Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001073883 19 665 XP_005267748 19 665 NP_000258 19 869 NP_001035957 19 869 XP_006721990 19 869 XP_006721989 19 869 XP_005258041 19 869 XP_006721988 19 869 XP_006721987 19 869 XP_006721986 19 869 XP_005258040 19 869 XP_006721985 19 869 NP_001172003 17 2528 NP_001171988 17 2528 NP_078893 17 2528 XP_006717349 17 2528 XP_005252266 17 2528 XP_005252265 17 2528 XP_005252264 17 2528 XP_006717348 17 2528 XP_006717347 17 2528 XP_006717346 17 2528 XP_006710300 17 4312 NP_000532 16 5631 NP_065910 16 5631 NP_060594 16 5631 XP_006721290 16 5631 XP_005256079 16 5631 XP_005256078 16 5631 XP_005263222 16 5631 XP_005263221 16 5631 XP_005263220 16 5631 XP_006714345 16 5631 XP_005263219 16 5631 XP_005246157 16 5631 XP_005246156 16 5631 NP_002408 16 7355 NP_001139438 16 7355 NP_005364 16 7355 NP_056073 16 7355 XP_006717927 16 7355 XP_006717082 16 7355 XP_006717081 16 7355 NP_006531 15 9605 NP_001274152 15 9605 NP_775894 15 9605 NP_001124390 15 9605 NP_054858 15 9605 XP_006721892 15 9605 XP_006721891 15 9605 XP_006721890 15 9605 XP_005251190 15 9605 XP_005251188 15 9605 XP_005251189 15 9605 XP_005251187 15 9605 XP_005251186 15 9605 XP_005251185 15 9605 NP_060469 15 9605>NP_001073883 Length = 2028 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSLETATE 9 +TSLETATE Sbjct: 651 VTSLETATE 659>XP_005267748 Length = 1535 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTSLETATE 9 +TSLETATE Sbjct: 651 VTSLETATE 659>NP_000258 Length = 2818 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2178 LTSLETVTE 2186>NP_001035957 Length = 2839 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2199 LTSLETVTE 2207>XP_006721990 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2209 LTSLETVTE 2217>XP_006721989 Length = 2823 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2209 LTSLETVTE 2217>XP_005258041 Length = 2836 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2178 LTSLETVTE 2186>XP_006721988 Length = 2846 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2188 LTSLETVTE 2196>XP_006721987 Length = 2849 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2209 LTSLETVTE 2217>XP_006721986 Length = 2854 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2196 LTSLETVTE 2204>XP_005258040 Length = 2857 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2199 LTSLETVTE 2207>XP_006721985 Length = 2867 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET TE Sbjct: 2209 LTSLETVTE 2217>NP_001172003 Length = 1259 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>NP_001171988 Length = 1495 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>NP_078893 Length = 1495 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_006717349 Length = 1046 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_005252266 Length = 1046 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_005252265 Length = 1381 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_005252264 Length = 1478 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_006717348 Length = 1541 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_006717347 Length = 1541 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_006717346 Length = 1541 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSLET +E Sbjct: 159 LTSLETTSE 167>XP_006710300 Length = 1116 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTSLETATE 9 LTSL T+TE Sbjct: 475 LTSLVTSTE 483Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TSLETATE 9 TSL TATE Sbjct: 340 TSLITATE 347>NP_000532 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS E ATE Sbjct: 346 LTSSEVATE 354>NP_065910 Length = 1996 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSLETATE 9 +SLETAT+ Sbjct: 367 SSLETATD 374>NP_060594 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LTSLETAT 8 LTSLET T Sbjct: 524 LTSLETNT 531>XP_006721290 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LTSLETAT 8 LTSLET T Sbjct: 524 LTSLETNT 531>XP_005256079 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LTSLETAT 8 LTSLET T Sbjct: 524 LTSLETNT 531>XP_005256078 Length = 774 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LTSLETAT 8 LTSLET T Sbjct: 524 LTSLETNT 531>XP_005263222 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSLETATE 9 +SLETAT+ Sbjct: 191 SSLETATD 198>XP_005263221 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSLETATE 9 +SLETAT+ Sbjct: 191 SSLETATD 198>XP_005263220 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSLETATE 9 +SLETAT+ Sbjct: 191 SSLETATD 198>XP_006714345 Length = 1961 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSLETATE 9 +SLETAT+ Sbjct: 332 SSLETATD 339>XP_005263219 Length = 1996 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TSLETATE 9 +SLETAT+ Sbjct: 367 SSLETATD 374>XP_005246157 Length = 239 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS E ATE Sbjct: 212 LTSSEVATE 220>XP_005246156 Length = 405 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS E ATE Sbjct: 346 LTSSEVATE 354>NP_002408 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTSLETAT 8 +TSLET T Sbjct: 851 MTSLETKT 858>NP_001139438 Length = 2896 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTSLETAT 8 +TSLET T Sbjct: 491 MTSLETKT 498>NP_005364 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TSLETATE 9 T +ETATE Sbjct: 481 TRVETATE 488>NP_056073 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SLETATE 9 SL+TATE Sbjct: 619 SLQTATE 625>XP_006717927 Length = 2406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTSLETAT 8 +TSLET T Sbjct: 1 MTSLETKT 8>XP_006717082 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SLETATE 9 SL+TATE Sbjct: 551 SLQTATE 557>XP_006717081 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SLETATE 9 SL+TATE Sbjct: 619 SLQTATE 625>NP_006531 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSLETAT 8 +TSL+T+T Sbjct: 280 ITSLDTST 287>NP_001274152 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTSLETA 7 LTSLET+ Sbjct: 445 LTSLETS 451>NP_775894 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS+ET E Sbjct: 375 LTSVETTPE 383>NP_001124390 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS+ET E Sbjct: 682 LTSVETTPE 690>NP_054858 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTSLETA 7 LTSLET+ Sbjct: 445 LTSLETS 451>XP_006721892 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS+ET E Sbjct: 634 LTSVETTPE 642>XP_006721891 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS+ET E Sbjct: 682 LTSVETTPE 690>XP_006721890 Length = 891 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTSLETATE 9 LTS+ET E Sbjct: 682 LTSVETTPE 690>XP_005251190 Length = 1395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSLETAT 8 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251188 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSLETAT 8 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251189 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSLETAT 8 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251187 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSLETAT 8 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251186 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSLETAT 8 +TSL+T+T Sbjct: 280 ITSLDTST 287>XP_005251185 Length = 1464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTSLETAT 8 +TSL+T+T Sbjct: 280 ITSLDTST 287>NP_060469 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LETATE 9 LETATE Sbjct: 1026 LETATE 1031Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.288 0.103 0.226 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 276,926 Number of extensions: 365 Number of successful extensions: 59 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |