Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_056259 19 869 NP_001155130 18 1135 NP_001155131 18 1135 NP_001155132 18 1135 NP_001155128 18 1135 NP_001155129 18 1135 NP_001123644 18 1135 NP_001123645 18 1135 NP_005366 18 1135 XP_006715558 18 1135 NP_000737 17 2528 NP_001177384 17 2528 NP_683709 17 2528 NP_647536 17 2528 NP_848934 17 2528 XP_005276529 17 2528 XP_006725626 17 2528 XP_005254807 17 2528 XP_005253668 17 2528 XP_005253667 17 2528 XP_005253666 17 2528 NP_076417 17 2528 NP_857595 17 3301 NP_004646 17 4312 XP_005257776 17 4312 NP_004930 16 5631 NP_077008 16 5631 NP_001019195 16 5631 NP_000152 16 5631 NP_001019242 16 5631 NP_001019241 16 5631 NP_001273370 16 5631 NP_004382 16 5631 NP_689809 16 5631 XP_006720478 16 5631 XP_005267587 16 5631 NP_775908 16 5631 NP_003493 16 7355 NP_851393 16 7355 NP_037513 16 7355 NP_001001665 16 7355 NP_001188505 16 7355 NP_065093 16 7355 NP_002340 16 7355 NP_689942 16 7355 NP_001185688 16 7355 NP_001185689 16 7355 XP_005255667 16 7355 XP_005255666 16 7355 XP_005255665 16 7355 XP_005255664 16 7355 XP_006712546 16 7355 NP_001095856 16 7355 NP_000008 15 9605 NP_001121188 15 9605 NP_000117 15 9605 NP_064541 15 9605 NP_694996 15 9605 NP_057258 15 9605 NP_057133 15 9605 NP_689749 15 9605 NP_653262 15 9605 NP_001096121 15 9605 NP_001273689 15 9605 NP_001265227 15 9605 NP_001165339 15 9605 NP_001003682 15 9605 XP_006724224 15 9605 XP_006722697 15 9605 XP_005267778 15 9605 XP_005269614 15 9605 XP_006717703 15 9605 XP_006717702 15 9605 XP_005269613 15 9605 XP_005252094 15 9605 XP_006717200 15 9605 XP_005252092 15 9605 XP_006715822 15 9605 XP_005249870 15 9605 XP_005249869 15 9605 XP_005264958 15 9605 XP_005264957 15 9605 NP_872333 15 9605 NP_006373 15 9605>NP_056259 Length = 300 Score = 18.9 bits (37), Expect = 869 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VIAGYLPN 9 +IAG+LPN Sbjct: 247 IIAGFLPN 254>NP_001155130 Length = 745 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_001155131 Length = 603 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_001155132 Length = 605 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_001155128 Length = 758 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_001155129 Length = 555 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_001123644 Length = 637 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_001123645 Length = 761 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_005366 Length = 640 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>XP_006715558 Length = 449 Score = 18.5 bits (36), Expect = 1135 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 VIA YLPN Sbjct: 65 VIANYLPN 72>NP_000737 Length = 502 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 I+GY+PN Sbjct: 187 ISGYIPN 193>NP_001177384 Length = 531 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 I+GY+PN Sbjct: 216 ISGYIPN 222>NP_683709 Length = 321 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 I+GY+PN Sbjct: 6 ISGYIPN 12>NP_647536 Length = 412 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 I+GY+PN Sbjct: 97 ISGYIPN 103>NP_848934 Length = 456 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IAGYLPN 9 + GYLPN Sbjct: 196 VVGYLPN 202>XP_005276529 Length = 412 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 I+GY+PN Sbjct: 97 ISGYIPN 103>XP_006725626 Length = 290 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 I+GY+PN Sbjct: 97 ISGYIPN 103>XP_005254807 Length = 321 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 I+GY+PN Sbjct: 6 ISGYIPN 12>XP_005253668 Length = 420 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IAGYLPN 9 + GYLPN Sbjct: 156 VVGYLPN 162>XP_005253667 Length = 599 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IAGYLPN 9 + GYLPN Sbjct: 156 VVGYLPN 162>XP_005253666 Length = 631 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IAGYLPN 9 + GYLPN Sbjct: 156 VVGYLPN 162>NP_076417 Length = 672 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 IAGYLPN 9 + GYLPN Sbjct: 156 VVGYLPN 162>NP_857595 Length = 514 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IAGYLPN 9 +AGYLP+ Sbjct: 347 VAGYLPS 353>NP_004646 Length = 843 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VIAGYLP 8 V+ GYLP Sbjct: 220 VVCGYLP 226>XP_005257776 Length = 778 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VIAGYLP 8 V+ GYLP Sbjct: 220 VVCGYLP 226>NP_004930 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 730 GYLPN 734>NP_077008 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 337 GYLPN 341>NP_001019195 Length = 250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 155 GYLPN 159>NP_000152 Length = 250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 155 GYLPN 159>NP_001019242 Length = 213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 155 GYLPN 159>NP_001019241 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 155 GYLPN 159>NP_001273370 Length = 572 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 253 GYLPN 257>NP_004382 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LVIAGYL 7 +VIAGYL Sbjct: 13 VVIAGYL 19>NP_689809 Length = 514 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 195 GYLPN 199>XP_006720478 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 230 GYLPN 234>XP_005267587 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 155 GYLPN 159>NP_775908 Length = 370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GYLPN Sbjct: 244 GYLPN 248>NP_003493 Length = 862 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 I+GYLP Sbjct: 234 ISGYLP 239>NP_851393 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 I+GYLP Sbjct: 234 ISGYLP 239>NP_037513 Length = 1024 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVIAGYLP 8 L AGYLP Sbjct: 727 LARAGYLP 734>NP_001001665 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LVIAGYL 7 LVI GYL Sbjct: 256 LVIGGYL 262>NP_001188505 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 +AGYLP Sbjct: 1 MAGYLP 6>NP_065093 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 +AGYLP Sbjct: 1 MAGYLP 6>NP_002340 Length = 1722 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGYLPN 9 AG+LPN Sbjct: 363 AGWLPN 368>NP_689942 Length = 455 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 AGYLPN 9 AGY PN Sbjct: 436 AGYYPN 441>NP_001185688 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGYLPN 9 AG+LPN Sbjct: 363 AGWLPN 368>NP_001185689 Length = 1817 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGYLPN 9 AG+LPN Sbjct: 363 AGWLPN 368>XP_005255667 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 I+GYLP Sbjct: 283 ISGYLP 288>XP_005255666 Length = 862 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 I+GYLP Sbjct: 234 ISGYLP 239>XP_005255665 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 I+GYLP Sbjct: 283 ISGYLP 288>XP_005255664 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 I+GYLP Sbjct: 283 ISGYLP 288>XP_006712546 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LVIAGYL 7 LVI GYL Sbjct: 331 LVIGGYL 337>NP_001095856 Length = 354 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVIAGYLPN 9 + +GY+PN Sbjct: 162 ITASGYVPN 170>NP_000008 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LVIAGYL 7 LVIAG+L Sbjct: 400 LVIAGHL 406>NP_001121188 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 V AG++PN Sbjct: 203 VDAGFVPN 210>NP_000117 Length = 333 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VIAGYLPN 9 V AG++PN Sbjct: 252 VDAGFVPN 259>NP_064541 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VIAGYLP 8 +I GYLP Sbjct: 275 LIKGYLP 281>NP_694996 Length = 2526 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GY+PN Sbjct: 2345 GYMPN 2349>NP_057258 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVIAGY 6 LV+AGY Sbjct: 465 LVVAGY 470>NP_057133 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVIAGY 6 LV+AGY Sbjct: 76 LVVAGY 81>NP_689749 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 +AGY+P Sbjct: 489 VAGYVP 494>NP_653262 Length = 154 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AGYLP 8 AGYLP Sbjct: 109 AGYLP 113>NP_001096121 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AGYLP 8 AGYLP Sbjct: 34 AGYLP 38>NP_001273689 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVIAGY 6 LV+AGY Sbjct: 387 LVVAGY 392>NP_001265227 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GY+PN Sbjct: 2345 GYMPN 2349>NP_001165339 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVIAGYLPN 9 + +AGY P+ Sbjct: 69 IAVAGYWPH 77>NP_001003682 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVIAGYLPN 9 + +AGY P+ Sbjct: 69 IAVAGYWPH 77>XP_006724224 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GY+PN Sbjct: 66 GYMPN 70>XP_006722697 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AGYLP 8 AGYLP Sbjct: 34 AGYLP 38>XP_005267778 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVIAGY 6 LV+AGY Sbjct: 76 LVVAGY 81>XP_005269614 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AGYLP 8 AGYLP Sbjct: 109 AGYLP 113>XP_006717703 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AGYLP 8 AGYLP Sbjct: 109 AGYLP 113>XP_006717702 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AGYLP 8 AGYLP Sbjct: 109 AGYLP 113>XP_005269613 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 AGYLP 8 AGYLP Sbjct: 109 AGYLP 113>XP_005252094 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVIAGY 6 LV+AGY Sbjct: 387 LVVAGY 392>XP_006717200 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVIAGY 6 LV+AGY Sbjct: 387 LVVAGY 392>XP_005252092 Length = 595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVIAGY 6 LV+AGY Sbjct: 465 LVVAGY 470>XP_006715822 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VIAGYLP 8 +I GYLP Sbjct: 275 LIKGYLP 281>XP_005249870 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VIAGYLP 8 +I GYLP Sbjct: 275 LIKGYLP 281>XP_005249869 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VIAGYLP 8 +I GYLP Sbjct: 283 LIKGYLP 289>XP_005264958 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 +AGY+P Sbjct: 532 VAGYVP 537>XP_005264957 Length = 1505 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 IAGYLP 8 +AGY+P Sbjct: 532 VAGYVP 537>NP_872333 Length = 215 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 5 GYLPN 9 GY+PN Sbjct: 66 GYMPN 70>NP_006373 Length = 752 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LVIAGYLP 8 L IAG+LP Sbjct: 710 LHIAGHLP 717Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.153 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 611,265 Number of extensions: 1133 Number of successful extensions: 84 Number of sequences better than 10000.0: 84 Number of HSP's gapped: 84 Number of HSP's successfully gapped: 84 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |