Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 509 NP_115825 16 5631 NP_005308 16 5631 NP_001186363 16 5631 NP_001160005 16 5631 XP_005256247 16 5631 XP_006710486 16 5631 XP_006710485 16 5631 XP_005270648 16 5631 XP_005270647 16 5631 NP_057185 16 5631 NP_001136021 16 5631 NP_113664 16 5631 NP_077726 16 5631 NP_000128 16 7355 NP_001155155 16 7355 NP_733764 16 7355 NP_653273 16 7355 NP_005420 16 7355 NP_001161840 16 7355 NP_065743 16 7355 NP_001229761 16 7355 NP_055829 16 7355 NP_115765 16 7355 XP_005253225 16 7355 XP_006718409 16 7355 XP_005253224 16 7355 XP_005253223 16 7355 NP_002264 15 9605 NP_001243211 15 9605 NP_001243222 15 9605 NP_003949 15 9605 NP_940953 15 9605 NP_898901 15 9605 XP_006715306 15 9605 XP_006715305 15 9605 XP_006715304 15 9605 XP_006711367 15 9605 XP_005273178 15 9605>NP_000312 Length = 928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LVSIGKSFG 9 LVSIG+SFG Sbjct: 832 LVSIGESFG 840>NP_115825 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSIGKSFG 9 L+ IGK FG Sbjct: 309 LMRIGKRFG 317>NP_005308 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSIGKSFG 9 +S+G SFG Sbjct: 16 LSVGSSFG 23>NP_001186363 Length = 133 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSIGKSFG 9 LVS+G FG Sbjct: 63 LVSLGTCFG 71>NP_001160005 Length = 704 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IGKSFG 9 +GKSFG Sbjct: 87 VGKSFG 92>XP_005256247 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSIGKSFG 9 LVSIG++ G Sbjct: 107 LVSIGQNLG 115>XP_006710486 Length = 816 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSIGKSFG 9 L+ IGK FG Sbjct: 309 LMRIGKRFG 317>XP_006710485 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSIGKSFG 9 L+ IGK FG Sbjct: 309 LMRIGKRFG 317>XP_005270648 Length = 852 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSIGKSFG 9 L+ IGK FG Sbjct: 309 LMRIGKRFG 317>XP_005270647 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSIGKSFG 9 L+ IGK FG Sbjct: 309 LMRIGKRFG 317>NP_057185 Length = 180 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LVSIGKSFG 9 LVS+G FG Sbjct: 63 LVSLGTCFG 71>NP_001136021 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IGKSFG 9 +GKSFG Sbjct: 87 VGKSFG 92>NP_113664 Length = 497 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVSIGKSFG 9 LVSIG++ G Sbjct: 107 LVSIGQNLG 115>NP_077726 Length = 724 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IGKSFG 9 +GKSFG Sbjct: 87 VGKSFG 92>NP_000128 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IGKSFG 9 +GKSFG Sbjct: 251 LGKSFG 256>NP_001155155 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSIGKSF 8 L+S+GKS+ Sbjct: 564 LISLGKSW 571>NP_733764 Length = 815 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSIGKSF 8 L+S+GKS+ Sbjct: 319 LISLGKSW 326>NP_653273 Length = 1139 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSIGKSF 8 L+S+GKS+ Sbjct: 643 LISLGKSW 650>NP_005420 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 VSIGKSFG 9 + +GK FG Sbjct: 138 IDVGKEFG 145>NP_001161840 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 +IGK+FG Sbjct: 389 AIGKAFG 395>NP_065743 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 +IGK+FG Sbjct: 389 AIGKAFG 395>NP_001229761 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G+SFG Sbjct: 336 SLGESFG 342>NP_055829 Length = 430 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LVSIGKSFG 9 + IGK FG Sbjct: 323 MTGIGKGFG 331>NP_115765 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G+SFG Sbjct: 364 SLGESFG 370>XP_005253225 Length = 535 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G+SFG Sbjct: 378 SLGESFG 384>XP_006718409 Length = 546 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G+SFG Sbjct: 389 SLGESFG 395>XP_005253224 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G+SFG Sbjct: 392 SLGESFG 398>XP_005253223 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G+SFG Sbjct: 403 SLGESFG 409>NP_002264 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SIGKSFG 9 S+G SFG Sbjct: 438 SLGSSFG 444>NP_001243211 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SIGKSFG 9 S+G SFG Sbjct: 466 SLGSSFG 472>NP_001243222 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SIGKSFG 9 S+G SFG Sbjct: 438 SLGSSFG 444>NP_003949 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VSIGKSFG 9 V++G+ FG Sbjct: 38 VTVGRGFG 45>NP_940953 Length = 1907 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G++FG Sbjct: 89 SVGRTFG 95>NP_898901 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VSIGKSFG 9 V++G+ FG Sbjct: 38 VTVGRGFG 45>XP_006715306 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VSIGKSFG 9 V++G+ FG Sbjct: 38 VTVGRGFG 45>XP_006715305 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VSIGKSFG 9 V++G+ FG Sbjct: 38 VTVGRGFG 45>XP_006715304 Length = 455 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 VSIGKSFG 9 V++G+ FG Sbjct: 38 VTVGRGFG 45>XP_006711367 Length = 1872 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G++FG Sbjct: 89 SVGRTFG 95>XP_005273178 Length = 1931 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 SIGKSFG 9 S+G++FG Sbjct: 89 SVGRTFG 95Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.145 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 493,036 Number of extensions: 663 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |