Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 20 390 NP_060890 18 1935 XP_006710817 18 1935 XP_005271062 18 1935 XP_005271061 18 1935 XP_006710816 18 1935 NP_001269723 17 3301 NP_055705 17 3301 NP_001269722 17 3301 NP_001035924 17 3301 NP_878913 17 3301 XP_006713549 17 3301 NP_542781 16 5631 NP_005617 16 7355 NP_008855 16 7355 NP_001071634 16 7355 NP_003760 16 7355 XP_006722075 16 7355 XP_005266998 16 7355 NP_064592 15 9605 NP_001010895 15 9605 NP_055880 15 9605 NP_000437 15 9605 NP_001121361 15 9605 NP_057714 15 9605 NP_001121362 15 9605 NP_997196 15 9605 NP_660153 15 9605 NP_001273148 15 9605 NP_848018 15 9605 NP_443139 15 9605 XP_006721755 15 9605 XP_005254494 15 9605 XP_005254493 15 9605 XP_006720627 15 9605 XP_006719284 15 9605 XP_006719283 15 9605 XP_006719282 15 9605 XP_005271520 15 9605 XP_005271519 15 9605 XP_005271518 15 9605 XP_006717674 15 9605 XP_006717673 15 9605 XP_006717672 15 9605 XP_005269546 15 9605 XP_005269545 15 9605 XP_006717671 15 9605 XP_006717670 15 9605 XP_006717669 15 9605 XP_006717668 15 9605 XP_006717667 15 9605 NP_777568 15 9605>NP_004110 Length = 993 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LTDAEEAMY 9 L DAEEAMY Sbjct: 947 LADAEEAMY 955>NP_060890 Length = 547 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LTDAEEAMY 9 L++AEEA+Y Sbjct: 258 LSEAEEALY 266>XP_006710817 Length = 315 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LTDAEEAMY 9 L++AEEA+Y Sbjct: 26 LSEAEEALY 34>XP_005271062 Length = 316 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LTDAEEAMY 9 L++AEEA+Y Sbjct: 27 LSEAEEALY 35>XP_005271061 Length = 320 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LTDAEEAMY 9 L++AEEA+Y Sbjct: 258 LSEAEEALY 266>XP_006710816 Length = 476 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LTDAEEAMY 9 L++AEEA+Y Sbjct: 187 LSEAEEALY 195>NP_001269723 Length = 895 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TDAEEAMY 9 TD EE MY Sbjct: 311 TDVEEKMY 318>NP_055705 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TDAEEAMY 9 TD EE MY Sbjct: 311 TDVEEKMY 318>NP_001269722 Length = 711 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TDAEEAMY 9 TD EE MY Sbjct: 127 TDVEEKMY 134>NP_001035924 Length = 1133 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TDAEEAMY 9 TD EE MY Sbjct: 551 TDVEEKMY 558>NP_878913 Length = 1135 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TDAEEAMY 9 TD EE MY Sbjct: 551 TDVEEKMY 558>XP_006713549 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TDAEEAMY 9 TD EE MY Sbjct: 311 TDVEEKMY 318>NP_542781 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DAEEAMY 9 DAE+A+Y Sbjct: 63 DAEDALY 69>NP_005617 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTDAEEAMY 9 L DA++A+Y Sbjct: 45 LRDADDAVY 53>NP_008855 Length = 248 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DAEEAMY 9 DAE+A+Y Sbjct: 66 DAEDAVY 72>NP_001071634 Length = 201 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DAEEAMY 9 DAE+A+Y Sbjct: 66 DAEDAVY 72>NP_003760 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DAEEAMY 9 DAE+A+Y Sbjct: 64 DAEDAIY 70>XP_006722075 Length = 196 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 DAEEAMY 9 DAE+A+Y Sbjct: 66 DAEDAVY 72>XP_005266998 Length = 762 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 TDAEEA 7 TDAEEA Sbjct: 610 TDAEEA 615>NP_064592 Length = 1561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTDAEEAMY 9 LTD ++A+Y Sbjct: 403 LTDFQKAVY 411>NP_001010895 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LTDAEEAMY 9 LTD ++A+Y Sbjct: 403 LTDFQKAVY 411>NP_055880 Length = 1989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD + A Y Sbjct: 853 LTDTQNAQY 861>NP_000437 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TDAEEAMY 9 TD + AMY Sbjct: 121 TDEDNAMY 128>NP_001121361 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDAEEAMY 9 T+A+E MY Sbjct: 232 TEAKEEMY 239>NP_057714 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDAEEAMY 9 T+A+E MY Sbjct: 232 TEAKEEMY 239>NP_001121362 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDAEEAMY 9 T+A+E MY Sbjct: 205 TEAKEEMY 212>NP_997196 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD E MY Sbjct: 794 LTDLEIGMY 802>NP_660153 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 1049 LTEAEDAL 1056>NP_001273148 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD E MY Sbjct: 406 LTDLEIGMY 414>NP_848018 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTDAEEAMY 9 +TD E+A Y Sbjct: 447 MTDGEDADY 455>NP_443139 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD E MY Sbjct: 894 LTDLEIGMY 902>XP_006721755 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD E MY Sbjct: 788 LTDLEIGMY 796>XP_005254494 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDAEEAMY 9 T+A+E MY Sbjct: 232 TEAKEEMY 239>XP_005254493 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDAEEAMY 9 T+A+E MY Sbjct: 232 TEAKEEMY 239>XP_006720627 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TDAEEAMY 9 T+A+E MY Sbjct: 232 TEAKEEMY 239>XP_006719284 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD E MY Sbjct: 492 LTDLEIGMY 500>XP_006719283 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD E MY Sbjct: 784 LTDLEIGMY 792>XP_006719282 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD E MY Sbjct: 784 LTDLEIGMY 792>XP_005271520 Length = 1801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD + A Y Sbjct: 665 LTDTQNAQY 673>XP_005271519 Length = 1833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD + A Y Sbjct: 697 LTDTQNAQY 705>XP_005271518 Length = 1982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LTDAEEAMY 9 LTD + A Y Sbjct: 846 LTDTQNAQY 854>XP_006717674 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 857 LTEAEDAL 864>XP_006717673 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 857 LTEAEDAL 864>XP_006717672 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 857 LTEAEDAL 864>XP_005269546 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 857 LTEAEDAL 864>XP_005269545 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 979 LTEAEDAL 986>XP_006717671 Length = 1091 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 1019 LTEAEDAL 1026>XP_006717670 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 1048 LTEAEDAL 1055>XP_006717669 Length = 1120 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 1048 LTEAEDAL 1055>XP_006717668 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 1049 LTEAEDAL 1056>XP_006717667 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LTDAEEAM 8 LT+AE+A+ Sbjct: 1049 LTEAEDAL 1056>NP_777568 Length = 306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTDAEEAMY 9 +TD E+A Y Sbjct: 271 MTDGEDADY 279Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.119 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 516,090 Number of extensions: 921 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |