Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138390 21 175 NP_001138386 21 175 NP_001138387 21 175 NP_000132 21 175 NP_075259 21 175 NP_001138388 21 175 NP_001138391 21 175 NP_001138385 21 175 NP_075418 21 175 XP_006717776 21 175 XP_006717775 21 175 XP_006717774 21 175 XP_006717773 21 175 XP_006717772 21 175 XP_006717771 21 175 NP_945193 17 4312 NP_001019833 16 5631 NP_000961 16 5631 NP_001901 16 5631 NP_683865 16 5631 NP_001268997 16 5631 NP_001268991 16 5631 NP_003577 16 5631 NP_001268992 16 5631 XP_006721162 16 5631 XP_006721161 16 5631 XP_005255692 16 5631 XP_006721160 16 5631 XP_005253977 16 5631 XP_006719612 16 5631 XP_006719611 16 5631 XP_006719610 16 5631 XP_006719609 16 5631 NP_878315 16 7355 NP_699165 16 7355 NP_001185882 16 7355 NP_057204 16 7355 NP_899196 16 7355 NP_722576 16 7355 NP_068593 16 7355 NP_076976 16 7355 XP_005262424 16 7355 XP_006724427 16 7355 XP_005255372 16 7355 XP_005267358 16 7355 XP_006720081 16 7355 XP_006720080 16 7355 NP_001360 15 9605 NP_000050 15 9605 NP_008835 15 9605 NP_001075109 15 9605 NP_001243757 15 9605 NP_001269255 15 9605 NP_001243756 15 9605 NP_060045 15 9605 NP_055642 15 9605 NP_006350 15 9605 NP_001036002 15 9605 XP_005256628 15 9605 XP_006721556 15 9605 XP_005256626 15 9605 XP_005248319 15 9605 XP_005245703 15 9605 XP_006711736 15 9605 XP_005245701 15 9605 XP_005245700 15 9605 NP_001005174 15 9605>NP_001138390 Length = 704 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 303 LTKRIPLRR 311>NP_001138386 Length = 709 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 306 LTKRIPLRR 314>NP_001138387 Length = 707 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 329 LTKRIPLRR 337>NP_000132 Length = 821 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 418 LTKRIPLRR 426>NP_075259 Length = 822 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 419 LTKRIPLRR 427>NP_001138388 Length = 706 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 303 LTKRIPLRR 311>NP_001138391 Length = 680 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 330 LTKRIPLRR 338>NP_001138385 Length = 769 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 419 LTKRIPLRR 427>NP_075418 Length = 732 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 329 LTKRIPLRR 337>XP_006717776 Length = 806 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 437 LTKRIPLRR 445>XP_006717775 Length = 726 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 323 LTKRIPLRR 331>XP_006717774 Length = 752 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 349 LTKRIPLRR 357>XP_006717773 Length = 807 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 438 LTKRIPLRR 446>XP_006717772 Length = 838 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 437 LTKRIPLRR 445>XP_006717771 Length = 839 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRVPLRR 9 LTKR+PLRR Sbjct: 438 LTKRIPLRR 446>NP_945193 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTKRVPLRR 9 LT+ +PLRR Sbjct: 26 LTRLLPLRR 34>NP_001019833 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 183 RVPLRR 188>NP_000961 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 183 RVPLRR 188>NP_001901 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 23 RVPLRR 28>NP_683865 Length = 363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 23 RVPLRR 28>NP_001268997 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 195 RVPLRR 200>NP_001268991 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 195 RVPLRR 200>NP_003577 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 195 RVPLRR 200>NP_001268992 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 195 RVPLRR 200>XP_006721162 Length = 282 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 77 RVPLRR 82>XP_006721161 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 195 RVPLRR 200>XP_005255692 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 195 RVPLRR 200>XP_006721160 Length = 400 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 195 RVPLRR 200>XP_005253977 Length = 177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 72 RVPLRR 77>XP_006719612 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 183 RVPLRR 188>XP_006719611 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 183 RVPLRR 188>XP_006719610 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 183 RVPLRR 188>XP_006719609 Length = 288 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 RVPLRR Sbjct: 183 RVPLRR 188>NP_878315 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 R+PLRR Sbjct: 501 RIPLRR 506>NP_699165 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 R+PLRR Sbjct: 506 RIPLRR 511>NP_001185882 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRVPLRR 9 +++VPLRR Sbjct: 79 SQKVPLRR 86>NP_057204 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKRVPLRR 9 T R+P+RR Sbjct: 381 TIRIPIRR 388>NP_899196 Length = 624 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKRVPLRR 9 T R+P+RR Sbjct: 381 TIRIPIRR 388>NP_722576 Length = 3080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTKRVPL 7 LT+R+PL Sbjct: 2613 LTERIPL 2619>NP_068593 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TKRVPLRR 9 T R PLRR Sbjct: 209 TDRCPLRR 216>NP_076976 Length = 234 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRVPLRR 9 +++VPLRR Sbjct: 79 SQKVPLRR 86>XP_005262424 Length = 2875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTKRVPL 7 LT+R+PL Sbjct: 2408 LTERIPL 2414>XP_006724427 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVPLRR 9 R+PLRR Sbjct: 501 RIPLRR 506>XP_005255372 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTKRVPLRR 9 L + VPLRR Sbjct: 24 LLEEVPLRR 32>XP_005267358 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRVPLRR 9 ++R+PLRR Sbjct: 549 SERLPLRR 556>XP_006720081 Length = 795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRVPLRR 9 ++R+PLRR Sbjct: 549 SERLPLRR 556>XP_006720080 Length = 806 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRVPLRR 9 ++R+PLRR Sbjct: 549 SERLPLRR 556>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTKRVPLRR 9 +TK VPL R Sbjct: 2763 VTKLVPLTR 2771>NP_000050 Length = 3418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LTKRVPLRR 9 LTK +P+ + Sbjct: 809 LTKNIPMEK 817>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTKRVPLRR 9 L+ +VPL+R Sbjct: 3151 LSSQVPLKR 3159>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTKRVPLRR 9 L+ +VPL+R Sbjct: 3151 LSSQVPLKR 3159>NP_001243757 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LT+ VP+R Sbjct: 492 LTRNVPVR 499>NP_001269255 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LT+ VP+R Sbjct: 311 LTRNVPVR 318>NP_001243756 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LT+ VP+R Sbjct: 492 LTRNVPVR 499>NP_060045 Length = 1419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LT+ VP+R Sbjct: 1400 LTRNVPVR 1407>NP_055642 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>NP_006350 Length = 669 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KRVPLRR 9 +R PLRR Sbjct: 7 RRAPLRR 13>NP_001036002 Length = 701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KRVPLRR 9 +R PLRR Sbjct: 7 RRAPLRR 13>XP_005256628 Length = 511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LT+ VP+R Sbjct: 492 LTRNVPVR 499>XP_006721556 Length = 1357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LT+ VP+R Sbjct: 1338 LTRNVPVR 1345>XP_005256626 Length = 1388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LT+ VP+R Sbjct: 1369 LTRNVPVR 1376>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTKRVPLRR 9 +TK VPL R Sbjct: 2748 VTKLVPLTR 2756>XP_005245703 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LTKR+P + Sbjct: 272 LTKRLPTK 279>XP_006711736 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>XP_005245701 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>XP_005245700 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRVPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>NP_001005174 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTKRVPLRR 9 LTKR+P R Sbjct: 164 LTKRLPYCR 172Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.147 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 580,941 Number of extensions: 789 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |