Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 19 665 NP_060785 19 665 NP_361014 19 665 NP_001257903 17 4312 NP_001784 17 4312 NP_001275505 17 4312 NP_001093881 17 4312 NP_078857 17 4312 XP_006721269 17 4312 XP_005276150 17 4312 NP_061119 16 5631 NP_613258 16 5631 NP_613075 16 5631 NP_001035248 16 5631 NP_004884 16 5631 XP_005272192 16 5631 XP_005272191 16 5631 XP_005272189 16 5631 NP_000065 16 7355 NP_001129494 16 7355 NP_001275731 16 7355 NP_001040 16 7355 NP_003255 16 7355 NP_064425 16 7355 NP_001001290 16 7355 NP_001136095 16 7355 NP_001136094 16 7355 NP_115873 16 7355 XP_005263250 16 7355 XP_005263252 16 7355 XP_005263253 16 7355 XP_005263254 16 7355 XP_005263251 16 7355 XP_006714032 16 7355 XP_006714031 16 7355 NP_001073121 15 9605 NP_689957 15 9605 NP_821174 15 9605 NP_060340 15 9605 XP_006716564 15 9605 XP_005250826 15 9605 NP_001106 15 9605 NP_659493 15 9605>NP_001013433 Length = 589 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LVTLESGG 8 LVTLESGG Sbjct: 542 LVTLESGG 549>NP_060785 Length = 627 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LVTLESGG 8 LVTLESGG Sbjct: 580 LVTLESGG 587>NP_361014 Length = 707 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LVTLESGG 8 LVTLESGG Sbjct: 660 LVTLESGG 667>NP_001257903 Length = 5121 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVTLESGGV 9 L T+ESGG+ Sbjct: 3352 LQTIESGGL 3360>NP_001784 Length = 829 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VTLESGG 8 VTLE+GG Sbjct: 36 VTLEAGG 42>NP_001275505 Length = 936 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVTLESGGV 9 L LESGGV Sbjct: 861 LSALESGGV 869>NP_001093881 Length = 971 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVTLESGGV 9 L LESGGV Sbjct: 896 LSALESGGV 904>NP_078857 Length = 1140 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LVTLESGGV 9 L LESGGV Sbjct: 1065 LSALESGGV 1073>XP_006721269 Length = 5138 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVTLESGGV 9 L T+ESGG+ Sbjct: 3369 LQTIESGGL 3377>XP_005276150 Length = 156 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVTLESGGV 9 L T+ESGG+ Sbjct: 88 LQTIESGGL 96>NP_061119 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>NP_613258 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>NP_613075 Length = 369 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>NP_001035248 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>NP_004884 Length = 371 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>XP_005272192 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>XP_005272191 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>XP_005272189 Length = 368 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VT+ SGGV Sbjct: 98 VTIASGGV 105>NP_000065 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LVTLESG 7 LVTLE+G Sbjct: 152 LVTLENG 158>NP_001129494 Length = 964 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VTLESGG 8 +TLE GG Sbjct: 939 ITLEEGG 945>NP_001275731 Length = 889 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VTLESGG 8 +TLE GG Sbjct: 864 ITLEEGG 870>NP_001040 Length = 391 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LESGGV 9 LESGGV Sbjct: 373 LESGGV 378>NP_003255 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 L TLE+GG Sbjct: 525 LKTLEAGG 532>NP_064425 Length = 540 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VTL +GG+ Sbjct: 356 VTLSTGGI 363>NP_001001290 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VTL +GG+ Sbjct: 327 VTLSTGGI 334>NP_001136095 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVTLESGG 8 +VTL++GG Sbjct: 262 VVTLDAGG 269>NP_001136094 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVTLESGG 8 +VTL++GG Sbjct: 223 VVTLDAGG 230>NP_115873 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVTLESGG 8 +VTL++GG Sbjct: 262 VVTLDAGG 269>XP_005263250 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 L TLE+GG Sbjct: 525 LKTLEAGG 532>XP_005263252 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 L TLE+GG Sbjct: 525 LKTLEAGG 532>XP_005263253 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 L TLE+GG Sbjct: 525 LKTLEAGG 532>XP_005263254 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 L TLE+GG Sbjct: 525 LKTLEAGG 532>XP_005263251 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 L TLE+GG Sbjct: 525 LKTLEAGG 532>XP_006714032 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VTL +GG+ Sbjct: 327 VTLSTGGI 334>XP_006714031 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VTLESGGV 9 VTL +GG+ Sbjct: 356 VTLSTGGI 363>NP_001073121 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLESGG 8 VTL++GG Sbjct: 541 VTLDNGG 547>NP_689957 Length = 2213 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VTLESGG 8 VTL++GG Sbjct: 2054 VTLDNGG 2060>NP_821174 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 LVT++ GG Sbjct: 425 LVTVDGGG 432>NP_060340 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVTLESGG 8 LVT++ GG Sbjct: 426 LVTVDGGG 433>XP_006716564 Length = 1185 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LESGGV 9 LESGG+ Sbjct: 540 LESGGI 545>XP_005250826 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LESGGV 9 LESGG+ Sbjct: 540 LESGGI 545>NP_001106 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LESGGV 9 LESGG+ Sbjct: 540 LESGGI 545>NP_659493 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VTLESGGV 9 ++LESGG+ Sbjct: 100 LSLESGGL 107Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.138 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 589,631 Number of extensions: 654 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |