15 9605 XP_005274303 15 9605 XP_006718749 15 9605 XP_005274302 15 9605 XP_005274301 15 9605 XP_005274300 15 9605 XP_005274299 15 9605 XP_005274298 15 9605 XP_005274297 15 9605 XP_005269377 15 9605 XP_005269376 15 9605>NP_001895 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAVR AGGL Sbjct: 271 MAVRLAGGL 279>NP_001091680 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAVR AGGL Sbjct: 271 MAVRLAGGL 279>NP_001091679 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAVR AGGL Sbjct: 271 MAVRLAGGL 279>XP_006713048 Length = 720 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAVR AGGL Sbjct: 271 MAVRLAGGL 279>XP_006713047 Length = 774 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAVR AGGL Sbjct: 264 MAVRLAGGL 272>XP_006713046 Length = 774 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAVR AGGL Sbjct: 264 MAVRLAGGL 272>XP_005264943 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAVR AGGL Sbjct: 271 MAVRLAGGL 279>NP_001518 Length = 488 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAV +AGGL Sbjct: 132 MAVNWAGGL 140>NP_001186091 Length = 1372 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>NP_001186090 Length = 1384 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>NP_006668 Length = 1318 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>NP_001186089 Length = 1419 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>NP_710142 Length = 899 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 RFAGGL Sbjct: 531 RFAGGL 536>NP_001257410 Length = 213 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAV+F GG+ Sbjct: 38 MAVQFDGGV 46>NP_002789 Length = 239 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 MAVRFAGGL 9 MAV+F GG+ Sbjct: 38 MAVQFDGGV 46>XP_006714837 Length = 628 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VRFAGGL 9 +R+AGGL Sbjct: 567 IRYAGGL 573>XP_005264888 Length = 1268 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713016 Length = 1404 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264887 Length = 1322 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713015 Length = 1367 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713014 Length = 1368 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713013 Length = 1369 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_006713012 Length = 1373 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713011 Length = 1382 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264886 Length = 1386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713010 Length = 1405 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264885 Length = 1406 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264884 Length = 1408 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 139 VRFAGG 144>XP_005264883 Length = 1421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264882 Length = 1421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_006713009 Length = 1422 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264881 Length = 1423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>XP_005264880 Length = 1423 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 VRFAGG Sbjct: 154 VRFAGG 159>NP_001011705 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 +RFAGG Sbjct: 123 IRFAGG 128>NP_008946 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 +RFAGG Sbjct: 123 IRFAGG 128>NP_005898 Length = 653 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRFAGGL 9 +RF GGL Sbjct: 283 IRFVGGL 289>NP_001274427 Length = 478 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVRFAGGL 9 +V+FAGG+ Sbjct: 214 SVQFAGGI 221>NP_115671 Length = 443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVRFAGGL 9 +V+FAGG+ Sbjct: 214 SVQFAGGI 221>NP_996996 Length = 494 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVRFAGGL 9 +V+FAGG+ Sbjct: 214 SVQFAGGI 221>XP_006719824 Length = 217 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 +RFAGG Sbjct: 123 IRFAGG 128>XP_006719823 Length = 218 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VRFAGG 8 +RFAGG Sbjct: 123 IRFAGG 128>XP_005267043 Length = 736 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRFAGGL 9 +RF GGL Sbjct: 366 IRFVGGL 372>NP_002791 Length = 219 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 MAVRFAGGL 9 MAV F GG+ Sbjct: 24 MAVEFDGGV 32>NP_116253 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MAVRFAGGL 9 M +RF GG+ Sbjct: 52 MELRFVGGV 60>NP_006690 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRFAGGL 9 +RF GGL Sbjct: 269 IRFIGGL 275>NP_653272 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVRFAG 7 AVRFAG Sbjct: 80 AVRFAG 85>NP_001171468 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVRFAG 7 AVRFAG Sbjct: 80 AVRFAG 85>NP_001171467 Length = 262 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVRFAG 7 AVRFAG Sbjct: 93 AVRFAG 98>XP_006719320 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVRFAG 7 AVRFAG Sbjct: 80 AVRFAG 85>XP_006710365 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 VRFAGGL 9 +RF GGL Sbjct: 269 IRFIGGL 275>NP_001611 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 5612 KFAGGL 5617>NP_872433 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MAVRFAGG 8 MAV++ GG Sbjct: 1 MAVKWTGG 8>XP_006718751 Length = 3489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 3211 KFAGGL 3216>XP_006718750 Length = 4001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 3723 KFAGGL 3728>XP_005274303 Length = 4506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 4228 KFAGGL 4233>XP_006718749 Length = 4596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 4318 KFAGGL 4323>XP_005274302 Length = 5438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 5160 KFAGGL 5165>XP_005274301 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 5484 KFAGGL 5489>XP_005274300 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 5484 KFAGGL 5489>XP_005274299 Length = 5762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 5484 KFAGGL 5489>XP_005274298 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 5612 KFAGGL 5617>XP_005274297 Length = 5890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RFAGGL 9 +FAGGL Sbjct: 5612 KFAGGL 5617>XP_005269377 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MAVRFAGG 8 MAV++ GG Sbjct: 1 MAVKWTGG 8>XP_005269376 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MAVRFAGG 8 MAV++ GG Sbjct: 1 MAVKWTGG 8Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.339 0.150 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,888 Number of extensions: 286 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |