Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004963 20 299 XP_005251512 20 299 NP_055462 17 3301 NP_001171928 17 3301 NP_001171927 17 3301 XP_006725284 17 3301 XP_006725283 17 3301 XP_006725282 17 3301 XP_006725281 17 3301 XP_006725280 17 3301 XP_006725279 17 3301 XP_006725278 17 3301 XP_005255766 17 3301 XP_006721049 17 3301 XP_005255765 17 3301 XP_005255764 17 3301 XP_005255763 17 3301 XP_005255762 17 3301 XP_005255761 17 3301 NP_003593 17 4312 NP_001268233 17 4312 NP_001128683 17 4312 XP_006716216 17 4312 XP_005250700 17 4312 XP_006716215 17 4312 NP_001171922 16 5631 XP_006719914 16 5631 XP_005266530 16 5631 XP_006719913 16 5631 XP_006719912 16 5631 XP_006719911 16 5631 XP_006719910 16 5631 XP_006719909 16 5631 NP_112567 16 5631 NP_000381 16 7355 NP_005679 16 7355 NP_001018881 16 7355 NP_062823 16 7355 XP_006724678 16 7355 XP_006723348 16 7355 XP_006723347 16 7355 XP_005247116 16 7355 XP_005247115 16 7355 NP_758859 15 9605 NP_005209 15 9605 NP_071900 15 9605 NP_758424 15 9605 NP_061142 15 9605 NP_064627 15 9605 NP_056169 15 9605 NP_443179 15 9605 NP_060697 15 9605 XP_005266703 15 9605 XP_005266019 15 9605 XP_005266018 15 9605 XP_005266017 15 9605 XP_006714965 15 9605 XP_006714964 15 9605 XP_005266016 15 9605 XP_006714316 15 9605 XP_006713327 15 9605 XP_005265385 15 9605>NP_004963 Length = 1132 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 MACL MTEM Sbjct: 3 MACLTMTEM 11>XP_005251512 Length = 1132 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 MACL MTEM Sbjct: 3 MACLTMTEM 11>NP_055462 Length = 1742 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1354 CLMMTDL 1360>NP_001171928 Length = 1739 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1351 CLMMTDL 1357>NP_001171927 Length = 1742 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1354 CLMMTDL 1360>XP_006725284 Length = 1564 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1176 CLMMTDL 1182>XP_006725283 Length = 1600 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1212 CLMMTDL 1218>XP_006725282 Length = 1613 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1225 CLMMTDL 1231>XP_006725281 Length = 1733 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1345 CLMMTDL 1351>XP_006725280 Length = 1741 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1353 CLMMTDL 1359>XP_006725279 Length = 1743 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1355 CLMMTDL 1361>XP_006725278 Length = 1743 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1355 CLMMTDL 1361>XP_005255766 Length = 1564 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1176 CLMMTDL 1182>XP_006721049 Length = 1600 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1212 CLMMTDL 1218>XP_005255765 Length = 1613 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1225 CLMMTDL 1231>XP_005255764 Length = 1733 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1345 CLMMTDL 1351>XP_005255763 Length = 1741 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1353 CLMMTDL 1359>XP_005255762 Length = 1743 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1355 CLMMTDL 1361>XP_005255761 Length = 1743 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CLMMT++ Sbjct: 1355 CLMMTDL 1361>NP_003593 Length = 327 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ACLMMTE 8 ACL++TE Sbjct: 262 ACLLLTE 268>NP_001268233 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ACLMMTE 8 ACL++TE Sbjct: 232 ACLLLTE 238>NP_001128683 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ACLMMTE 8 ACL++TE Sbjct: 257 ACLLLTE 263>XP_006716216 Length = 282 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ACLMMTE 8 ACL++TE Sbjct: 217 ACLLLTE 223>XP_005250700 Length = 287 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ACLMMTE 8 ACL++TE Sbjct: 222 ACLLLTE 228>XP_006716215 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ACLMMTE 8 ACL++TE Sbjct: 257 ACLLLTE 263>NP_001171922 Length = 1619 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 59 CLLMTE 64>XP_006719914 Length = 1639 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 79 CLLMTE 84>XP_005266530 Length = 1643 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 79 CLLMTE 84>XP_006719913 Length = 1650 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 79 CLLMTE 84>XP_006719912 Length = 1672 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 59 CLLMTE 64>XP_006719911 Length = 1688 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 79 CLLMTE 84>XP_006719910 Length = 1692 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 79 CLLMTE 84>XP_006719909 Length = 1692 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 79 CLLMTE 84>NP_112567 Length = 1623 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 CLMMTE 8 CL+MTE Sbjct: 59 CLLMTE 64>NP_000381 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MACLMMTE 8 M+C M+TE Sbjct: 149 MSCEMLTE 156>NP_005679 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 + CLM+T++ Sbjct: 183 IVCLMITQL 191>NP_001018881 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 + CLM+T++ Sbjct: 183 IVCLMITQL 191>NP_062823 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MACLMM 6 MACLM+ Sbjct: 166 MACLML 171>XP_006724678 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 MACLMMTE 8 M+C M+TE Sbjct: 128 MSCEMLTE 135>XP_006723348 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MACLMM 6 MACLM+ Sbjct: 37 MACLML 42>XP_006723347 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 MACLMM 6 MACLM+ Sbjct: 166 MACLML 171>XP_005247116 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 + CLM+T++ Sbjct: 183 IVCLMITQL 191>XP_005247115 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 + CLM+T++ Sbjct: 183 IVCLMITQL 191>NP_758859 Length = 2427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 1299 LECLGLTEM 1307>NP_005209 Length = 68 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CL+++EM Sbjct: 12 CLLLSEM 18>NP_071900 Length = 2696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 1568 LECLGLTEM 1576>NP_758424 Length = 1642 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 +AC+ +TE+ Sbjct: 1146 LACIAITEI 1154>NP_061142 Length = 1642 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 MACLMMTEM 9 +AC+ +TE+ Sbjct: 1146 LACIAITEI 1154>NP_064627 Length = 1388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 MACLMMTE 8 M CL MT+ Sbjct: 1282 MECLRMTD 1289>NP_056169 Length = 1749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 MACLMMT 7 M CLM+T Sbjct: 306 MDCLMLT 312>NP_443179 Length = 2170 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CL++T+M Sbjct: 2075 CLLVTDM 2081>NP_060697 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 C+++TEM Sbjct: 156 CVVLTEM 162>XP_005266703 Length = 1501 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 CL++T+M Sbjct: 1406 CLLVTDM 1412>XP_005266019 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 66 LECLGLTEM 74>XP_005266018 Length = 2427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 1299 LECLGLTEM 1307>XP_005266017 Length = 2427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 1299 LECLGLTEM 1307>XP_006714965 Length = 2427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 1299 LECLGLTEM 1307>XP_006714964 Length = 2696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 1568 LECLGLTEM 1576>XP_005266016 Length = 2696 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 MACLMMTEM 9 + CL +TEM Sbjct: 1568 LECLGLTEM 1576>XP_006714316 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CLMMTEM 9 C+++TEM Sbjct: 81 CVVLTEM 87>XP_006713327 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 MACLMMTE 8 M CL MT+ Sbjct: 917 MECLRMTD 924>XP_005265385 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 MACLMMTE 8 M CL MT+ Sbjct: 1185 MECLRMTD 1192Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.346 0.125 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 531,691 Number of extensions: 565 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |