Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 17 2528 NP_671714 17 2528 XP_006715890 17 2528 XP_005250160 17 2528 XP_005250159 17 2528 NP_002729 16 5631 NP_997700 16 5631 NP_055668 16 5631 XP_006721677 16 5631 XP_006721676 16 5631 NP_001091979 16 5631 NP_001170904 16 7355 NP_001265354 16 7355 NP_001170899 16 7355 NP_001170902 16 7355 NP_671737 16 7355 NP_067638 16 7355 NP_055938 16 7355 NP_001979 16 7355 NP_055495 16 7355 NP_443124 16 7355 NP_065987 16 7355 XP_006722261 16 7355 XP_005258130 16 7355 XP_005253976 16 7355 XP_005253975 16 7355 XP_005264780 16 7355 XP_006713127 16 7355 XP_006713126 16 7355 XP_005264779 16 7355 XP_005264778 16 7355 XP_005264777 16 7355 NP_073754 16 7355 NP_208382 16 7355 NP_060626 15 9605 NP_056193 15 9605 NP_998821 15 9605 NP_001092809 15 9605 NP_444269 15 9605 XP_005260357 15 9605 XP_005260356 15 9605>NP_005742 Length = 3907 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTL ISELE Sbjct: 2604 LTLRISELE 2612>NP_671714 Length = 3899 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTL ISELE Sbjct: 2596 LTLRISELE 2604>XP_006715890 Length = 3860 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTL ISELE Sbjct: 2557 LTLRISELE 2565>XP_005250160 Length = 3939 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTL ISELE Sbjct: 2636 LTLRISELE 2644>XP_005250159 Length = 3952 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTL ISELE Sbjct: 2649 LTLRISELE 2657>NP_002729 Length = 673 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 L+ GISEL+ Sbjct: 259 LSFGISELQ 267>NP_997700 Length = 671 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 L+ GISEL+ Sbjct: 259 LSFGISELQ 267>NP_055668 Length = 1051 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLGISELE 9 TLG SELE Sbjct: 302 TLGDSELE 309>XP_006721677 Length = 1028 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLGISELE 9 TLG SELE Sbjct: 302 TLGDSELE 309>XP_006721676 Length = 1073 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLGISELE 9 TLG SELE Sbjct: 302 TLGDSELE 309>NP_001091979 Length = 1006 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TLGISELE 9 TLG SELE Sbjct: 302 TLGDSELE 309>NP_001170904 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+ +LE Sbjct: 569 LTIGMGDLE 577>NP_001265354 Length = 1774 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTLG SE++ Sbjct: 1036 LTLGSSEMK 1044>NP_001170899 Length = 824 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+ +LE Sbjct: 629 LTIGMGDLE 637>NP_001170902 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+ +LE Sbjct: 642 LTIGMGDLE 650>NP_671737 Length = 811 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+ +LE Sbjct: 616 LTIGMGDLE 624>NP_067638 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+ +LE Sbjct: 676 LTIGMGDLE 684>NP_055938 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+S+ E Sbjct: 964 LTIGLSDYE 972>NP_001979 Length = 2033 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTLGISELE 9 LTL I ELE Sbjct: 1442 LTLRIQELE 1450>NP_055495 Length = 2235 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGISELE 9 LGI+ELE Sbjct: 1927 LGIAELE 1933>NP_443124 Length = 2459 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTLG SE++ Sbjct: 1721 LTLGSSEMK 1729>NP_065987 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGISELE 9 LGIS+LE Sbjct: 591 LGISDLE 597>XP_006722261 Length = 2092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGISELE 9 LGI+ELE Sbjct: 1784 LGIAELE 1790>XP_005258130 Length = 2234 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LGISELE 9 LGI+ELE Sbjct: 1926 LGIAELE 1932>XP_005253976 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+ +LE Sbjct: 642 LTIGMGDLE 650>XP_005253975 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+ +LE Sbjct: 676 LTIGMGDLE 684>XP_005264780 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+S+ E Sbjct: 616 LTIGLSDYE 624>XP_006713127 Length = 745 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+S+ E Sbjct: 675 LTIGLSDYE 683>XP_006713126 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+S+ E Sbjct: 910 LTIGLSDYE 918>XP_005264779 Length = 989 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+S+ E Sbjct: 919 LTIGLSDYE 927>XP_005264778 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+S+ E Sbjct: 931 LTIGLSDYE 939>XP_005264777 Length = 1003 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LT+G+S+ E Sbjct: 933 LTIGLSDYE 941>NP_073754 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTLGISEL 8 LT+GIS++ Sbjct: 306 LTIGISDI 313>NP_208382 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 L+LG SEL+ Sbjct: 157 LSLGTSELD 165>NP_060626 Length = 4363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTLGISELE 9 LTL + ELE Sbjct: 1303 LTLSMDELE 1311>NP_056193 Length = 4388 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTLGISELE 9 LTL + ELE Sbjct: 1303 LTLSMDELE 1311>NP_998821 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTLGISELE 9 LTLG ++LE Sbjct: 209 LTLGKADLE 217>NP_001092809 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTLGISE 7 +TLG+SE Sbjct: 96 ITLGLSE 102>NP_444269 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTLGISE 7 +TLG+SE Sbjct: 97 ITLGLSE 103>XP_005260357 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTLGISE 7 +TLG+SE Sbjct: 96 ITLGLSE 102>XP_005260356 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTLGISE 7 +TLG+SE Sbjct: 97 ITLGLSE 103Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.138 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,600 Number of extensions: 843 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |