Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245202 18 1935 NP_001245200 18 1935 NP_001161091 18 1935 NP_000240 18 1935 NP_001161090 18 1935 NP_001161089 18 1935 NP_001245203 18 1935 XP_005265221 18 1935 XP_005265220 18 1935 NP_001243000 16 7355 NP_001008781 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_006718827 16 7355 NP_001243888 15 9605 NP_001277 15 9605 NP_001107604 15 9605 NP_006257 15 9605 NP_001035827 15 9605 NP_001258705 15 9605 NP_001258704 15 9605 NP_001258703 15 9605 XP_006712765 15 9605 XP_006712764 15 9605 XP_005246844 15 9605 XP_006712763 15 9605 XP_006712762 15 9605 XP_006712761 15 9605>NP_001245202 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 25 LVESTSLRK 33>NP_001245200 Length = 687 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 266 LVESTSLRK 274>NP_001161091 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 25 LVESTSLRK 33>NP_000240 Length = 756 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 266 LVESTSLRK 274>NP_001161090 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 25 LVESTSLRK 33>NP_001161089 Length = 658 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 168 LVESTSLRK 176>NP_001245203 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 25 LVESTSLRK 33>XP_005265221 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 25 LVESTSLRK 33>XP_005265220 Length = 515 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 LVES SLRK Sbjct: 25 LVESTSLRK 33>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LVESISL 7 LVESISL Sbjct: 2601 LVESISL 2607>NP_001008781 Length = 4557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VESISLRK 9 ++SIS+RK Sbjct: 1501 IDSISMRK 1508>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LVESISL 7 LVESISL Sbjct: 2650 LVESISL 2656>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LVESISL 7 LVESISL Sbjct: 2650 LVESISL 2656>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LVESISL 7 LVESISL Sbjct: 2650 LVESISL 2656>XP_006718827 Length = 3479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VESISLRK 9 ++SIS+RK Sbjct: 391 IDSISMRK 398>NP_001243888 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESISLRK 9 +SISLRK Sbjct: 196 QSISLRK 202>NP_001277 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ESISLRK 9 +SISLRK Sbjct: 218 QSISLRK 224>NP_001107604 Length = 2694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVESISLRK 9 L+E +SL K Sbjct: 983 LIEQVSLEK 991>NP_006257 Length = 914 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 ++ SISLRK Sbjct: 75 VIYSISLRK 83>NP_001035827 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 ++ SISLRK Sbjct: 20 VIYSISLRK 28>NP_001258705 Length = 902 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 ++ SISLRK Sbjct: 75 VIYSISLRK 83>NP_001258704 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 ++ SISLRK Sbjct: 74 VIYSISLRK 82>NP_001258703 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LVESISLRK 9 ++ SISLRK Sbjct: 58 VIYSISLRK 66>XP_006712765 Length = 2679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVESISLRK 9 L+E +SL K Sbjct: 955 LIEQVSLEK 963>XP_006712764 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVESISLRK 9 L+E +SL K Sbjct: 1012 LIEQVSLEK 1020>XP_005246844 Length = 2707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVESISLRK 9 L+E +SL K Sbjct: 983 LIEQVSLEK 991>XP_006712763 Length = 2716 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVESISLRK 9 L+E +SL K Sbjct: 1012 LIEQVSLEK 1020>XP_006712762 Length = 2723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVESISLRK 9 L+E +SL K Sbjct: 1012 LIEQVSLEK 1020>XP_006712761 Length = 2736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LVESISLRK 9 L+E +SL K Sbjct: 1012 LIEQVSLEK 1020Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.133 0.295 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 287,366 Number of extensions: 247 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |