Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 18 1135 XP_005262424 18 1135 NP_006246 16 5631 NP_001265596 16 5631 NP_057361 16 5631 NP_899050 16 5631 NP_001265597 16 5631 NP_001265595 16 5631 XP_005252323 16 5631 XP_005252322 16 5631 XP_005252321 16 5631 XP_005252320 16 5631 XP_006713055 16 5631 NP_001092272 16 5631 NP_115547 16 5631 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_660337 16 7355 XP_006720926 16 7355 XP_006720925 16 7355 XP_006720924 16 7355 XP_006720923 16 7355 XP_005255218 16 7355 XP_005255217 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001001389 15 9605 NP_001001390 15 9605 NP_000601 15 9605 NP_001157281 15 9605 NP_001157145 15 9605 NP_689561 15 9605 NP_001157283 15 9605 NP_001138537 15 9605 NP_997374 15 9605 NP_056021 15 9605 NP_443152 15 9605 XP_006720504 15 9605 XP_005253297 15 9605 XP_005253296 15 9605 XP_005253295 15 9605 XP_005253292 15 9605 XP_005253291 15 9605 XP_005253290 15 9605 XP_006718452 15 9605 XP_006718451 15 9605 XP_005253289 15 9605 XP_005253288 15 9605 XP_006711992 15 9605>NP_722576 Length = 3080 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSSNRVGV 9 LTSSN VGV Sbjct: 1343 LTSSNTVGV 1351>XP_005262424 Length = 2875 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSSNRVGV 9 LTSSN VGV Sbjct: 1138 LTSSNTVGV 1146>NP_006246 Length = 683 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSSNRVGV 9 + SSNR+G+ Sbjct: 344 VNSSNRLGI 352>NP_001265596 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSSNRVGV 9 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_057361 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSSNRVGV 9 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_899050 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSSNRVGV 9 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_001265597 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSSNRVGV 9 +SSN++GV Sbjct: 186 SSSNKIGV 193>NP_001265595 Length = 237 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TSSNRVGV 9 +SSN++GV Sbjct: 186 SSSNKIGV 193>XP_005252323 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSN +GV Sbjct: 558 TSSNNLGV 565>XP_005252322 Length = 690 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSN +GV Sbjct: 629 TSSNNLGV 636>XP_005252321 Length = 696 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSN +GV Sbjct: 619 TSSNNLGV 626>XP_005252320 Length = 706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSN +GV Sbjct: 645 TSSNNLGV 652>XP_006713055 Length = 195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSSNRVGV 9 +TSS R GV Sbjct: 122 ITSSTRTGV 130>NP_001092272 Length = 722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSN +GV Sbjct: 645 TSSNNLGV 652>NP_115547 Length = 706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSN +GV Sbjct: 629 TSSNNLGV 636>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 8980 VTASNRLG 8987>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 9105 VTASNRLG 9112>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 16404 VTASNRLG 16411>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 15477 VTASNRLG 15484>NP_660337 Length = 1748 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSNRV V Sbjct: 904 TSSNRVVV 911>XP_006720926 Length = 1383 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSNRV V Sbjct: 905 TSSNRVVV 912>XP_006720925 Length = 1674 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSNRV V Sbjct: 905 TSSNRVVV 912>XP_006720924 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSNRV V Sbjct: 833 TSSNRVVV 840>XP_006720923 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSNRV V Sbjct: 905 TSSNRVVV 912>XP_005255218 Length = 1750 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSNRV V Sbjct: 904 TSSNRVVV 911>XP_005255217 Length = 1751 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 TSSNRV V Sbjct: 905 TSSNRVVV 912>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 4717 VTASNRLG 4724>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 6076 VTASNRLG 6083>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 16032 VTASNRLG 16039>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 17538 VTASNRLG 17545>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 18045 VTASNRLG 18052>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSSNRVG 8 +T+SNR+G Sbjct: 9172 VTASNRLG 9179>NP_001001389 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 489 LTSSNR 494>NP_001001390 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 283 LTSSNR 288>NP_000601 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 532 LTSSNR 537>NP_001157281 Length = 1941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 T SN++GV Sbjct: 1886 TVSNKIGV 1893>NP_001157145 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 T SN++GV Sbjct: 683 TVSNKIGV 690>NP_689561 Length = 890 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 T SN++GV Sbjct: 835 TVSNKIGV 842>NP_001157283 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 T SN++GV Sbjct: 659 TVSNKIGV 666>NP_001138537 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 +SSN VGV Sbjct: 34 SSSNTVGV 41>NP_997374 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSSNRVGV 9 +SSN VGV Sbjct: 34 SSSNTVGV 41>NP_056021 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSSNRVGV 9 +T +NRVG+ Sbjct: 736 ITYTNRVGL 744>NP_443152 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTSSNRVGV 9 LT+SN +GV Sbjct: 431 LTASNCLGV 439>XP_006720504 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTSSNRVGV 9 +T +NRVG+ Sbjct: 736 ITYTNRVGL 744>XP_005253297 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 325 LTSSNR 330>XP_005253296 Length = 578 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 368 LTSSNR 373>XP_005253295 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 370 LTSSNR 375>XP_005253292 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 490 LTSSNR 495>XP_005253291 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 492 LTSSNR 497>XP_005253290 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 493 LTSSNR 498>XP_006718452 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 525 LTSSNR 530>XP_006718451 Length = 741 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 531 LTSSNR 536>XP_005253289 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 532 LTSSNR 537>XP_005253288 Length = 743 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTSSNR 6 LTSSNR Sbjct: 533 LTSSNR 538>XP_006711992 Length = 875 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTSSNRVGV 9 LT+SN +GV Sbjct: 431 LTASNCLGV 439Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.122 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 344,884 Number of extensions: 400 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |