Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138874 17 2528 NP_056306 17 4312 NP_116259 17 4312 XP_006715515 17 4312 XP_006715514 17 4312 XP_006715513 17 4312 XP_005266974 17 4312 XP_005266973 17 4312 XP_005266972 17 4312 XP_005266971 17 4312 XP_005266970 17 4312 XP_005266969 17 4312 NP_878252 16 7355 NP_002784 15 9605 NP_001182760 15 9605 NP_004450 15 9605 NP_001001585 15 9605 NP_001001583 15 9605 NP_001001582 15 9605 NP_001001579 15 9605 NP_001001578 15 9605 NP_001001577 15 9605 NP_001001574 15 9605 NP_001001572 15 9605 NP_001001571 15 9605 NP_001001570 15 9605 NP_002597 15 9605 NP_872579 15 9605 XP_005261189 15 9605 XP_005257218 15 9605 XP_005257217 15 9605 XP_005257216 15 9605 XP_005257215 15 9605 XP_005257214 15 9605 XP_005257213 15 9605 XP_005257212 15 9605 XP_006721834 15 9605 XP_005257211 15 9605 XP_005257210 15 9605 XP_005257209 15 9605 XP_005257208 15 9605 XP_006721833 15 9605 XP_005257207 15 9605 XP_006710446 15 9605 XP_006710445 15 9605 XP_005270577 15 9605 NP_001001584 15 9605 NP_001001580 15 9605 NP_001001575 15 9605 NP_001001576 15 9605 NP_001001581 15 9605 NP_001001568 15 9605 NP_001001573 15 9605 NP_001001569 15 9605 NP_001001567 15 9605>NP_001138874 Length = 922 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LTLTKMILT 9 LTLTK+++T Sbjct: 696 LTLTKLMIT 704>NP_056306 Length = 805 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 335 MLLTKMLLT 343>NP_116259 Length = 805 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 335 MLLTKMLLT 343>XP_006715515 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 240 MLLTKMLLT 248>XP_006715514 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 240 MLLTKMLLT 248>XP_006715513 Length = 719 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 240 MLLTKMLLT 248>XP_005266974 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 335 MLLTKMLLT 343>XP_005266973 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 335 MLLTKMLLT 343>XP_005266972 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 335 MLLTKMLLT 343>XP_005266971 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 398 MLLTKMLLT 406>XP_005266970 Length = 868 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 398 MLLTKMLLT 406>XP_005266969 Length = 877 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLTKMILT 9 + LTKM+LT Sbjct: 398 MLLTKMLLT 406>NP_878252 Length = 150 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTLTKMILT 9 LTLT ILT Sbjct: 106 LTLTPSILT 114>NP_002784 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LTLTKMI 7 LTLTK+I Sbjct: 90 LTLTKII 96>NP_001182760 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTKMILT 9 +TKM+LT Sbjct: 641 ITKMLLT 647>NP_004450 Length = 2903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>NP_001001585 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 243 MTLLKMIL 250>NP_001001583 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 424 MTLLKMIL 431>NP_001001582 Length = 552 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 409 MTLLKMIL 416>NP_001001579 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 243 MTLLKMIL 250>NP_001001578 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 348 MTLLKMIL 355>NP_001001577 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 316 MTLLKMIL 323>NP_001001574 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 364 MTLLKMIL 371>NP_001001572 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 243 MTLLKMIL 250>NP_001001571 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 349 MTLLKMIL 356>NP_001001570 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 397 MTLLKMIL 404>NP_002597 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 450 MTLLKMIL 457>NP_872579 Length = 2920 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 1960 TGTKMVLT 1967>XP_005261189 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 450 MTLLKMIL 457>XP_005257218 Length = 2957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257217 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257216 Length = 3015 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257215 Length = 3032 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 1960 TGTKMVLT 1967>XP_005257214 Length = 3094 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2022 TGTKMVLT 2029>XP_005257213 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2023 TGTKMVLT 2030>XP_005257212 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2023 TGTKMVLT 2030>XP_006721834 Length = 3100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257211 Length = 3100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257210 Length = 3104 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257209 Length = 3148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257208 Length = 3157 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2085 TGTKMVLT 2092>XP_006721833 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_005257207 Length = 3158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TLTKMILT 9 T TKM+LT Sbjct: 2086 TGTKMVLT 2093>XP_006710446 Length = 1239 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTKMILT 9 +TKM+LT Sbjct: 630 ITKMLLT 636>XP_006710445 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTKMILT 9 +TKM+LT Sbjct: 641 ITKMLLT 647>XP_005270577 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTKMILT 9 +TKM+LT Sbjct: 641 ITKMLLT 647>NP_001001584 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 243 MTLLKMIL 250>NP_001001580 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 233 MTLLKMIL 240>NP_001001575 Length = 433 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 290 MTLLKMIL 297>NP_001001576 Length = 376 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 233 MTLLKMIL 240>NP_001001581 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 383 MTLLKMIL 390>NP_001001568 Length = 466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 323 MTLLKMIL 330>NP_001001573 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 243 MTLLKMIL 250>NP_001001569 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 322 MTLLKMIL 329>NP_001001567 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTLTKMIL 8 +TL KMIL Sbjct: 390 MTLLKMIL 397Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.138 0.333 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 276,455 Number of extensions: 396 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |