Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 19 665 NP_004561 19 665 NP_001275703 19 665 XP_005253450 19 665 XP_006719151 19 665 NP_056380 18 1935 NP_055437 17 3301 NP_001123614 17 3301 NP_055059 16 5631 NP_057728 16 5631 NP_631894 16 5631 NP_542453 16 5631 NP_067610 16 5631 NP_055058 16 5631 XP_005272069 16 5631 XP_005272068 16 5631 XP_005272067 16 5631 NP_001244118 16 7355 NP_001018011 16 7355 NP_064703 16 7355 NP_061955 16 7355 NP_005997 16 7355 XP_006725230 16 7355 XP_006720283 16 7355 XP_006719813 16 7355 XP_005271715 16 7355 XP_006718962 16 7355 XP_006713774 16 7355 XP_005247708 16 7355 XP_005247704 16 7355 XP_006713773 16 7355 NP_065869 16 7355 NP_005017 15 9605 NP_001186308 15 9605 NP_689967 15 9605 NP_001186307 15 9605 NP_001161707 15 9605 NP_004184 15 9605 XP_006718114 15 9605 XP_005270318 15 9605 XP_006718113 15 9605 XP_006718112 15 9605 XP_006718111 15 9605 XP_006718110 15 9605 XP_006710753 15 9605 XP_005263530 15 9605 XP_006710752 15 9605 XP_006710751 15 9605 XP_006710750 15 9605 XP_006710749 15 9605>NP_001275701 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 LVQLL HRS Sbjct: 815 LVQLLLHRS 823>NP_004561 Length = 1445 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 LVQLL HRS Sbjct: 774 LVQLLLHRS 782>NP_001275703 Length = 1264 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 LVQLL HRS Sbjct: 593 LVQLLLHRS 601>XP_005253450 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 LVQLL HRS Sbjct: 815 LVQLLLHRS 823>XP_006719151 Length = 1486 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 LVQLL HRS Sbjct: 815 LVQLLLHRS 823>NP_056380 Length = 1812 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LVQLLFHRS 9 L+QLLF+RS Sbjct: 1119 LLQLLFNRS 1127>NP_055437 Length = 786 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LVQLLFHRS 9 LVQL++H++ Sbjct: 681 LVQLIYHQN 689>NP_001123614 Length = 786 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LVQLLFHRS 9 LVQL++H++ Sbjct: 681 LVQLIYHQN 689>NP_055059 Length = 1211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQLLFHR 8 LVQ FHR Sbjct: 438 LVQAAFHR 445>NP_057728 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQLLFHR 8 VQLL HR Sbjct: 161 VQLLMHR 167>NP_631894 Length = 1226 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQLLFHR 8 LVQ FHR Sbjct: 431 LVQAAFHR 438>NP_542453 Length = 1223 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQLLFHR 8 LVQ FHR Sbjct: 428 LVQAAFHR 435>NP_067610 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQLLFHR 8 LVQ FHR Sbjct: 438 LVQAAFHR 445>NP_055058 Length = 1205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQLLFHR 8 LVQ FHR Sbjct: 428 LVQAAFHR 435>XP_005272069 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQLLFHR 8 VQLL HR Sbjct: 114 VQLLMHR 120>XP_005272068 Length = 255 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQLLFHR 8 VQLL HR Sbjct: 135 VQLLMHR 141>XP_005272067 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VQLLFHR 8 VQLL HR Sbjct: 184 VQLLMHR 190>NP_001244118 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 ++QLL HR Sbjct: 65 MLQLLLHR 72>NP_001018011 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 + ++LFHR+ Sbjct: 58 MFEILFHRN 66>NP_064703 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QLLFHR 8 Q+LFHR Sbjct: 108 QVLFHR 113>NP_061955 Length = 547 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 ++QLL HR Sbjct: 65 MLQLLLHR 72>NP_005997 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 + ++LFHR+ Sbjct: 58 MFEILFHRN 66>XP_006725230 Length = 2636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VQLLFH 7 VQ+LFH Sbjct: 275 VQMLFH 280>XP_006720283 Length = 2636 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VQLLFH 7 VQ+LFH Sbjct: 275 VQMLFH 280>XP_006719813 Length = 190 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LLFHRS 9 L+FHRS Sbjct: 178 LMFHRS 183>XP_005271715 Length = 485 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 + ++LFHR+ Sbjct: 58 MFEILFHRN 66>XP_006718962 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LVQLLFHRS 9 + ++LFHR+ Sbjct: 58 MFEILFHRN 66>XP_006713774 Length = 232 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QLLFHR 8 Q+LFHR Sbjct: 108 QVLFHR 113>XP_005247708 Length = 232 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QLLFHR 8 Q+LFHR Sbjct: 108 QVLFHR 113>XP_005247704 Length = 428 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QLLFHR 8 Q+LFHR Sbjct: 108 QVLFHR 113>XP_006713773 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 QLLFHR 8 Q+LFHR Sbjct: 108 QVLFHR 113>NP_065869 Length = 2458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VQLLFH 7 VQ+LFH Sbjct: 97 VQMLFH 102>NP_005017 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QLLFHRS 9 QLL+HR+ Sbjct: 47 QLLWHRA 53>NP_001186308 Length = 1855 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>NP_689967 Length = 777 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVQLLFHR 8 LVQL HR Sbjct: 526 LVQLSLHR 533>NP_001186307 Length = 1856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>NP_001161707 Length = 2139 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LVQLLFH 7 +VQL FH Sbjct: 669 MVQLAFH 675>NP_004184 Length = 1859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>XP_006718114 Length = 1850 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>XP_005270318 Length = 1860 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>XP_006718113 Length = 1881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>XP_006718112 Length = 1889 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>XP_006718111 Length = 1892 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>XP_006718110 Length = 1893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVQLLFHR 8 +VQLLF R Sbjct: 188 MVQLLFTR 195>XP_006710753 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QLLFHRS 9 QLL+HR+ Sbjct: 47 QLLWHRA 53>XP_005263530 Length = 1043 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QLLFHRS 9 QLL+HR+ Sbjct: 47 QLLWHRA 53>XP_006710752 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QLLFHRS 9 QLL+HR+ Sbjct: 47 QLLWHRA 53>XP_006710751 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QLLFHRS 9 QLL+HR+ Sbjct: 47 QLLWHRA 53>XP_006710750 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QLLFHRS 9 QLL+HR+ Sbjct: 47 QLLWHRA 53>XP_006710749 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QLLFHRS 9 QLL+HR+ Sbjct: 47 QLLWHRA 53Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.347 0.151 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 525,271 Number of extensions: 728 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |