Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 19 869 XP_005248577 19 869 XP_005248576 19 869 NP_001129477 17 4312 NP_001129478 17 4312 NP_055685 17 4312 NP_000810 17 4312 NP_937793 17 4312 XP_006724053 17 4312 XP_006724052 17 4312 XP_005260998 17 4312 XP_006724051 17 4312 NP_780294 17 4312 NP_001077090 17 4312 NP_005948 16 5631 NP_872348 16 5631 NP_004498 16 5631 XP_005263520 16 5631 XP_005263519 16 5631 XP_005263518 16 5631 XP_005263517 16 5631 XP_005263515 16 5631 NP_072179 16 7355 NP_002881 16 7355 NP_009054 16 7355 NP_996816 16 7355 NP_877950 16 7355 NP_877953 16 7355 NP_689616 16 7355 NP_001192230 16 7355 NP_004827 16 7355 NP_064522 16 7355 NP_689757 16 7355 XP_005272685 16 7355 XP_006713925 16 7355 NP_612206 16 7355 NP_001073286 15 9605 NP_000201 15 9605 NP_060257 15 9605 NP_001077382 15 9605 NP_005036 15 9605 NP_774959 15 9605 NP_002717 15 9605 NP_001139192 15 9605 NP_002228 15 9605 NP_056510 15 9605 NP_056034 15 9605 NP_055524 15 9605 NP_001269242 15 9605 NP_001264671 15 9605 NP_001013861 15 9605 NP_063938 15 9605 NP_940893 15 9605 NP_001138771 15 9605 NP_001138770 15 9605 NP_001138769 15 9605 XP_006723849 15 9605 XP_006723848 15 9605 XP_006721852 15 9605 XP_006721851 15 9605 XP_006721850 15 9605 XP_006721849 15 9605 XP_005255988 15 9605 XP_005267101 15 9605 XP_006715123 15 9605 XP_005249068 15 9605 XP_005249067 15 9605 XP_006712574 15 9605 XP_006712573 15 9605 XP_005264490 15 9605 NP_839943 15 9605>NP_005912 Length = 1512 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 L VEDTLDG Sbjct: 871 LGVEDTLDG 879>XP_005248577 Length = 1349 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 L VEDTLDG Sbjct: 708 LGVEDTLDG 716>XP_005248576 Length = 1375 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 L VEDTLDG Sbjct: 734 LGVEDTLDG 742>NP_001129477 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 187 IVIEELLDG 195>NP_001129478 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 187 IVIEELLDG 195>NP_055685 Length = 1239 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 + VED LDG Sbjct: 1221 VTVEDLLDG 1229>NP_000810 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 187 IVIEELLDG 195>NP_937793 Length = 536 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 LVV D+ DG Sbjct: 36 LVVSDSFDG 44>XP_006724053 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 187 IVIEELLDG 195>XP_006724052 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 187 IVIEELLDG 195>XP_005260998 Length = 1010 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 187 IVIEELLDG 195>XP_006724051 Length = 1026 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 203 IVIEELLDG 211>NP_780294 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +V+E+ LDG Sbjct: 187 IVIEELLDG 195>NP_001077090 Length = 1239 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 + VED LDG Sbjct: 1221 VTVEDLLDG 1229>NP_005948 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VVEDTLD 8 VVEDTL+ Sbjct: 635 VVEDTLE 641>NP_872348 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LVVEDTLDG 9 +++ED+L+G Sbjct: 519 IILEDSLEG 527>NP_004498 Length = 280 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 LV+E LDG Sbjct: 180 LVIEANLDG 188>XP_005263520 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VVEDTLD 8 VVEDTL+ Sbjct: 553 VVEDTLE 559>XP_005263519 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VVEDTLD 8 VVEDTL+ Sbjct: 635 VVEDTLE 641>XP_005263518 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VVEDTLD 8 VVEDTL+ Sbjct: 635 VVEDTLE 641>XP_005263517 Length = 656 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VVEDTLD 8 VVEDTL+ Sbjct: 635 VVEDTLE 641>XP_005263515 Length = 697 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VVEDTLD 8 VVEDTL+ Sbjct: 676 VVEDTLE 682>NP_072179 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 V+ DT+DG Sbjct: 272 VLNDTVDG 279>NP_002881 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 V+ DT+DG Sbjct: 449 VLNDTVDG 456>NP_009054 Length = 1546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 V+E T+DG Sbjct: 164 VIEKTVDG 171>NP_996816 Length = 5202 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 V+E T+DG Sbjct: 164 VIEKTVDG 171>NP_877950 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +VED +DG Sbjct: 759 LVEDAVDG 766>NP_877953 Length = 152 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +VED +DG Sbjct: 136 LVEDAVDG 143>NP_689616 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +VED +DG Sbjct: 993 LVEDAVDG 1000>NP_001192230 Length = 1017 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +VED +DG Sbjct: 1001 LVEDAVDG 1008>NP_004827 Length = 1116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 LV+ TLDG Sbjct: 105 LVIISTLDG 113>NP_064522 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEDTLDG 9 V+DT+DG Sbjct: 593 VKDTVDG 599>NP_689757 Length = 757 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +VV+D L+G Sbjct: 203 IVVQDVLNG 211>XP_005272685 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEDTLDG 9 V+DT+DG Sbjct: 567 VKDTVDG 573>XP_006713925 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 +VV+D L+G Sbjct: 203 IVVQDVLNG 211>NP_612206 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 VVEDTLDG 9 V DTLDG Sbjct: 239 VSSDTLDG 246>NP_001073286 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 L +ED +DG Sbjct: 161 LRIEDDMDG 169>NP_000201 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 L +ED +DG Sbjct: 161 LRIEDDMDG 169>NP_060257 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 272 LIDDALDG 279>NP_001077382 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 293 LIDDALDG 300>NP_005036 Length = 3460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVVEDTLD 8 +V+ED+LD Sbjct: 358 VVLEDSLD 365>NP_774959 Length = 3458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVVEDTLD 8 +V+ED+LD Sbjct: 358 VVLEDSLD 365>NP_002717 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 L V+D+L+G Sbjct: 100 LYVQDSLEG 108>NP_001139192 Length = 495 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 LVV D+L G Sbjct: 205 LVVRDSLGG 213>NP_002228 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VVEDTLDG 9 + ED LDG Sbjct: 156 IAEDHLDG 163>NP_056510 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVVEDTLD 8 L VEDT+D Sbjct: 1156 LGVEDTVD 1163>NP_056034 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 316 LIQDALDG 323>NP_055524 Length = 3546 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 + ++DTL+G Sbjct: 2048 VTIKDTLEG 2056>NP_001269242 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 306 LIQDALDG 313>NP_001264671 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LVVEDTL 7 LV++DTL Sbjct: 88 LVIQDTL 94>NP_001013861 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 347 LIQDALDG 354>NP_063938 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LVVEDTL 7 LV++DTL Sbjct: 163 LVIQDTL 169>NP_940893 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 L +E+T+DG Sbjct: 161 LQLEETVDG 169>NP_001138771 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 370 LIQDALDG 377>NP_001138770 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 339 LIQDALDG 346>NP_001138769 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 398 LIQDALDG 405>XP_006723849 Length = 275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VVEDTLDG 9 + ED LDG Sbjct: 156 IAEDHLDG 163>XP_006723848 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VVEDTLDG 9 + ED LDG Sbjct: 156 IAEDHLDG 163>XP_006721852 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 316 LIQDALDG 323>XP_006721851 Length = 689 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 339 LIQDALDG 346>XP_006721850 Length = 697 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 347 LIQDALDG 354>XP_006721849 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VVEDTLDG 9 +++D LDG Sbjct: 370 LIQDALDG 377>XP_005255988 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 L +E+T+DG Sbjct: 161 LQLEETVDG 169>XP_005267101 Length = 449 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVVEDTLDG 9 L V+D+L+G Sbjct: 100 LYVQDSLEG 108>XP_006715123 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVVEDTLD 8 L VEDT+D Sbjct: 523 LGVEDTVD 530>XP_005249068 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVVEDTLD 8 L VEDT+D Sbjct: 1156 LGVEDTVD 1163>XP_005249067 Length = 1205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVVEDTLD 8 L VEDT+D Sbjct: 1156 LGVEDTVD 1163>XP_006712574 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 L +ED +DG Sbjct: 161 LRIEDDMDG 169>XP_006712573 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVVEDTLDG 9 L +ED +DG Sbjct: 161 LRIEDDMDG 169>XP_005264490 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LVVEDTL 7 LV++DTL Sbjct: 105 LVIQDTL 111>NP_839943 Length = 1631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 VVEDTL 7 VVEDTL Sbjct: 222 VVEDTL 227Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.144 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 538,023 Number of extensions: 879 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |