Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 18 1482 NP_001075109 18 1482 NP_000360 17 2528 XP_005268094 17 2528 NP_001128302 17 3301 NP_060121 17 3301 NP_001128303 17 3301 NP_001128304 17 3301 NP_001361 17 3301 NP_057531 17 3301 XP_005249832 17 3301 XP_006715803 17 3301 XP_006715802 17 3301 XP_006715801 17 3301 XP_005267096 17 3301 XP_006715570 17 3301 XP_006712019 17 3301 NP_620687 17 4312 NP_852111 17 4312 NP_000136 17 4312 NP_001127923 17 4312 NP_001127922 17 4312 NP_690877 17 4312 NP_002772 17 4312 NP_001123486 17 4312 NP_001010892 16 5631 NP_001155136 16 5631 XP_006715532 16 5631 NP_060606 16 7355 NP_001193775 16 7355 NP_001265305 16 7355 NP_001265310 16 7355 NP_001265299 16 7355 NP_001265302 16 7355 NP_001265301 16 7355 NP_001265303 16 7355 NP_001265304 16 7355 NP_005365 16 7355 NP_001136018 16 7355 NP_056299 16 7355 NP_361013 16 7355 NP_001265300 16 7355 XP_006721977 16 7355 XP_006721976 16 7355 XP_006721975 16 7355 NP_997053 16 7355 NP_004987 15 9605 NP_058640 15 9605 NP_004925 15 9605 NP_775925 15 9605 NP_001265618 15 9605 XP_006720948 15 9605 XP_006720947 15 9605 XP_005255386 15 9605 XP_005255385 15 9605 XP_005255384 15 9605 XP_006714498 15 9605 XP_005248285 15 9605 XP_005264801 15 9605 XP_006713174 15 9605 XP_005264800 15 9605>NP_008835 Length = 4128 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L ITVRNAK Sbjct: 670 LSITVRNAK 678>NP_001075109 Length = 4097 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L ITVRNAK Sbjct: 670 LSITVRNAK 678>NP_000360 Length = 764 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LYITVRN 7 +YITVRN Sbjct: 604 IYITVRN 610>XP_005268094 Length = 764 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LYITVRN 7 +YITVRN Sbjct: 604 IYITVRN 610>NP_001128302 Length = 1196 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+TVR K Sbjct: 530 LYVTVRGLK 538>NP_060121 Length = 1196 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+TVR K Sbjct: 530 LYVTVRGLK 538>NP_001128303 Length = 1196 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+TVR K Sbjct: 530 LYVTVRGLK 538>NP_001128304 Length = 1053 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+TVR K Sbjct: 530 LYVTVRGLK 538>NP_001361 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ITVRNAK 9 IT+RNAK Sbjct: 1542 ITIRNAK 1548>NP_057531 Length = 540 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T RNA+ Sbjct: 310 MYLTTRNAE 318>XP_005249832 Length = 428 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T RNA+ Sbjct: 198 MYLTTRNAE 206>XP_006715803 Length = 540 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T RNA+ Sbjct: 310 MYLTTRNAE 318>XP_006715802 Length = 540 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T RNA+ Sbjct: 310 MYLTTRNAE 318>XP_006715801 Length = 540 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T RNA+ Sbjct: 310 MYLTTRNAE 318>XP_005267096 Length = 1168 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+TVR K Sbjct: 530 LYVTVRGLK 538>XP_006715570 Length = 1179 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+TVR K Sbjct: 530 LYVTVRGLK 538>XP_006712019 Length = 4158 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ITVRNAK 9 IT+RNAK Sbjct: 1542 ITIRNAK 1548>NP_620687 Length = 1224 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 YITVRNA 8 YI+VRNA Sbjct: 785 YISVRNA 791>NP_852111 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LYITVRN 7 +Y+TVRN Sbjct: 526 IYLTVRN 532>NP_000136 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LYITVRN 7 +Y+TVRN Sbjct: 552 IYLTVRN 558>NP_001127923 Length = 321 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LYITVRNA 8 +Y+T+RNA Sbjct: 256 MYMTLRNA 263>NP_001127922 Length = 435 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LYITVRNA 8 +Y+T+RNA Sbjct: 358 MYMTLRNA 365>NP_690877 Length = 423 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LYITVRNA 8 +Y+T+RNA Sbjct: 358 MYMTLRNA 365>NP_002772 Length = 335 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YITVRNAK 9 YIT+ N+K Sbjct: 150 YITINNSK 157>NP_001123486 Length = 335 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 YITVRNAK 9 YIT+ N+K Sbjct: 150 YITINNSK 157>NP_001010892 Length = 716 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L IT++NAK Sbjct: 207 LEITIQNAK 215>NP_001155136 Length = 600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L IT++NAK Sbjct: 207 LEITIQNAK 215>XP_006715532 Length = 632 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L IT++NAK Sbjct: 207 LEITIQNAK 215>NP_060606 Length = 3477 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LYITVRNA 8 LY+ V+NA Sbjct: 3130 LYLAVKNA 3137>NP_001193775 Length = 1892 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LYITVRNA 8 LY+ V+NA Sbjct: 1545 LYLAVKNA 1552>NP_001265305 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 339 MYLTTKNAE 347>NP_001265310 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 322 MYLTTKNAE 330>NP_001265299 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 367 MYLTTKNAE 375>NP_001265302 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 311 MYLTTKNAE 319>NP_001265301 Length = 576 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 346 MYLTTKNAE 354>NP_001265303 Length = 413 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 183 MYLTTKNAE 191>NP_001265304 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 311 MYLTTKNAE 319>NP_005365 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 322 MYLTTKNAE 330>NP_001136018 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YITVRNA 8 ++TVRNA Sbjct: 917 HVTVRNA 923>NP_056299 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YITVRNAK 9 YI RNAK Sbjct: 210 YINERNAK 217>NP_361013 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YITVRNA 8 ++TVRNA Sbjct: 917 HVTVRNA 923>NP_001265300 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 311 MYLTTKNAE 319>XP_006721977 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 305 MYLTTKNAE 313>XP_006721976 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 316 MYLTTKNAE 324>XP_006721975 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 +Y+T +NA+ Sbjct: 333 MYLTTKNAE 341>NP_997053 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YITVRNAK 9 YI RNAK Sbjct: 168 YINERNAK 175>NP_004987 Length = 1531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITVRNA 8 ITVRNA Sbjct: 644 ITVRNA 649>NP_058640 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 L+ITV N K Sbjct: 25 LFITVVNCK 33>NP_004925 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L+IT+R +K Sbjct: 632 LFITLRRSK 640>NP_775925 Length = 443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+ +RN K Sbjct: 159 LYLDLRNIK 167>NP_001265618 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+ +RN K Sbjct: 159 LYLDLRNIK 167>XP_006720948 Length = 1401 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITVRNA 8 ITVRNA Sbjct: 514 ITVRNA 519>XP_006720947 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITVRNA 8 ITVRNA Sbjct: 644 ITVRNA 649>XP_005255386 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITVRNA 8 ITVRNA Sbjct: 644 ITVRNA 649>XP_005255385 Length = 1485 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITVRNA 8 ITVRNA Sbjct: 598 ITVRNA 603>XP_005255384 Length = 1489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ITVRNA 8 ITVRNA Sbjct: 602 ITVRNA 607>XP_006714498 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L+IT+R +K Sbjct: 632 LFITLRRSK 640>XP_005248285 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LYITVRNAK 9 L+IT+R +K Sbjct: 632 LFITLRRSK 640>XP_005264801 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+ +RN K Sbjct: 159 LYLDLRNIK 167>XP_006713174 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+ +RN K Sbjct: 159 LYLDLRNIK 167>XP_005264800 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LYITVRNAK 9 LY+ +RN K Sbjct: 159 LYLDLRNIK 167Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.137 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 352,186 Number of extensions: 579 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |