Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138389 20 390 NP_001138390 20 390 NP_001138386 20 390 NP_001138387 20 390 NP_000132 20 390 NP_075259 20 390 NP_001138388 20 390 NP_001138391 20 390 NP_001138385 20 390 NP_075418 20 390 XP_006717776 20 390 XP_006717775 20 390 XP_006717774 20 390 XP_006717773 20 390 XP_006717772 20 390 XP_006717771 20 390 NP_001245348 16 5631 NP_065980 16 5631 NP_071365 16 5631 NP_065961 16 5631 NP_001158137 16 5631 XP_005260285 16 5631 XP_006723916 16 5631 XP_006720282 16 5631 XP_006720281 16 5631 XP_006720280 16 5631 XP_006720279 16 5631 XP_005267972 16 5631 XP_005267971 16 5631 XP_006720278 16 5631 XP_005267970 16 5631 XP_006716134 16 5631 NP_065766 16 5631 NP_002572 16 7355 XP_006717192 16 7355 NP_000930 15 9605 NP_001030333 15 9605 NP_001068567 15 9605 NP_003717 15 9605 NP_001193947 15 9605 NP_599031 15 9605 NP_008863 15 9605 NP_001193946 15 9605 NP_599032 15 9605 NP_057594 15 9605 XP_006724370 15 9605 XP_006724369 15 9605 XP_006724368 15 9605 XP_006724367 15 9605 XP_006724366 15 9605 XP_006724365 15 9605 XP_006724364 15 9605 XP_006724363 15 9605 XP_006724362 15 9605 XP_006724361 15 9605 XP_005257812 15 9605>NP_001138389 Length = 705 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 338 TADTPMLA 345>NP_001138390 Length = 704 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 337 TADTPMLA 344>NP_001138386 Length = 709 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 342 TADTPMLA 349>NP_001138387 Length = 707 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 365 TADTPMLA 372>NP_000132 Length = 821 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 454 TADTPMLA 461>NP_075259 Length = 822 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 455 TADTPMLA 462>NP_001138388 Length = 706 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 339 TADTPMLA 346>NP_001138391 Length = 680 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 366 TADTPMLA 373>NP_001138385 Length = 769 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 455 TADTPMLA 462>NP_075418 Length = 732 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 365 TADTPMLA 372>XP_006717776 Length = 806 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 473 TADTPMLA 480>XP_006717775 Length = 726 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 359 TADTPMLA 366>XP_006717774 Length = 752 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 385 TADTPMLA 392>XP_006717773 Length = 807 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 474 TADTPMLA 481>XP_006717772 Length = 838 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 471 TADTPMLA 478>XP_006717771 Length = 839 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 TADTPMLA 9 TADTPMLA Sbjct: 472 TADTPMLA 479>NP_001245348 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTADTPM 7 +T DTPM Sbjct: 575 ITGDTPM 581>NP_065980 Length = 640 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LTADTPM 7 +T DTPM Sbjct: 575 ITGDTPM 581>NP_071365 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTADTPMLA 9 +TA TP+LA Sbjct: 103 ITAVTPLLA 111>NP_065961 Length = 1934 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TADTPMLA 9 T DTP LA Sbjct: 932 TVDTPTLA 939>NP_001158137 Length = 1950 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TADTPMLA 9 T DTP LA Sbjct: 932 TVDTPTLA 939>XP_005260285 Length = 430 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTADTPMLA 9 +TA TP+LA Sbjct: 97 ITAVTPLLA 105>XP_006723916 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LTADTPMLA 9 +TA TP+LA Sbjct: 123 ITAVTPLLA 131>XP_006720282 Length = 891 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 179 LTADSPSL 186>XP_006720281 Length = 937 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 225 LTADSPSL 232>XP_006720280 Length = 945 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 233 LTADSPSL 240>XP_006720279 Length = 1191 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 479 LTADSPSL 486>XP_005267972 Length = 1325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 665 LTADSPSL 672>XP_005267971 Length = 1344 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 665 LTADSPSL 672>XP_006720278 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 665 LTADSPSL 672>XP_005267970 Length = 1377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 665 LTADSPSL 672>XP_006716134 Length = 1847 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 TADTPMLA 9 T DTP LA Sbjct: 829 TVDTPTLA 836>NP_065766 Length = 1364 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LTADTPML 8 LTAD+P L Sbjct: 652 LTADSPSL 659>NP_002572 Length = 1627 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TADTPM 7 TADTP+ Sbjct: 872 TADTPL 877>XP_006717192 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 TADTPM 7 TADTP+ Sbjct: 174 TADTPL 179>NP_000930 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTADTPM 7 L+A+TPM Sbjct: 54 LSAETPM 60>NP_001030333 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LTADTPM 7 L+A+TPM Sbjct: 54 LSAETPM 60>NP_001068567 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTADTPMLA 9 LT+D P L+ Sbjct: 80 LTSDAPFLS 88>NP_003717 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTADTPMLA 9 LT+D P L+ Sbjct: 80 LTSDAPFLS 88>NP_001193947 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 394 TSDSPMAA 401>NP_599031 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>NP_008863 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>NP_001193946 Length = 1002 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 392 TSDSPMAA 399>NP_599032 Length = 940 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>NP_057594 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T +TPM+A Sbjct: 304 TENTPMIA 311>XP_006724370 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_006724369 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 62 TSDSPMAA 69>XP_006724368 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_006724367 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_006724366 Length = 857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_006724365 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 250 TSDSPMAA 257>XP_006724364 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_006724363 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_006724362 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_006724361 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TADTPMLA 9 T+D+PM A Sbjct: 338 TSDSPMAA 345>XP_005257812 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LTADTPMLA 9 LT+D P L+ Sbjct: 80 LTSDAPFLS 88Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.125 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 636,432 Number of extensions: 619 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |