Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 18 1935 NP_001185763 18 1935 NP_055459 18 1935 NP_001002811 18 1935 NP_001002812 18 1935 XP_006711719 18 1935 XP_006711717 18 1935 XP_006711716 18 1935 XP_006711715 18 1935 XP_006711714 18 1935 XP_006711713 18 1935 XP_006711712 18 1935 XP_006711711 18 1935 XP_006711710 18 1935 XP_006711709 18 1935 XP_005277503 18 1935 XP_005273038 18 1935 XP_006711708 18 1935 XP_005277500 18 1935 XP_006711707 18 1935 XP_005277499 18 1935 XP_006711706 18 1935 XP_006711705 18 1935 NP_851320 16 7355>NP_001185761 Length = 2240 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 896 LTQEVLLLR 904>NP_001185763 Length = 2362 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 830 LTQEVLLLR 838>NP_055459 Length = 2346 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 830 LTQEVLLLR 838>NP_001002811 Length = 1132 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>NP_001002812 Length = 969 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 830 LTQEVLLLR 838>XP_006711719 Length = 2302 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 896 LTQEVLLLR 904>XP_006711717 Length = 2385 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 896 LTQEVLLLR 904>XP_006711716 Length = 2411 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 896 LTQEVLLLR 904>XP_006711715 Length = 2428 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 830 LTQEVLLLR 838>XP_006711714 Length = 2429 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 830 LTQEVLLLR 838>XP_006711713 Length = 2432 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 833 LTQEVLLLR 841>XP_006711712 Length = 2473 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_006711711 Length = 2482 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_006711710 Length = 2494 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 896 LTQEVLLLR 904>XP_006711709 Length = 2495 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 896 LTQEVLLLR 904>XP_005277503 Length = 2498 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_005273038 Length = 2509 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_006711708 Length = 2512 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_005277500 Length = 2525 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_006711707 Length = 2553 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_005277499 Length = 2561 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_006711706 Length = 2591 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>XP_006711705 Length = 2592 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTQAVLLLR 9 LTQ VLLLR Sbjct: 993 LTQEVLLLR 1001>NP_851320 Length = 440 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LTQAVLLL 8 +TQ+VLLL Sbjct: 296 MTQSVLLL 303Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.148 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 283,553 Number of extensions: 274 Number of successful extensions: 24 Number of sequences better than 10000.0: 24 Number of HSP's gapped: 24 Number of HSP's successfully gapped: 24 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |