Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_852668 16 5631 NP_057184 16 5631 NP_001001657 16 5631 NP_078789 16 7355 XP_005265541 16 7355 XP_006713398 16 7355 XP_006713397 16 7355 XP_006713396 16 7355 NP_060854 15 9605 NP_055877 15 9605 NP_001275656 15 9605 NP_001275657 15 9605 NP_004125 15 9605 NP_001013725 15 9605 NP_001034464 15 9605 NP_077025 15 9605 NP_001242911 15 9605 NP_001242918 15 9605 NP_954705 15 9605 NP_001242913 15 9605 NP_001242914 15 9605 NP_001242916 15 9605 NP_001242912 15 9605 NP_001242917 15 9605 NP_076932 15 9605 NP_001242915 15 9605 NP_663771 15 9605 NP_006860 15 9605 NP_001271240 15 9605 NP_001271239 15 9605 NP_001271238 15 9605 NP_001271237 15 9605 NP_619636 15 9605 NP_001186506 15 9605 XP_006723687 15 9605 XP_006723686 15 9605 XP_006723685 15 9605 XP_006723684 15 9605 XP_006723683 15 9605 XP_005254450 15 9605 XP_005254449 15 9605 XP_006717794 15 9605 XP_005269715 15 9605 XP_006717793 15 9605 XP_005269713 15 9605 XP_006711960 15 9605 XP_005263910 15 9605>NP_852668 Length = 166 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSEREGAF 9 +SER+G F Sbjct: 87 ISERKGGF 94>NP_057184 Length = 178 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSEREGAF 9 +SER+G F Sbjct: 99 ISERKGGF 106>NP_001001657 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 SEREG F Sbjct: 266 SEREGKF 272>NP_078789 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SEREGA 8 SEREGA Sbjct: 849 SEREGA 854>XP_005265541 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SEREGA 8 SEREGA Sbjct: 849 SEREGA 854>XP_006713398 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SEREGA 8 SEREGA Sbjct: 849 SEREGA 854>XP_006713397 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SEREGA 8 SEREGA Sbjct: 849 SEREGA 854>XP_006713396 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SEREGA 8 SEREGA Sbjct: 849 SEREGA 854>NP_060854 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 EREG+F Sbjct: 213 EREGSF 218>NP_055877 Length = 1664 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 LVS REG+ Sbjct: 155 LVSPREGS 162>NP_001275656 Length = 1400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 LVS REG+ Sbjct: 155 LVSPREGS 162>NP_001275657 Length = 1542 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 LVS REG+ Sbjct: 35 LVSPREGS 42>NP_004125 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 + SEREG+ Sbjct: 655 MASEREGS 662>NP_001013725 Length = 1649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 LVS++EG+ Sbjct: 1453 LVSDKEGS 1460>NP_001034464 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 +EREG F Sbjct: 178 TEREGGF 184>NP_077025 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 +EREG F Sbjct: 206 TEREGGF 212>NP_001242911 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 185 EKEGAF 190>NP_001242918 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 135 EKEGAF 140>NP_954705 Length = 268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 206 EKEGAF 211>NP_001242913 Length = 223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 161 EKEGAF 166>NP_001242914 Length = 285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 223 EKEGAF 228>NP_001242916 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 159 EKEGAF 164>NP_001242912 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 185 EKEGAF 190>NP_001242917 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 159 EKEGAF 164>NP_076932 Length = 271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 209 EKEGAF 214>NP_001242915 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 183 EKEGAF 188>NP_663771 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 +REGAF Sbjct: 420 DREGAF 425>NP_006860 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 +++EREGA Sbjct: 152 VLTEREGA 159>NP_001271240 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 +++EREGA Sbjct: 57 VLTEREGA 64>NP_001271239 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 +++EREGA Sbjct: 80 VLTEREGA 87>NP_001271238 Length = 302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 +++EREGA Sbjct: 80 VLTEREGA 87>NP_001271237 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 +++EREGA Sbjct: 163 VLTEREGA 170>NP_619636 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSEREGA 8 VSE EGA Sbjct: 127 VSENEGA 133>NP_001186506 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 EREG+F Sbjct: 417 EREGSF 422>XP_006723687 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 +EREG F Sbjct: 49 TEREGGF 55>XP_006723686 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 +EREG F Sbjct: 49 TEREGGF 55>XP_006723685 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 +EREG F Sbjct: 49 TEREGGF 55>XP_006723684 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 +EREG F Sbjct: 206 TEREGGF 212>XP_006723683 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 SEREGAF 9 +EREG F Sbjct: 206 TEREGGF 212>XP_005254450 Length = 1505 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 LVS++EG+ Sbjct: 1453 LVSDKEGS 1460>XP_005254449 Length = 1626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LVSEREGA 8 LVS++EG+ Sbjct: 1453 LVSDKEGS 1460>XP_006717794 Length = 1194 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 LVS REG+ Sbjct: 155 LVSPREGS 162>XP_005269715 Length = 1230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 LVS REG+ Sbjct: 155 LVSPREGS 162>XP_006717793 Length = 1603 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 LVS REG+ Sbjct: 155 LVSPREGS 162>XP_005269713 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVSEREGA 8 LVS REG+ Sbjct: 155 LVSPREGS 162>XP_006711960 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 199 EKEGAF 204>XP_005263910 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EREGAF 9 E+EGAF Sbjct: 199 EKEGAF 204Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.136 0.352 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 565,908 Number of extensions: 749 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |