Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138390 20 299 NP_001138386 20 299 NP_001138387 20 299 NP_000132 20 299 NP_075259 20 299 NP_001138388 20 299 NP_001138391 20 299 NP_001138385 20 299 NP_075418 20 299 XP_006717776 20 299 XP_006717775 20 299 XP_006717774 20 299 XP_006717773 20 299 XP_006717772 20 299 XP_006717771 20 299 NP_945193 17 3301 NP_031384 16 5631 NP_001012418 16 5631 NP_071919 16 5631 NP_001243479 16 5631 NP_001157864 16 5631 XP_005268060 16 5631 XP_005267358 16 5631 XP_006720081 16 5631 XP_006720080 16 5631 XP_005249137 16 5631 XP_006715145 16 5631 XP_006715144 16 5631 XP_005249136 16 5631 XP_005249134 16 5631 XP_005249135 16 5631 NP_055642 16 7355 NP_068593 16 7355 XP_005245703 16 7355 XP_006711736 16 7355 XP_005245701 16 7355 XP_005245700 16 7355 NP_001005174 16 7355 NP_001189489 15 9605 NP_694540 15 9605 NP_996744 15 9605 NP_008928 15 9605 NP_542780 15 9605 NP_996742 15 9605 NP_001265552 15 9605 NP_001265553 15 9605 XP_006722986 15 9605 XP_005268911 15 9605 XP_006717618 15 9605 XP_005269456 15 9605 XP_006717617 15 9605 XP_006717616 15 9605 XP_006717615 15 9605 XP_005269454 15 9605 XP_005269453 15 9605 XP_006717614 15 9605 XP_006717613 15 9605 XP_006717612 15 9605 XP_005269452 15 9605 XP_005269451 15 9605 XP_006717611 15 9605 XP_005269450 15 9605 XP_005269449 15 9605 XP_005269448 15 9605 XP_005269447 15 9605 XP_005269446 15 9605 XP_005269445 15 9605 XP_006715409 15 9605 NP_996743 15 9605 NP_001001913 15 9605 NP_940942 15 9605>NP_001138390 Length = 704 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 303 LTKRIPLRR 311>NP_001138386 Length = 709 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 306 LTKRIPLRR 314>NP_001138387 Length = 707 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 329 LTKRIPLRR 337>NP_000132 Length = 821 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 418 LTKRIPLRR 426>NP_075259 Length = 822 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 419 LTKRIPLRR 427>NP_001138388 Length = 706 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 303 LTKRIPLRR 311>NP_001138391 Length = 680 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 330 LTKRIPLRR 338>NP_001138385 Length = 769 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 419 LTKRIPLRR 427>NP_075418 Length = 732 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 329 LTKRIPLRR 337>XP_006717776 Length = 806 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 437 LTKRIPLRR 445>XP_006717775 Length = 726 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 323 LTKRIPLRR 331>XP_006717774 Length = 752 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 349 LTKRIPLRR 357>XP_006717773 Length = 807 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 438 LTKRIPLRR 446>XP_006717772 Length = 838 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 437 LTKRIPLRR 445>XP_006717771 Length = 839 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LTKRMPLRR 9 LTKR+PLRR Sbjct: 438 LTKRIPLRR 446>NP_945193 Length = 801 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTKRMPLRR 9 LT+ +PLRR Sbjct: 26 LTRLLPLRR 34>NP_031384 Length = 593 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KRMPLRR 9 KR PLRR Sbjct: 14 KRSPLRR 20>NP_001012418 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTKRMPLR 8 LT+RMP++ Sbjct: 63 LTERMPVK 70>NP_071919 Length = 675 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKRMPLRR 9 T+ MP+RR Sbjct: 45 TRMMPIRR 52>NP_001243479 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKRMPLRR 9 T+ MP+RR Sbjct: 11 TRMMPIRR 18>NP_001157864 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 KRMPLRR 9 KR PLRR Sbjct: 14 KRSPLRR 20>XP_005268060 Length = 641 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKRMPLRR 9 T+ MP+RR Sbjct: 11 TRMMPIRR 18>XP_005267358 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRMPLRR 9 ++R+PLRR Sbjct: 549 SERLPLRR 556>XP_006720081 Length = 795 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRMPLRR 9 ++R+PLRR Sbjct: 549 SERLPLRR 556>XP_006720080 Length = 806 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TKRMPLRR 9 ++R+PLRR Sbjct: 549 SERLPLRR 556>XP_005249137 Length = 232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTKRMPLR 8 LT+RMP++ Sbjct: 63 LTERMPVK 70>XP_006715145 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTKRMPLR 8 LT+RMP++ Sbjct: 57 LTERMPVK 64>XP_006715144 Length = 387 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTKRMPLR 8 LT+RMP++ Sbjct: 63 LTERMPVK 70>XP_005249136 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTKRMPLR 8 LT+RMP++ Sbjct: 63 LTERMPVK 70>XP_005249134 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTKRMPLR 8 LT+RMP++ Sbjct: 63 LTERMPVK 70>XP_005249135 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTKRMPLR 8 LT+RMP++ Sbjct: 63 LTERMPVK 70>NP_055642 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRMPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>NP_068593 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TKRMPLRR 9 T R PLRR Sbjct: 209 TDRCPLRR 216>XP_005245703 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRMPLR 8 LTKR+P + Sbjct: 272 LTKRLPTK 279>XP_006711736 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRMPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>XP_005245701 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRMPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>XP_005245700 Length = 810 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTKRMPLR 8 LTKR+P + Sbjct: 608 LTKRLPTK 615>NP_001005174 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LTKRMPLRR 9 LTKR+P R Sbjct: 164 LTKRLPYCR 172>NP_001189489 Length = 298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 TKRMPLR 8 T+R PLR Sbjct: 249 TRRFPLR 255>NP_694540 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TKRMPLRR 9 TKRMP + Sbjct: 455 TKRMPCHK 462>NP_996744 Length = 2948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2296 KMPLRR 2301>NP_008928 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 374 KMPLRR 379>NP_542780 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 R+PLRR Sbjct: 51 RLPLRR 56>NP_996742 Length = 996 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 374 KMPLRR 379>NP_001265552 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TKRMPLRR 9 TKRMP + Sbjct: 455 TKRMPCHK 462>NP_001265553 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TKRMPLRR 9 TKRMP + Sbjct: 455 TKRMPCHK 462>XP_006722986 Length = 1519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 KRMPLRR 9 +R PLRR Sbjct: 14 RRFPLRR 20>XP_005268911 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 TKRMPLRR 9 ++R+P+RR Sbjct: 538 SERLPIRR 545>XP_006717618 Length = 2826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2251 KMPLRR 2256>XP_005269456 Length = 2846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2271 KMPLRR 2276>XP_006717617 Length = 2887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_006717616 Length = 2891 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_006717615 Length = 2903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_005269454 Length = 2912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2229 KMPLRR 2234>XP_005269453 Length = 2922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_006717614 Length = 2938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_006717613 Length = 2948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2296 KMPLRR 2301>XP_006717612 Length = 2950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_005269452 Length = 2954 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2271 KMPLRR 2276>XP_005269451 Length = 2957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2274 KMPLRR 2279>XP_006717611 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_005269450 Length = 2968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_005269449 Length = 2969 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_005269448 Length = 2979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2296 KMPLRR 2301>XP_005269447 Length = 2980 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_005269446 Length = 2999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_005269445 Length = 2999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 2316 KMPLRR 2321>XP_006715409 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 R+PLRR Sbjct: 51 RLPLRR 56>NP_996743 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RMPLRR 9 +MPLRR Sbjct: 442 KMPLRR 447>NP_001001913 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTKRMP 6 LTKR+P Sbjct: 164 LTKRLP 169>NP_940942 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TKRMPLRR 9 T+ MPLR+ Sbjct: 278 TQAMPLRK 285Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.338 0.145 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 583,758 Number of extensions: 871 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |