Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 19 869 NP_060785 19 869 NP_361014 19 869 NP_001080 18 1935 NP_001269645 17 4312 NP_036579 17 4312 NP_001269646 17 4312 NP_001269647 17 4312 NP_001361 17 4312 XP_005250173 17 4312 XP_006712019 17 4312 NP_848599 16 5631 NP_001157164 16 5631 NP_001004341 16 5631 XP_005254427 16 5631 XP_006713081 16 5631 NP_001271427 16 7355 NP_689559 16 7355 NP_001269462 16 7355 NP_001271428 16 7355 NP_001185739 16 7355 NP_085116 16 7355 NP_003618 16 7355 NP_000005 16 7355 NP_055199 16 7355 XP_005260950 16 7355 XP_005260949 16 7355 XP_005260948 16 7355 XP_005260947 16 7355 XP_006721509 16 7355 XP_006721508 16 7355 XP_006721507 16 7355 XP_006720053 16 7355 XP_005272473 16 7355 XP_006720052 16 7355 XP_006720051 16 7355 XP_006720050 16 7355 XP_006720048 16 7355 XP_005272471 16 7355 XP_006720047 16 7355 XP_006720045 16 7355 XP_006719119 16 7355 XP_005271562 16 7355 XP_005271558 16 7355 XP_005274415 16 7355 XP_005274414 16 7355 NP_001108451 15 9605 NP_001108454 15 9605 NP_003713 15 9605 NP_001108450 15 9605 NP_001108452 15 9605 NP_001108453 15 9605 NP_071750 15 9605 XP_005256148 15 9605 XP_006721307 15 9605 XP_005256144 15 9605 XP_005256143 15 9605 XP_005256142 15 9605 XP_005247903 15 9605 XP_005247901 15 9605 XP_005247900 15 9605 XP_005273100 15 9605 XP_006711797 15 9605 XP_005273098 15 9605 NP_444280 15 9605>NP_001013433 Length = 589 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 LTG QSLTS Sbjct: 459 LTGHQSLTS 467>NP_060785 Length = 627 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 LTG QSLTS Sbjct: 497 LTGHQSLTS 505>NP_361014 Length = 707 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 LTG QSLTS Sbjct: 577 LTGHQSLTS 585>NP_001080 Length = 1704 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 LTG +SLTS Sbjct: 1429 LTGEESLTS 1437>NP_001269645 Length = 1225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TGR+ LTS Sbjct: 555 VTGRKGLTS 563>NP_036579 Length = 1225 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TGR+ LTS Sbjct: 555 VTGRKGLTS 563>NP_001269646 Length = 1226 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TGR+ LTS Sbjct: 555 VTGRKGLTS 563>NP_001269647 Length = 1167 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TGR+ LTS Sbjct: 497 VTGRKGLTS 505>NP_001361 Length = 4158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGRQSLT 8 TG+QSLT Sbjct: 2451 TGKQSLT 2457>XP_005250173 Length = 1222 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TGR+ LTS Sbjct: 555 VTGRKGLTS 563>XP_006712019 Length = 4158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGRQSLT 8 TG+QSLT Sbjct: 2451 TGKQSLT 2457>NP_848599 Length = 3092 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGRQSLT 8 +GRQSLT Sbjct: 2261 SGRQSLT 2267>NP_001157164 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGRQSLT 8 TGRQSL+ Sbjct: 296 TGRQSLS 302>NP_001004341 Length = 361 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 TG +SLTS Sbjct: 339 TGEESLTS 346>XP_005254427 Length = 381 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGRQSLT 8 TGRQSL+ Sbjct: 296 TGRQSLS 302>XP_006713081 Length = 3964 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TGRQSLT 8 +GRQSLT Sbjct: 2284 SGRQSLT 2290>NP_001271427 Length = 573 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 488 LTGLQSLIS 496>NP_689559 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 484 LTGLQSLIS 492>NP_001269462 Length = 627 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 +GR SLTS Sbjct: 219 SGRNSLTS 226>NP_001271428 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 347 LTGLQSLIS 355>NP_001185739 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 479 LTGLQSLIS 487>NP_085116 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TGRQSLT 8 TGR SLT Sbjct: 364 TGRSSLT 370>NP_003618 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 479 LTGLQSLIS 487>NP_000005 Length = 1474 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTGRQS 6 LTGRQS Sbjct: 335 LTGRQS 340>NP_055199 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 TG +SLTS Sbjct: 26 TGHRSLTS 33>XP_005260950 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 +GR SLTS Sbjct: 219 SGRNSLTS 226>XP_005260949 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 +GR SLTS Sbjct: 219 SGRNSLTS 226>XP_005260948 Length = 682 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 +GR SLTS Sbjct: 249 SGRNSLTS 256>XP_005260947 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 +GR SLTS Sbjct: 249 SGRNSLTS 256>XP_006721509 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 451 LTGLQSLIS 459>XP_006721508 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 484 LTGLQSLIS 492>XP_006721507 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 484 LTGLQSLIS 492>XP_006720053 Length = 164 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_005272473 Length = 186 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_006720052 Length = 188 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_006720051 Length = 188 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_006720050 Length = 195 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_006720048 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_005272471 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_006720047 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_006720045 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 L GR++LTS Sbjct: 3 LRGRKNLTS 11>XP_006719119 Length = 1512 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LTGRQS 6 LTGRQS Sbjct: 335 LTGRQS 340>XP_005271562 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 TG +SLTS Sbjct: 26 TGHRSLTS 33>XP_005271558 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGRQSLTS 9 TG +SLTS Sbjct: 26 TGHRSLTS 33>XP_005274415 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 495 LTGLQSLIS 503>XP_005274414 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 LTG QSL S Sbjct: 505 LTGLQSLIS 513>NP_001108451 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 280 ITGRQSV 286>NP_001108454 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 186 ITGRQSV 192>NP_003713 Length = 680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 280 ITGRQSV 286>NP_001108450 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 280 ITGRQSV 286>NP_001108452 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 186 ITGRQSV 192>NP_001108453 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 186 ITGRQSV 192>NP_071750 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 L RQSLTS Sbjct: 433 LRQRQSLTS 441>XP_005256148 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 L RQSLTS Sbjct: 225 LRQRQSLTS 233>XP_006721307 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 L RQSLTS Sbjct: 317 LRQRQSLTS 325>XP_005256144 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 L RQSLTS Sbjct: 433 LRQRQSLTS 441>XP_005256143 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 L RQSLTS Sbjct: 433 LRQRQSLTS 441>XP_005256142 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LTGRQSLTS 9 L RQSLTS Sbjct: 433 LRQRQSLTS 441>XP_005247903 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 280 ITGRQSV 286>XP_005247901 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 263 ITGRQSV 269>XP_005247900 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTGRQSL 7 +TGRQS+ Sbjct: 280 ITGRQSV 286>XP_005273100 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TG+ SLTS Sbjct: 23 VTGQLSLTS 31>XP_006711797 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TG+ SLTS Sbjct: 39 VTGQLSLTS 47>XP_005273098 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TG+ SLTS Sbjct: 68 VTGQLSLTS 76>NP_444280 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTGRQSLTS 9 +TG+ SLTS Sbjct: 68 VTGQLSLTS 76Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.117 0.287 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 404,834 Number of extensions: 431 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |