Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 869 NP_001075109 19 869 NP_002449 17 2528 NP_116753 16 5631 NP_116754 16 5631 NP_001265548 16 5631 NP_001004754 16 5631 NP_116755 16 5631 NP_116749 16 5631 NP_001161834 16 5631 NP_001161832 16 5631 NP_116750 16 5631 NP_001161833 16 5631 NP_116751 16 5631 NP_001161835 16 5631 NP_055337 16 5631 NP_001243415 16 7355 NP_001243417 16 7355 NP_004478 16 7355 NP_001243416 16 7355 NP_443161 16 7355 NP_001008781 16 7355 XP_006718827 16 7355 XP_006713654 16 7355 XP_006713653 16 7355 XP_005247430 16 7355 XP_005247429 16 7355 XP_006713652 16 7355 XP_006713651 16 7355 XP_006713650 16 7355 XP_005247428 16 7355 XP_006710380 16 7355 XP_005245788 16 7355 XP_006710379 16 7355 XP_006710378 16 7355 NP_006653 15 9605 NP_001005518 15 9605 NP_055109 15 9605 NP_079029 15 9605 NP_085046 15 9605 NP_001001851 15 9605 NP_001005288 15 9605 NP_001001922 15 9605 XP_006712824 15 9605 NP_036510 15 9605 NP_001001913 15 9605 NP_001005237 15 9605 NP_001005195 15 9605>NP_008835 Length = 4128 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SYELILQS 9 SYELILQS Sbjct: 650 SYELILQS 657>NP_001075109 Length = 4097 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SYELILQS 9 SYELILQS Sbjct: 650 SYELILQS 657>NP_002449 Length = 5762 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SYELILQ 8 SYELILQ Sbjct: 961 SYELILQ 967>NP_116753 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 702 SYELVLPS 709>NP_116754 Length = 1048 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 713 SYELVLPS 720>NP_001265548 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 702 SYELVLPS 709>NP_001004754 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LSYELILQS 9 LSY LIL+S Sbjct: 216 LSYVLILRS 224>NP_116755 Length = 1340 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 713 SYELVLPS 720>NP_116749 Length = 1025 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_001161834 Length = 1310 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_001161832 Length = 1339 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_116750 Length = 1347 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_001161833 Length = 1065 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_116751 Length = 1337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_001161835 Length = 1329 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_055337 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SYELILQS 9 SYEL+L S Sbjct: 681 SYELVLPS 688>NP_001243415 Length = 3269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1620 YEILLQS 1626>NP_001243417 Length = 3184 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1540 YEILLQS 1546>NP_004478 Length = 3259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1615 YEILLQS 1621>NP_001243416 Length = 3225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1581 YEILLQS 1587>NP_443161 Length = 1412 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LSYELILQS 9 L+YEL++++ Sbjct: 89 LTYELVIEN 97>NP_001008781 Length = 4557 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SYELILQS 9 SY+LI+Q+ Sbjct: 1736 SYQLIIQA 1743>XP_006718827 Length = 3479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SYELILQS 9 SY+LI+Q+ Sbjct: 626 SYQLIIQA 633>XP_006713654 Length = 3189 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1540 YEILLQS 1546>XP_006713653 Length = 3223 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1579 YEILLQS 1585>XP_005247430 Length = 3228 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1579 YEILLQS 1585>XP_005247429 Length = 3230 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1581 YEILLQS 1587>XP_006713652 Length = 3263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1614 YEILLQS 1620>XP_006713651 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1615 YEILLQS 1621>XP_006713650 Length = 3264 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1620 YEILLQS 1626>XP_005247428 Length = 3269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 YELILQS 9 YE++LQS Sbjct: 1620 YEILLQS 1626>XP_006710380 Length = 1398 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LSYELILQS 9 L+YEL++++ Sbjct: 89 LTYELVIEN 97>XP_005245788 Length = 1434 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LSYELILQS 9 L+YEL++++ Sbjct: 89 LTYELVIEN 97>XP_006710379 Length = 1452 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LSYELILQS 9 L+YEL++++ Sbjct: 89 LTYELVIEN 97>XP_006710378 Length = 1478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 LSYELILQS 9 L+YEL++++ Sbjct: 89 LTYELVIEN 97>NP_006653 Length = 3230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SYELILQ 8 SY+L+LQ Sbjct: 724 SYKLVLQ 730>NP_001005518 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSYELILQS 9 LSY LIL++ Sbjct: 214 LSYTLILKT 222>NP_055109 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSYELILQS 9 LS+E +LQ+ Sbjct: 14 LSHEFVLQN 22>NP_079029 Length = 1316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSYELILQ 8 L Y++ILQ Sbjct: 330 LGYQMILQ 337>NP_085046 Length = 942 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSYELILQ 8 LSYE +LQ Sbjct: 157 LSYEELLQ 164>NP_001001851 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSYELILQ 8 LSYE +LQ Sbjct: 157 LSYEELLQ 164>NP_001005288 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSYELILQS 9 LSY LIL++ Sbjct: 218 LSYALILRA 226>NP_001001922 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSYELILQS 9 LSY LIL++ Sbjct: 225 LSYTLILKA 233>XP_006712824 Length = 1056 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSYELILQ 8 L Y++ILQ Sbjct: 330 LGYQMILQ 337>NP_036510 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSYELILQS 9 +SY LIL S Sbjct: 216 ISYALILSS 224>NP_001001913 Length = 320 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSYELILQS 9 +SY +ILQ+ Sbjct: 218 ISYTMILQA 226>NP_001005237 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSYELILQS 9 LSY LIL++ Sbjct: 218 LSYALILRT 226>NP_001005195 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSYELILQS 9 +SY LIL S Sbjct: 215 ISYALILSS 223Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.136 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 499,701 Number of extensions: 799 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |