Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_057502 18 1482 NP_861969 18 1482 NP_000259 18 1482 NP_861968 18 1482 NP_861966 18 1482 NP_861970 18 1482 NP_861546 18 1482 NP_861967 18 1482 NP_001013758 18 1935 NP_981953 18 1935 NP_689844 18 1935 NP_006141 17 3301 XP_005272662 17 3301 XP_005250685 17 3301 XP_005250684 17 3301 XP_005250683 17 3301 XP_005250682 17 3301 NP_057191 17 4312 XP_006714540 17 4312 NP_001120702 16 5631 NP_001120701 16 5631 NP_060370 16 5631 NP_005137 16 5631 NP_055025 16 7355 NP_001003927 16 7355 NP_065811 16 7355 NP_112598 16 7355 XP_006712712 16 7355 XP_006712711 16 7355 XP_006712710 16 7355 XP_006712709 16 7355 NP_068566 15 9605 NP_001258791 15 9605 NP_714913 15 9605 NP_775787 15 9605 NP_056049 15 9605 NP_001091988 15 9605 NP_061182 15 9605 XP_005255279 15 9605 XP_006718479 15 9605 XP_006718474 15 9605 XP_005248952 15 9605 XP_005248951 15 9605 XP_005248950 15 9605 XP_005248949 15 9605 XP_005262943 15 9605 XP_005262942 15 9605 XP_006713468 15 9605 XP_005265616 15 9605 NP_001123509 15 9605 NP_001073886 15 9605>NP_057502 Length = 590 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 250 LTPKISF 256>NP_861969 Length = 507 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 167 LTPKISF 173>NP_000259 Length = 595 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 250 LTPKISF 256>NP_861968 Length = 507 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 167 LTPKISF 173>NP_861966 Length = 548 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 208 LTPKISF 214>NP_861970 Length = 590 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 250 LTPKISF 256>NP_861546 Length = 590 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 250 LTPKISF 256>NP_861967 Length = 549 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 LTPKISF Sbjct: 209 LTPKISF 215>NP_001013758 Length = 1035 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 L PKIS RG Sbjct: 77 LLPKISLRG 85>NP_981953 Length = 791 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 L PKIS RG Sbjct: 77 LLPKISLRG 85>NP_689844 Length = 645 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 L PKIS RG Sbjct: 77 LLPKISLRG 85>NP_006141 Length = 615 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TPKISFR 8 TP++SFR Sbjct: 471 TPRVSFR 477>XP_005272662 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TPKISFR 8 TP++SFR Sbjct: 403 TPRVSFR 409>XP_005250685 Length = 193 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTPKISFRG 9 + P+I+FRG Sbjct: 175 IKPRITFRG 183>XP_005250684 Length = 204 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTPKISFRG 9 + P+I+FRG Sbjct: 186 IKPRITFRG 194>XP_005250683 Length = 204 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTPKISFRG 9 + P+I+FRG Sbjct: 186 IKPRITFRG 194>XP_005250682 Length = 204 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTPKISFRG 9 + P+I+FRG Sbjct: 186 IKPRITFRG 194>NP_057191 Length = 1074 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPKISFRG 9 TPKI+F G Sbjct: 499 TPKINFVG 506>XP_006714540 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TPKISFRG 9 TPKI+F G Sbjct: 455 TPKINFVG 462>NP_001120702 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TPKISFRG 9 TPKI RG Sbjct: 191 TPKIYLRG 198>NP_001120701 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TPKISFRG 9 TPKI RG Sbjct: 191 TPKIYLRG 198>NP_060370 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TPKISFRG 9 TPKI RG Sbjct: 191 TPKIYLRG 198>NP_005137 Length = 800 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTPKISFR 8 LTPK +FR Sbjct: 720 LTPKEAFR 727>NP_055025 Length = 236 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LTPKISFRG 9 +TP++ ++G Sbjct: 64 ITPEVDYKG 72>NP_001003927 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LTPKISFRG 9 +TP++ ++G Sbjct: 87 ITPEVDYKG 95>NP_065811 Length = 1572 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPKISFR 8 TPK SFR Sbjct: 381 TPKHSFR 387>NP_112598 Length = 5088 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KISFRG 9 K+SFRG Sbjct: 2707 KVSFRG 2712Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KISFRG 9 K+SFRG Sbjct: 3238 KVSFRG 3243Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KISFRG 9 K+SFRG Sbjct: 3772 KVSFRG 3777Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KISFRG 9 K+SFRG Sbjct: 4306 KVSFRG 4311Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KISFRG 9 K+SFRG Sbjct: 4839 KVSFRG 4844>XP_006712712 Length = 1414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPKISFR 8 TPK SFR Sbjct: 223 TPKHSFR 229>XP_006712711 Length = 1448 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPKISFR 8 TPK SFR Sbjct: 257 TPKHSFR 263>XP_006712710 Length = 1528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPKISFR 8 TPK SFR Sbjct: 388 TPKHSFR 394>XP_006712709 Length = 1579 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TPKISFR 8 TPK SFR Sbjct: 388 TPKHSFR 394>NP_068566 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KISFRG 9 K+SFRG Sbjct: 48 KLSFRG 53>NP_001258791 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKISFRG 9 PKI+F G Sbjct: 417 PKINFSG 423>NP_714913 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 PKISFRG 9 PK FRG Sbjct: 162 PKTDFRG 168>NP_775787 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKISFRG 9 PKI+F G Sbjct: 406 PKINFSG 412>NP_056049 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 +TP+I F G Sbjct: 278 VTPEIIFEG 286>NP_001091988 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 +TP+I F G Sbjct: 278 VTPEIIFEG 286>NP_061182 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 PKISFRG 9 PK FRG Sbjct: 169 PKTDFRG 175>XP_005255279 Length = 855 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TPKISFRG 9 +P++ FRG Sbjct: 602 SPRLPFRG 609>XP_006718479 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKISFRG 9 PKI+ RG Sbjct: 155 PKITLRG 161>XP_006718474 Length = 897 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 PKISFRG 9 PKI+ RG Sbjct: 155 PKITLRG 161>XP_005248952 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 +TP+I F G Sbjct: 278 VTPEIIFEG 286>XP_005248951 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 +TP+I F G Sbjct: 278 VTPEIIFEG 286>XP_005248950 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 +TP+I F G Sbjct: 278 VTPEIIFEG 286>XP_005248949 Length = 1386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTPKISFRG 9 +TP+I F G Sbjct: 278 VTPEIIFEG 286>XP_005262943 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 PKISFRG 9 PK FRG Sbjct: 162 PKTDFRG 168>XP_005262942 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 PKISFRG 9 PK FRG Sbjct: 174 PKTDFRG 180>XP_006713468 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 +TPKIS+ Sbjct: 1 MTPKISW 7>XP_005265616 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTPKISF 7 +TPKIS+ Sbjct: 56 MTPKISW 62>NP_001123509 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 PKISFRG 9 PK FRG Sbjct: 169 PKTDFRG 175>NP_001073886 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 TPKISFRG 9 +P++ FRG Sbjct: 616 SPRLPFRG 623Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.146 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 744,328 Number of extensions: 1439 Number of successful extensions: 55 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |