Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_055643                                                              18    1482
NP_001267474                                                           18    1935
NP_060732                                                              18    1935
NP_443715                                                              18    1935
NP_443716                                                              18    1935
NP_001267470                                                           18    1935
NP_443711                                                              18    1935
NP_001267475                                                           18    1935
NP_001157745                                                           18    1935
NP_001074010                                                           18    1935
XP_005254310                                                           18    1935
XP_005254309                                                           18    1935
XP_005254306                                                           18    1935
XP_005254305                                                           18    1935
XP_005254304                                                           18    1935
XP_005254303                                                           18    1935
XP_006720506                                                           18    1935
XP_005254302                                                           18    1935
XP_005254301                                                           18    1935
XP_006720505                                                           18    1935
XP_005254300                                                           18    1935
XP_006713758                                                           18    1935
XP_006713757                                                           18    1935
XP_006713756                                                           18    1935
XP_005247668                                                           18    1935
XP_006713755                                                           18    1935
XP_005247667                                                           18    1935
XP_005247666                                                           18    1935
XP_005247665                                                           18    1935
XP_005247664                                                           18    1935
XP_006713754                                                           18    1935
XP_006713753                                                           18    1935
XP_005247661                                                           18    1935
XP_006713752                                                           18    1935
XP_005247660                                                           18    1935
NP_005433                                                              17    3301
NP_037483                                                              17    3301
NP_001265111                                                           17    3301
NP_006584                                                              17    3301
XP_005265567                                                           17    3301
NP_056306                                                              17    4312
NP_116259                                                              17    4312
XP_006715515                                                           17    4312
XP_006715514                                                           17    4312
XP_006715513                                                           17    4312
XP_005266974                                                           17    4312
XP_005266973                                                           17    4312
XP_005266972                                                           17    4312
XP_005266971                                                           17    4312
XP_005266970                                                           17    4312
XP_005266969                                                           17    4312
NP_001018098                                                           16    7355
NP_060154                                                              16    7355
NP_060550                                                              16    7355
NP_065872                                                              16    7355
NP_001007189                                                           15    9605
NP_001229825                                                           15    9605
NP_001229826                                                           15    9605
NP_055477                                                              15    9605
NP_001129501                                                           15    9605
NP_112203                                                              15    9605
NP_001138396                                                           15    9605
NP_001185982                                                           15    9605
NP_001182760                                                           15    9605
XP_005261924                                                           15    9605
XP_006724450                                                           15    9605
XP_006724449                                                           15    9605
XP_005261923                                                           15    9605
XP_006724448                                                           15    9605
XP_006724447                                                           15    9605
XP_005261922                                                           15    9605
XP_005261921                                                           15    9605
XP_005261920                                                           15    9605
XP_005261919                                                           15    9605
XP_005255663                                                           15    9605
XP_005255661                                                           15    9605
XP_006719746                                                           15    9605
XP_005253685                                                           15    9605
XP_005253684                                                           15    9605
XP_006710446                                                           15    9605
XP_006710445                                                           15    9605
XP_005270577                                                           15    9605
NP_003950                                                              15    9605
>NP_055643
          Length = 621

 Score = 18.1 bits (35), Expect =  1482
 Identities = 6/9 (66%), Positives = 9/9 (100%)

Query: 1   LTKMILTKQ 9
           +TK+I+TKQ
Sbjct: 365 ITKLIITKQ 373
>NP_001267474
          Length = 1091

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 597 TKMLITKQ 604
>NP_060732
          Length = 1182

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 688 TKMLITKQ 695
>NP_443715
          Length = 1241

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 747 TKMLITKQ 754
>NP_443716
          Length = 1131

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 636 TKMLITKQ 643
>NP_001267470
          Length = 1234

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 739 TKMLITKQ 746
>NP_443711
          Length = 1292

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 798 TKMLITKQ 805
>NP_001267475
          Length = 1032

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 538 TKMLITKQ 545
>NP_001157745
          Length = 3065

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>NP_001074010
          Length = 2856

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254310
          Length = 2906

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254309
          Length = 2956

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254306
          Length = 3066

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254305
          Length = 3114

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254304
          Length = 3115

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254303
          Length = 3115

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_006720506
          Length = 3115

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254302
          Length = 3115

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254301
          Length = 3115

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_006720505
          Length = 3115

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_005254300
          Length = 3115

 Score = 17.7 bits (34), Expect =  1935
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MILTKQ
Sbjct: 93  TEMILTKQ 100
>XP_006713758
          Length = 877

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 747 TKMLITKQ 754
>XP_006713757
          Length = 1034

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 538 TKMLITKQ 545
>XP_006713756
          Length = 1093

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 597 TKMLITKQ 604
>XP_005247668
          Length = 1132

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 636 TKMLITKQ 643
>XP_006713755
          Length = 1165

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 670 TKMLITKQ 677
>XP_005247667
          Length = 1183

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 688 TKMLITKQ 695
>XP_005247666
          Length = 1183

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 688 TKMLITKQ 695
>XP_005247665
          Length = 1184

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 688 TKMLITKQ 695
>XP_005247664
          Length = 1191

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 695 TKMLITKQ 702
>XP_006713754
          Length = 1224

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 729 TKMLITKQ 736
>XP_006713753
          Length = 1225

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 729 TKMLITKQ 736
>XP_005247661
          Length = 1242

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 747 TKMLITKQ 754
>XP_006713752
          Length = 1242

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 747 TKMLITKQ 754
>XP_005247660
          Length = 1243

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           TKM++TKQ
Sbjct: 747 TKMLITKQ 754
>NP_005433
          Length = 686

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MI+TKQ
Sbjct: 285 TEMIITKQ 292
>NP_037483
          Length = 535

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MI+TKQ
Sbjct: 155 TEMIITKQ 162
>NP_001265111
          Length = 705

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MI+TKQ
Sbjct: 285 TEMIITKQ 292
>NP_006584
          Length = 682

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MI+TKQ
Sbjct: 222 TEMIITKQ 229
>XP_005265567
          Length = 515

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 2   TKMILTKQ 9
           T+MI+TKQ
Sbjct: 285 TEMIITKQ 292
>NP_056306
          Length = 805

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>NP_116259
          Length = 805

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_006715515
          Length = 719

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 242 LTKMLLTE 249
>XP_006715514
          Length = 719

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 242 LTKMLLTE 249
>XP_006715513
          Length = 719

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 242 LTKMLLTE 249
>XP_005266974
          Length = 814

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_005266973
          Length = 814

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_005266972
          Length = 814

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 337 LTKMLLTE 344
>XP_005266971
          Length = 859

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 400 LTKMLLTE 407
>XP_005266970
          Length = 868

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 400 LTKMLLTE 407
>XP_005266969
          Length = 877

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   LTKMILTK 8
           LTKM+LT+
Sbjct: 400 LTKMLLTE 407
>NP_001018098
          Length = 3628

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LTKMILTK 8
            L KM+LTK
Sbjct: 1505 LLKMLLTK 1512
>NP_060154
          Length = 3710

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LTKMILTK 8
            L KM+LTK
Sbjct: 1462 LLKMLLTK 1469
>NP_060550
          Length = 3585

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LTKMILTK 8
            L KM+LTK
Sbjct: 1462 LLKMLLTK 1469
>NP_065872
          Length = 3753

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    LTKMILTK 8
            L KM+LTK
Sbjct: 1505 LLKMLLTK 1512
>NP_001007189
          Length = 559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>NP_001229825
          Length = 1603

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>NP_001229826
          Length = 1503

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>NP_055477
          Length = 1572

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>NP_001129501
          Length = 1594

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>NP_112203
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LTKMILTKQ 9
           LT+ +LTK+
Sbjct: 187 LTRCLLTKE 195
>NP_001138396
          Length = 743

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LTKMILTKQ 9
           LT+ +LTK+
Sbjct: 187 LTRCLLTKE 195
>NP_001185982
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LTKMILTKQ 9
           LT+ +LTK+
Sbjct: 187 LTRCLLTKE 195
>NP_001182760
          Length = 1283

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LTKMILT 7
           +TKM+LT
Sbjct: 641 ITKMLLT 647
>XP_005261924
          Length = 1176

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_006724450
          Length = 1187

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_006724449
          Length = 1198

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_005261923
          Length = 1307

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_006724448
          Length = 1490

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 237 MILTKQ 242
>XP_006724447
          Length = 1516

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_005261922
          Length = 1525

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_005261921
          Length = 1581

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_005261920
          Length = 1594

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_005261919
          Length = 1603

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   MILTKQ 9
           MILTKQ
Sbjct: 350 MILTKQ 355
>XP_005255663
          Length = 743

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LTKMILTKQ 9
           LT+ +LTK+
Sbjct: 187 LTRCLLTKE 195
>XP_005255661
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LTKMILTKQ 9
           LT+ +LTK+
Sbjct: 187 LTRCLLTKE 195
>XP_006719746
          Length = 603

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TKMILTK 8
           TK++LTK
Sbjct: 122 TKLLLTK 128
>XP_005253685
          Length = 1061

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TKMILTK 8
           TK++LTK
Sbjct: 122 TKLLLTK 128
>XP_005253684
          Length = 1073

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TKMILTK 8
           TK++LTK
Sbjct: 134 TKLLLTK 140
>XP_006710446
          Length = 1239

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LTKMILT 7
           +TKM+LT
Sbjct: 630 ITKMLLT 636
>XP_006710445
          Length = 1250

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LTKMILT 7
           +TKM+LT
Sbjct: 641 ITKMLLT 647
>XP_005270577
          Length = 1250

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LTKMILT 7
           +TKM+LT
Sbjct: 641 ITKMLLT 647
>NP_003950
          Length = 1068

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TKMILTK 8
           TK++LTK
Sbjct: 134 TKLLLTK 140
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.324    0.130    0.310 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 287,128
Number of extensions: 327
Number of successful extensions: 83
Number of sequences better than 10000.0: 83
Number of HSP's gapped: 83
Number of HSP's successfully gapped: 83
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package