Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 20 390 NP_001035957 20 390 XP_006721990 20 390 XP_006721989 20 390 XP_005258041 20 390 XP_006721988 20 390 XP_006721987 20 390 XP_006721986 20 390 XP_005258040 20 390 XP_006721985 20 390 NP_001186918 18 1935 NP_005981 17 2528 NP_000145 17 3301 NP_001129575 17 4312 NP_597705 17 4312 NP_002847 16 5631 NP_001035700 16 5631 NP_078856 16 5631 NP_001182180 16 7355 NP_778239 16 7355 NP_001182181 16 7355 NP_008825 16 7355 NP_001153699 16 7355 NP_001002294 16 7355 NP_079413 16 7355 NP_001182183 16 7355 NP_001182178 16 7355 NP_001193499 16 7355 NP_001013049 16 7355 NP_778243 16 7355 NP_001182179 16 7355 NP_001193501 16 7355 NP_443150 16 7355 NP_001182177 16 7355 NP_001193500 16 7355 NP_001193498 16 7355 NP_055952 16 7355 NP_001005519 16 7355 NP_001027450 16 7355 NP_005124 16 7355 NP_009114 16 7355 XP_006720764 16 7355 XP_005254752 16 7355 XP_006720763 16 7355 XP_006720762 16 7355 XP_005254751 16 7355 XP_005252817 16 7355 XP_005269532 16 7355 XP_006716855 16 7355 XP_006716854 16 7355 XP_005250906 16 7355 XP_005245101 16 7355 NP_036257 15 9605 NP_005520 15 9605 NP_002644 15 9605 NP_001123553 15 9605 NP_065772 15 9605 NP_002653 15 9605 NP_942147 15 9605 NP_060692 15 9605 XP_006724837 15 9605 XP_005259228 15 9605 XP_005259227 15 9605 XP_005259226 15 9605 XP_005254198 15 9605 XP_005253072 15 9605 XP_005247591 15 9605 XP_005247590 15 9605 XP_006710661 15 9605 XP_005245920 15 9605 XP_006710660 15 9605 XP_006710659 15 9605 XP_006710658 15 9605 XP_006710657 15 9605>NP_000258 Length = 2818 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2589 LTDPKIQAL 2597>NP_001035957 Length = 2839 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2610 LTDPKIQAL 2618>XP_006721990 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2620 LTDPKIQAL 2628>XP_006721989 Length = 2823 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2620 LTDPKIQAL 2628>XP_005258041 Length = 2836 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2589 LTDPKIQAL 2597>XP_006721988 Length = 2846 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2599 LTDPKIQAL 2607>XP_006721987 Length = 2849 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2620 LTDPKIQAL 2628>XP_006721986 Length = 2854 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2607 LTDPKIQAL 2615>XP_005258040 Length = 2857 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2610 LTDPKIQAL 2618>XP_006721985 Length = 2867 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDPKIQ L Sbjct: 2620 LTDPKIQAL 2628>NP_001186918 Length = 122 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 LTDP+ QVL Sbjct: 94 LTDPRHQVL 102>NP_005981 Length = 968 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LTDPKIQVL 9 LT+P+IQV+ Sbjct: 129 LTEPQIQVV 137>NP_000145 Length = 392 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 L+DPK+ VL Sbjct: 213 LSDPKLAVL 221>NP_001129575 Length = 1108 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 L+ PK+QVL Sbjct: 142 LSRPKVQVL 150>NP_597705 Length = 1099 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTDPKIQVL 9 L+ PK+QVL Sbjct: 140 LSRPKVQVL 148>NP_002847 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 DPKIQVL 9 DPK QVL Sbjct: 409 DPKAQVL 415>NP_001035700 Length = 1069 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 TDPKIQV 8 +DPK+Q+ Sbjct: 284 SDPKVQI 290>NP_078856 Length = 1120 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 TDPKIQV 8 +DPK+Q+ Sbjct: 335 SDPKVQI 341>NP_001182180 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 175 MQDPKMQV 182>NP_778239 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 189 MQDPKMQV 196>NP_001182181 Length = 284 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 117 MQDPKMQV 124>NP_008825 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 452 LTDPKL 457>NP_001153699 Length = 2330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 1047 LTDPKL 1052>NP_001002294 Length = 532 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 452 LTDPKL 457>NP_079413 Length = 2443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 1047 LTDPKL 1052>NP_001182183 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 121 MQDPKMQV 128>NP_001182178 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 175 MQDPKMQV 182>NP_001193499 Length = 1130 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 246 LTDPEIE 252>NP_001013049 Length = 1198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 246 LTDPEIE 252>NP_778243 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 175 MQDPKMQV 182>NP_001182179 Length = 302 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 135 MQDPKMQV 142>NP_001193501 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 246 LTDPEIE 252>NP_443150 Length = 1168 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 246 LTDPEIE 252>NP_001182177 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 189 MQDPKMQV 196>NP_001193500 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 246 LTDPEIE 252>NP_001193498 Length = 1179 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 246 LTDPEIE 252>NP_055952 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DPKIQVL 9 +PK+QVL Sbjct: 112 EPKLQVL 118>NP_001005519 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DPKIQVL 9 DP++QVL Sbjct: 18 DPQLQVL 24>NP_001027450 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 198 LTDPKL 203>NP_005124 Length = 329 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 302 LTDPKL 307>NP_009114 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDPKIQVL 9 +DP +QVL Sbjct: 331 SDPNLQVL 338>XP_006720764 Length = 1584 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_005254752 Length = 2357 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 961 LTDPKL 966>XP_006720763 Length = 2395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_006720762 Length = 2397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_005254751 Length = 2407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 1047 LTDPKL 1052>XP_005252817 Length = 812 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDPKIQVL 9 +DP +QVL Sbjct: 346 SDPNLQVL 353>XP_005269532 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 246 LTDPEIE 252>XP_006716855 Length = 254 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 87 MQDPKMQV 94>XP_006716854 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 + DPK+QV Sbjct: 175 MQDPKMQV 182>XP_005250906 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DPKIQVL 9 +PK+QVL Sbjct: 76 EPKLQVL 82>XP_005245101 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 LTDPKI 6 LTDPK+ Sbjct: 389 LTDPKL 394>NP_036257 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDPKIQVL 9 TDP +QV+ Sbjct: 317 TDPVLQVV 324>NP_005520 Length = 4391 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 L+DP +Q+ Sbjct: 1430 LSDPDVQI 1437>NP_002644 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LTDPKIQV 8 LT+P+++V Sbjct: 128 LTEPRVRV 135>NP_001123553 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TDPKIQ 7 +DPKIQ Sbjct: 47 SDPKIQ 52>NP_065772 Length = 1709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 1026 LTDPQIR 1032>NP_002653 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TDPKIQ 7 +DPKIQ Sbjct: 47 SDPKIQ 52>NP_942147 Length = 640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DPKIQVL 9 DPK+Q L Sbjct: 261 DPKVQEL 267>NP_060692 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDPKIQVL 9 +DPK+Q L Sbjct: 130 SDPKLQEL 137>XP_006724837 Length = 1533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTDPKIQ 7 LTDP+I+ Sbjct: 850 LTDPQIR 856>XP_005259228 Length = 538 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DPKIQVL 9 DPK+Q L Sbjct: 261 DPKVQEL 267>XP_005259227 Length = 601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DPKIQVL 9 DPK+Q L Sbjct: 261 DPKVQEL 267>XP_005259226 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 DPKIQVL 9 DPK+Q L Sbjct: 261 DPKVQEL 267>XP_005254198 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDPKIQVL 9 TDP +QV+ Sbjct: 317 TDPVLQVV 324>XP_005253072 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDPKIQVL 9 +DPK+Q L Sbjct: 46 SDPKLQEL 53>XP_005247591 Length = 1036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TDPKIQ 7 +DPKIQ Sbjct: 47 SDPKIQ 52>XP_005247590 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TDPKIQ 7 +DPKIQ Sbjct: 47 SDPKIQ 52>XP_006710661 Length = 4057 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 L+DP +Q+ Sbjct: 1613 LSDPDVQI 1620>XP_005245920 Length = 4392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 L+DP +Q+ Sbjct: 1431 LSDPDVQI 1438>XP_006710660 Length = 4397 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 L+DP +Q+ Sbjct: 1430 LSDPDVQI 1437>XP_006710659 Length = 4556 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 L+DP +Q+ Sbjct: 1589 LSDPDVQI 1596>XP_006710658 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 L+DP +Q+ Sbjct: 1596 LSDPDVQI 1603>XP_006710657 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 LTDPKIQV 8 L+DP +Q+ Sbjct: 1612 LSDPDVQI 1619Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.143 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 741,106 Number of extensions: 1054 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |