Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001268421                                                           20     390
NP_000170                                                              20     390
NP_001268422                                                           20     390
NP_001268423                                                           20     390
XP_005264328                                                           20     390
NP_085135                                                              18    1935
XP_005258413                                                           18    1935
NP_065857                                                              17    3301
NP_001019389                                                           17    3301
NP_001229277                                                           17    3301
XP_006726566                                                           17    3301
XP_005267311                                                           17    3301
XP_005267310                                                           17    3301
XP_005267307                                                           17    3301
XP_006720066                                                           17    3301
XP_006717411                                                           17    3301
XP_006710279                                                           17    3301
NP_005871                                                              16    5631
NP_001274420                                                           16    5631
NP_001137290                                                           16    5631
NP_002566                                                              16    5631
NP_001092275                                                           16    5631
NP_001012421                                                           16    5631
NP_001012419                                                           16    5631
XP_005272589                                                           16    5631
XP_005272582                                                           16    5631
XP_005272576                                                           16    5631
XP_006712026                                                           16    5631
XP_005264244                                                           16    5631
NP_115626                                                              16    5631
NP_001139                                                              16    7355
NP_006717                                                              16    7355
NP_001186211                                                           16    7355
NP_065996                                                              16    7355
NP_060009                                                              16    7355
XP_006726609                                                           16    7355
XP_006721125                                                           16    7355
XP_006719787                                                           16    7355
XP_005270063                                                           16    7355
XP_005270062                                                           16    7355
XP_005270061                                                           16    7355
XP_005263433                                                           16    7355
XP_005263432                                                           16    7355
XP_005263431                                                           16    7355
XP_006714492                                                           16    7355
XP_005263430                                                           16    7355
XP_005263429                                                           16    7355
XP_006714257                                                           16    7355
XP_005263002                                                           16    7355
XP_005262999                                                           16    7355
XP_006714252                                                           16    7355
XP_006714251                                                           16    7355
XP_006714250                                                           16    7355
XP_006710027                                                           16    7355
NP_065107                                                              15    9605
NP_060404                                                              15    9605
NP_006552                                                              15    9605
NP_689785                                                              15    9605
NP_065944                                                              15    9605
NP_036442                                                              15    9605
NP_037407                                                              15    9605
NP_001120795                                                           15    9605
NP_001243112                                                           15    9605
NP_001243111                                                           15    9605
NP_001257978                                                           15    9605
NP_001020774                                                           15    9605
NP_071938                                                              15    9605
NP_000440                                                              15    9605
XP_006721247                                                           15    9605
XP_006721246                                                           15    9605
XP_006721245                                                           15    9605
XP_006721244                                                           15    9605
XP_005255557                                                           15    9605
XP_005253773                                                           15    9605
XP_006717432                                                           15    9605
XP_006717028                                                           15    9605
XP_006717027                                                           15    9605
XP_005272226                                                           15    9605
XP_006716001                                                           15    9605
XP_005248786                                                           15    9605
XP_006712418                                                           15    9605
XP_006712417                                                           15    9605
XP_006712416                                                           15    9605
XP_006712415                                                           15    9605
XP_006712414                                                           15    9605
XP_006712413                                                           15    9605
XP_006712412                                                           15    9605
XP_005245463                                                           15    9605
XP_005245462                                                           15    9605
NP_001092763                                                           15    9605
NP_000836                                                              15    9605
>NP_001268421
          Length = 1230

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LVPDKISEV 9
           +VPDKISEV
Sbjct: 670 VVPDKISEV 678
>NP_000170
          Length = 1360

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LVPDKISEV 9
           +VPDKISEV
Sbjct: 800 VVPDKISEV 808
>NP_001268422
          Length = 1058

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LVPDKISEV 9
           +VPDKISEV
Sbjct: 498 VVPDKISEV 506
>NP_001268423
          Length = 1058

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LVPDKISEV 9
           +VPDKISEV
Sbjct: 498 VVPDKISEV 506
>XP_005264328
          Length = 1261

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   LVPDKISEV 9
           +VPDKISEV
Sbjct: 701 VVPDKISEV 709
>NP_085135
          Length = 2248

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    LVPDKISE 8
            LVPDK++E
Sbjct: 1564 LVPDKLNE 1571
>XP_005258413
          Length = 2249

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1    LVPDKISE 8
            LVPDK++E
Sbjct: 1565 LVPDKLNE 1572
>NP_065857
          Length = 769

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  LVPDKISEV 9
          +VPD+I E+
Sbjct: 58 IVPDEIEEI 66
>NP_001019389
          Length = 736

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  LVPDKISEV 9
          +VPD+I E+
Sbjct: 58 IVPDEIEEI 66
>NP_001229277
          Length = 104

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1  LVPDKIS 7
          LVPDK+S
Sbjct: 44 LVPDKLS 50
>XP_006726566
          Length = 963

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LVPDKISEV 9
           L+PD +SEV
Sbjct: 389 LLPDPLSEV 397
>XP_005267311
          Length = 755

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  LVPDKISEV 9
          +VPD+I E+
Sbjct: 58 IVPDEIEEI 66
>XP_005267310
          Length = 769

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  LVPDKISEV 9
          +VPD+I E+
Sbjct: 58 IVPDEIEEI 66
>XP_005267307
          Length = 788

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  LVPDKISEV 9
          +VPD+I E+
Sbjct: 58 IVPDEIEEI 66
>XP_006720066
          Length = 802

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1  LVPDKISEV 9
          +VPD+I E+
Sbjct: 58 IVPDEIEEI 66
>XP_006717411
          Length = 963

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LVPDKISEV 9
           L+PD +SEV
Sbjct: 389 LLPDPLSEV 397
>XP_006710279
          Length = 963

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LVPDKISEV 9
           L+PD +SEV
Sbjct: 389 LLPDPLSEV 397
>NP_005871
          Length = 412

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   PDKISEV 9
           PDK+SE+
Sbjct: 345 PDKLSEL 351
>NP_001274420
          Length = 1795

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    LVPDKIS 7
            +VPDK+S
Sbjct: 1467 IVPDKLS 1473
>NP_001137290
          Length = 415

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   LVPDKISEV 9
           L+PD+I++V
Sbjct: 267 LLPDEIADV 275
>NP_002566
          Length = 415

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   LVPDKISEV 9
           L+PD+I++V
Sbjct: 267 LLPDEIADV 275
>NP_001092275
          Length = 823

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VPDKISE 8
           VP+K+SE
Sbjct: 301 VPEKVSE 307
>NP_001012421
          Length = 823

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VPDKISE 8
           VP+K+SE
Sbjct: 301 VPEKVSE 307
>NP_001012419
          Length = 823

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VPDKISE 8
           VP+K+SE
Sbjct: 301 VPEKVSE 307
>XP_005272589
          Length = 822

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VPDKISE 8
           VP+K+SE
Sbjct: 300 VPEKVSE 306
>XP_005272582
          Length = 822

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VPDKISE 8
           VP+K+SE
Sbjct: 300 VPEKVSE 306
>XP_005272576
          Length = 822

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VPDKISE 8
           VP+K+SE
Sbjct: 300 VPEKVSE 306
>XP_006712026
          Length = 937

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LVPDKIS 7
           +VPDK+S
Sbjct: 609 IVPDKLS 615
>XP_005264244
          Length = 1795

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    LVPDKIS 7
            +VPDK+S
Sbjct: 1467 IVPDKLS 1473
>NP_115626
          Length = 823

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   VPDKISE 8
           VP+K+SE
Sbjct: 301 VPEKVSE 307
>NP_001139
          Length = 3957

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LVPDKISE 8
            L+PD +SE
Sbjct: 3181 LLPDDVSE 3188
>NP_006717
          Length = 2863

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1634 PDAISEV 1640
>NP_001186211
          Length = 2851

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1634 PDAISEV 1640
>NP_065996
          Length = 3184

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LVPDKISEV 9
            L+P KIS +
Sbjct: 1522 LIPSKISTI 1530
>NP_060009
          Length = 4116

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VPDKISEV 9
           + DK+SEV
Sbjct: 708 IADKVSEV 715
>XP_006726609
          Length = 2838

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    LVPDKISE 8
            L+P+KI+E
Sbjct: 1274 LLPEKINE 1281
>XP_006721125
          Length = 4070

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VPDKISEV 9
           + DK+SEV
Sbjct: 648 IADKVSEV 655
>XP_006719787
          Length = 2838

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    LVPDKISE 8
            L+P+KI+E
Sbjct: 1274 LLPEKINE 1281
>XP_005270063
          Length = 2005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LVPDKISEV 9
            L+P KIS +
Sbjct: 1522 LIPSKISTI 1530
>XP_005270062
          Length = 3184

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LVPDKISEV 9
            L+P KIS +
Sbjct: 1522 LIPSKISTI 1530
>XP_005270061
          Length = 3184

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    LVPDKISEV 9
            L+P KIS +
Sbjct: 1522 LIPSKISTI 1530
>XP_005263433
          Length = 2832

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1598 PDAISEV 1604
>XP_005263432
          Length = 2852

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1634 PDAISEV 1640
>XP_005263431
          Length = 2857

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1634 PDAISEV 1640
>XP_006714492
          Length = 2867

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1634 PDAISEV 1640
>XP_005263430
          Length = 2868

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1634 PDAISEV 1640
>XP_005263429
          Length = 2868

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    PDKISEV 9
            PD ISEV
Sbjct: 1634 PDAISEV 1640
>XP_006714257
          Length = 4145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LVPDKISE 8
            L+PD +SE
Sbjct: 3190 LLPDDVSE 3197
>XP_005263002
          Length = 4072

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LVPDKISE 8
            L+PD +SE
Sbjct: 3148 LLPDDVSE 3155
>XP_005262999
          Length = 4147

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LVPDKISE 8
            L+PD +SE
Sbjct: 3192 LLPDDVSE 3199
>XP_006714252
          Length = 4153

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LVPDKISE 8
            L+PD +SE
Sbjct: 3198 LLPDDVSE 3205
>XP_006714251
          Length = 4165

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LVPDKISE 8
            L+PD +SE
Sbjct: 3210 LLPDDVSE 3217
>XP_006714250
          Length = 4190

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LVPDKISE 8
            L+PD +SE
Sbjct: 3235 LLPDDVSE 3242
>XP_006710027
          Length = 2837

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1    LVPDKISE 8
            L+P+KI+E
Sbjct: 1273 LLPEKINE 1280
>NP_065107
          Length = 552

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LVPDKISE 8
           LVP  ISE
Sbjct: 519 LVPQSISE 526
>NP_060404
          Length = 1821

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   PDKISEV 9
           P+KISE+
Sbjct: 355 PEKISEL 361
>NP_006552
          Length = 521

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LVPDKIS 7
          LVPD+I+
Sbjct: 20 LVPDRIN 26
>NP_689785
          Length = 479

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LVPDKISEV 9
           +VP+ ISE+
Sbjct: 205 MVPEDISEL 213
>NP_065944
          Length = 1701

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LVPDKIS 7
           +VP+KIS
Sbjct: 160 IVPEKIS 166
>NP_036442
          Length = 1232

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  LVPDKISE 8
          LVP +ISE
Sbjct: 19 LVPKEISE 26
>NP_037407
          Length = 2663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    DKISEV 9
            DKISEV
Sbjct: 1298 DKISEV 1303
>NP_001120795
          Length = 908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   PDKISEV 9
           PDKIS V
Sbjct: 144 PDKISGV 150
>NP_001243112
          Length = 2663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    DKISEV 9
            DKISEV
Sbjct: 1298 DKISEV 1303
>NP_001243111
          Length = 2663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    DKISEV 9
            DKISEV
Sbjct: 1298 DKISEV 1303
>NP_001257978
          Length = 840

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 557 LVPIKSSEV 565
>NP_001020774
          Length = 616

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K+S +
Sbjct: 560 LVPSKVSVI 568
>NP_071938
          Length = 476

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LVPDKISEV 9
           L PDKI  V
Sbjct: 233 LTPDKIYHV 241
>NP_000440
          Length = 616

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K+S +
Sbjct: 560 LVPSKVSVI 568
>XP_006721247
          Length = 2564

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    DKISEV 9
            DKISEV
Sbjct: 1199 DKISEV 1204
>XP_006721246
          Length = 2620

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    DKISEV 9
            DKISEV
Sbjct: 1255 DKISEV 1260
>XP_006721245
          Length = 2629

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    DKISEV 9
            DKISEV
Sbjct: 1264 DKISEV 1269
>XP_006721244
          Length = 2629

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4    DKISEV 9
            DKISEV
Sbjct: 1264 DKISEV 1269
>XP_005255557
          Length = 374

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   LVPDKISEV 9
           L PDKI  V
Sbjct: 131 LTPDKIYHV 139
>XP_005253773
          Length = 509

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   LVPDKISE 8
           LVP  ISE
Sbjct: 476 LVPQSISE 483
>XP_006717432
          Length = 525

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LVPDKIS 7
          LVPD+I+
Sbjct: 20 LVPDRIN 26
>XP_006717028
          Length = 407

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LVPDKISEV 9
           +VP+ ISE+
Sbjct: 133 MVPEDISEL 141
>XP_006717027
          Length = 434

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LVPDKISEV 9
           +VP+ ISE+
Sbjct: 160 MVPEDISEL 168
>XP_005272226
          Length = 491

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LVPDKISEV 9
           +VP+ ISE+
Sbjct: 217 MVPEDISEL 225
>XP_006716001
          Length = 908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   PDKISEV 9
           PDKIS V
Sbjct: 144 PDKISGV 150
>XP_005248786
          Length = 1820

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   PDKISEV 9
           P+KISE+
Sbjct: 355 PEKISEL 361
>XP_006712418
          Length = 611

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 272 LVPIKSSEV 280
>XP_006712417
          Length = 735

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 396 LVPIKSSEV 404
>XP_006712416
          Length = 840

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 557 LVPIKSSEV 565
>XP_006712415
          Length = 894

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 555 LVPIKSSEV 563
>XP_006712414
          Length = 896

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 557 LVPIKSSEV 565
>XP_006712413
          Length = 896

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 557 LVPIKSSEV 565
>XP_006712412
          Length = 896

 Score = 15.4 bits (28), Expect =  9605
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K SEV
Sbjct: 557 LVPIKSSEV 565
>XP_005245463
          Length = 616

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K+S +
Sbjct: 560 LVPSKVSVI 568
>XP_005245462
          Length = 616

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   LVPDKISEV 9
           LVP K+S +
Sbjct: 560 LVPSKVSVI 568
>NP_001092763
          Length = 1234

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  LVPDKISE 8
          LVP +ISE
Sbjct: 19 LVPKEISE 26
>NP_000836
          Length = 908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   PDKISEV 9
           PDKIS V
Sbjct: 144 PDKISGV 150
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.311    0.137    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 658,672
Number of extensions: 789
Number of successful extensions: 91
Number of sequences better than 10000.0: 91
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 91
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package