Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 299 NP_000170 20 299 NP_001268422 20 299 NP_001268423 20 299 XP_005264328 20 299 NP_009138 17 3301 NP_001136438 17 3301 NP_001144 17 3301 XP_006722611 17 3301 XP_006722610 17 3301 XP_006712063 17 3301 NP_055893 17 4312 NP_008986 16 5631 NP_004297 16 5631 NP_060113 16 5631 NP_061903 16 5631 NP_001003954 16 5631 NP_001180473 16 5631 NP_001146 16 5631 XP_006722025 16 5631 XP_005257527 16 5631 XP_005257526 16 5631 XP_005257525 16 5631 XP_005257524 16 5631 XP_006717660 16 5631 XP_005268489 16 5631 XP_005248601 16 5631 XP_006714716 16 5631 NP_055120 16 7355 NP_065962 16 7355 NP_115618 16 7355 XP_005250743 16 7355 XP_006716234 16 7355 XP_006713726 16 7355 NP_001139241 15 9605 NP_004619 15 9605 NP_001122400 15 9605 NP_001018098 15 9605 NP_060154 15 9605 NP_060550 15 9605 NP_065872 15 9605 NP_002855 15 9605 NP_997646 15 9605 NP_057480 15 9605 XP_006720629 15 9605 XP_005254498 15 9605 XP_006720628 15 9605 XP_005246589 15 9605 XP_006712561 15 9605 XP_006712265 15 9605 XP_005263913 15 9605 NP_002185 15 9605>NP_001268421 Length = 1230 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LYKFIKGA 8 LYKFIKGA Sbjct: 1156 LYKFIKGA 1163>NP_000170 Length = 1360 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LYKFIKGA 8 LYKFIKGA Sbjct: 1286 LYKFIKGA 1293>NP_001268422 Length = 1058 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LYKFIKGA 8 LYKFIKGA Sbjct: 984 LYKFIKGA 991>NP_001268423 Length = 1058 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LYKFIKGA 8 LYKFIKGA Sbjct: 984 LYKFIKGA 991>XP_005264328 Length = 1261 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LYKFIKGA 8 LYKFIKGA Sbjct: 1187 LYKFIKGA 1194>NP_009138 Length = 482 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YKFIKG 7 YKF+KG Sbjct: 435 YKFVKG 440>NP_001136438 Length = 1923 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKFIKGAS 9 +KF+KGA+ Sbjct: 1865 FKFLKGAT 1872>NP_001144 Length = 321 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LYKFIKG 7 LY FIKG Sbjct: 297 LYSFIKG 303>XP_006722611 Length = 1034 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKFIKGAS 9 +KF+KGA+ Sbjct: 976 FKFLKGAT 983>XP_006722610 Length = 1967 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YKFIKGAS 9 +KF+KGA+ Sbjct: 1909 FKFLKGAT 1916>XP_006712063 Length = 173 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LYKFIKG 7 LY FIKG Sbjct: 149 LYSFIKG 155>NP_055893 Length = 1114 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYKFIKGAS 9 L+K++KG S Sbjct: 748 LFKYLKGPS 756>NP_008986 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KFIKGAS 9 KFIKG S Sbjct: 971 KFIKGVS 977>NP_004297 Length = 316 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYKFIKGA 8 LYK +KGA Sbjct: 254 LYKSMKGA 261>NP_060113 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YKFIKGAS 9 Y F++GAS Sbjct: 605 YNFLQGAS 612>NP_061903 Length = 1369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYKFIKGAS 9 LY+ +KG S Sbjct: 445 LYRLVKGQS 453>NP_001003954 Length = 357 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYKFIKGA 8 LYK +KGA Sbjct: 295 LYKSMKGA 302>NP_001180473 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYKFIKGA 8 LYK +KGA Sbjct: 576 LYKSMKGA 583>NP_001146 Length = 673 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYKFIKGA 8 LYK +KGA Sbjct: 608 LYKSMKGA 615>XP_006722025 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YKFIKGAS 9 Y F++GAS Sbjct: 441 YNFLQGAS 448>XP_005257527 Length = 628 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YKFIKGAS 9 Y F++GAS Sbjct: 605 YNFLQGAS 612>XP_005257526 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YKFIKGAS 9 Y F++GAS Sbjct: 607 YNFLQGAS 614>XP_005257525 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YKFIKGAS 9 Y F++GAS Sbjct: 628 YNFLQGAS 635>XP_005257524 Length = 653 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YKFIKGAS 9 Y F++GAS Sbjct: 630 YNFLQGAS 637>XP_006717660 Length = 1369 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KFIKGAS 9 KFIKG S Sbjct: 950 KFIKGVS 956>XP_005268489 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LYKFIKGA 8 LYK +KGA Sbjct: 602 LYKSMKGA 609>XP_005248601 Length = 899 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYKFIKGAS 9 LY+ +KG S Sbjct: 445 LYRLVKGQS 453>XP_006714716 Length = 1318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYKFIKGAS 9 LY+ +KG S Sbjct: 445 LYRLVKGQS 453>NP_055120 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 YKFIKG 7 YKFI+G Sbjct: 70 YKFIQG 75>NP_065962 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 1446 LYKFLK 1451>NP_115618 Length = 1896 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 1449 LYKFLK 1454>XP_005250743 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 1446 LYKFLK 1451>XP_006716234 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 1446 LYKFLK 1451>XP_006713726 Length = 1910 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 1467 LYKFLK 1472>NP_001139241 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YKFIKGAS 9 YK +KG S Sbjct: 667 YKMVKGFS 674>NP_004619 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YKFIKGAS 9 YK +KG S Sbjct: 704 YKMVKGFS 711>NP_001122400 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YKFIKGAS 9 Y++IKG++ Sbjct: 159 YQYIKGSA 166>NP_001018098 Length = 3628 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 +YKF+K Sbjct: 2557 IYKFVK 2562>NP_060154 Length = 3710 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 +YKF+K Sbjct: 2514 IYKFVK 2519>NP_060550 Length = 3585 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 +YKF+K Sbjct: 2514 IYKFVK 2519>NP_065872 Length = 3753 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 +YKF+K Sbjct: 2557 IYKFVK 2562>NP_002855 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 LYKFIKG 7 +Y F+KG Sbjct: 662 IYSFLKG 668>NP_997646 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 65 LYKFMK 70>NP_057480 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KFIKGAS 9 KFIKG++ Sbjct: 54 KFIKGST 60>XP_006720629 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KFIKGAS 9 KFIKG++ Sbjct: 54 KFIKGST 60>XP_005254498 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KFIKGAS 9 KFIKG++ Sbjct: 54 KFIKGST 60>XP_006720628 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KFIKGAS 9 KFIKG++ Sbjct: 54 KFIKGST 60>XP_005246589 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YKFIKGAS 9 Y++IKG++ Sbjct: 159 YQYIKGSA 166>XP_006712561 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YKFIKGAS 9 Y++IKG++ Sbjct: 159 YQYIKGSA 166>XP_006712265 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 64 LYKFMK 69>XP_005263913 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LYKFIK 6 LYKF+K Sbjct: 65 LYKFMK 70>NP_002185 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 YKFIKGAS 9 Y++IKG++ Sbjct: 159 YQYIKGSA 166Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.144 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 481,316 Number of extensions: 758 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |