Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 509 NP_001156602 17 3301 NP_001030008 17 3301 NP_663629 17 3301 NP_001156593 17 3301 NP_001156594 17 3301 NP_001161067 17 4312 NP_055139 17 4312 NP_005602 16 5631 NP_148936 16 5631 NP_001245390 16 5631 NP_006703 16 5631 XP_005256140 16 5631 XP_005249990 16 5631 XP_005249989 16 5631 NP_062553 16 7355 NP_899662 16 7355 NP_002886 16 7355 NP_060625 16 7355 XP_006723905 16 7355 NP_001098117 16 7355 NP_861420 15 9605 NP_005516 15 9605 NP_001193670 15 9605 NP_001257903 15 9605 NP_689777 15 9605 NP_055919 15 9605 NP_060360 15 9605 NP_001171652 15 9605 NP_056058 15 9605 NP_620141 15 9605 XP_006724219 15 9605 XP_006724218 15 9605 XP_006724217 15 9605 XP_006721269 15 9605 XP_005273907 15 9605 XP_005273906 15 9605 XP_006716574 15 9605 XP_006716573 15 9605 XP_005250858 15 9605 XP_005250857 15 9605 XP_005270933 15 9605 NP_071441 15 9605 NP_689726 15 9605>NP_000312 Length = 928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LVCALEVVM 9 L CALEVVM Sbjct: 487 LACALEVVM 495>NP_001156602 Length = 261 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 CALEVV+ Sbjct: 138 CALEVVL 144>NP_001030008 Length = 236 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 CALEVV+ Sbjct: 161 CALEVVL 167>NP_663629 Length = 284 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 CALEVV+ Sbjct: 161 CALEVVL 167>NP_001156593 Length = 251 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 CALEVV+ Sbjct: 161 CALEVVL 167>NP_001156594 Length = 228 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 CALEVV+ Sbjct: 138 CALEVVL 144>NP_001161067 Length = 394 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVCALEVVM 9 L+CAL ++M Sbjct: 158 LMCALGIIM 166>NP_055139 Length = 382 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LVCALEVVM 9 L+CAL ++M Sbjct: 158 LMCALGIIM 166>NP_005602 Length = 1139 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVCALEVV 8 L C LEVV Sbjct: 533 LACCLEVV 540>NP_148936 Length = 408 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVCALE 6 LVCALE Sbjct: 35 LVCALE 40>NP_001245390 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVCALE 6 LVCALE Sbjct: 176 LVCALE 181>NP_006703 Length = 549 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVCALE 6 LVCALE Sbjct: 176 LVCALE 181>XP_005256140 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVCALEVV 8 L C LEVV Sbjct: 459 LACCLEVV 466>XP_005249990 Length = 515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVCALE 6 LVCALE Sbjct: 142 LVCALE 147>XP_005249989 Length = 515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LVCALE 6 LVCALE Sbjct: 142 LVCALE 147>NP_062553 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 L+CALE Sbjct: 93 LICALE 98>NP_899662 Length = 1014 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVCALEVVM 9 + C LE+V+ Sbjct: 502 MACCLEIVL 510>NP_002886 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVCALEVVM 9 + C LE+V+ Sbjct: 502 MACCLEIVL 510>NP_060625 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVCALEVV 8 L C LEVV Sbjct: 23 LTCPLEVV 30>XP_006723905 Length = 896 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVCALEVVM 9 + C LE+V+ Sbjct: 330 MACCLEIVL 338>NP_001098117 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LVCALEVV 8 L C LEVV Sbjct: 23 LTCPLEVV 30>NP_861420 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CALEVV 8 CALE++ Sbjct: 241 CALEII 246>NP_005516 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CALEVV 8 CALE++ Sbjct: 241 CALEII 246>NP_001193670 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 3 CALEVV 8 CALE++ Sbjct: 241 CALEII 246>NP_001257903 Length = 5121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VCALEVV 8 VC LEV+ Sbjct: 4484 VCKLEVI 4490>NP_689777 Length = 3997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 +VCALE Sbjct: 598 IVCALE 603>NP_055919 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 C+LEV++ Sbjct: 811 CSLEVIL 817>NP_060360 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 +VCALE Sbjct: 598 IVCALE 603>NP_001171652 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVCALEVVM 9 ++C + VVM Sbjct: 174 IICLIRVVM 182>NP_056058 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 +VCALE Sbjct: 598 IVCALE 603>NP_620141 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LVCALEVVM 9 ++C + VVM Sbjct: 174 IICLIRVVM 182>XP_006724219 Length = 1157 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVCALEVV 8 L CALE++ Sbjct: 45 LACALELL 52>XP_006724218 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVCALEVV 8 L CALE++ Sbjct: 45 LACALELL 52>XP_006724217 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVCALEVV 8 L CALE++ Sbjct: 45 LACALELL 52>XP_006721269 Length = 5138 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VCALEVV 8 VC LEV+ Sbjct: 4501 VCKLEVI 4507>XP_005273907 Length = 1930 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 C+LEV++ Sbjct: 811 CSLEVIL 817>XP_005273906 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 CALEVVM 9 C+LEV++ Sbjct: 811 CSLEVIL 817>XP_006716574 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 +VCALE Sbjct: 598 IVCALE 603>XP_006716573 Length = 1776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 +VCALE Sbjct: 598 IVCALE 603>XP_005250858 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 +VCALE Sbjct: 598 IVCALE 603>XP_005250857 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LVCALE 6 +VCALE Sbjct: 598 IVCALE 603>XP_005270933 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LVCALEV 7 L+C+LEV Sbjct: 11 LMCSLEV 17>NP_071441 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 LVCALEVV 8 L C LE+V Sbjct: 203 LFCGLEIV 210>NP_689726 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LVCALEVV 8 L CALE++ Sbjct: 45 LACALELL 52Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.343 0.145 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 561,780 Number of extensions: 416 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |