Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000224 18 1482 NP_000360 18 1482 XP_005268094 18 1482 XP_005264366 18 1482 XP_006712078 18 1482 NP_002021 17 3301 NP_001013375 17 3301 NP_001005204 17 3301 NP_001013374 17 3301 NP_001182657 17 4312 NP_004162 17 4312 NP_001239581 17 4312 XP_005253124 17 4312 XP_006718340 17 4312 XP_005253123 17 4312 NP_002539 17 4312 NP_001035545 17 4312 NP_036509 17 4312 NP_001004743 17 4312 NP_787079 16 5631 NP_001005191 16 5631 NP_001005236 16 5631 NP_055381 16 5631 NP_001004459 16 5631 NP_039229 16 5631 XP_006722785 16 5631 NP_001004713 16 5631 NP_001073404 16 5631 NP_059976 16 5631 NP_001005190 16 5631 NP_001005282 16 5631 NP_112163 16 5631 NP_001005213 16 5631 NP_001013376 16 5631 NP_001004462 16 7355 NP_065110 16 7355 NP_006059 16 7355 NP_001135817 16 7355 NP_001135815 16 7355 NP_001135816 16 7355 NP_068593 16 7355 XP_005262694 16 7355 XP_005262693 16 7355 NP_004063 16 7355 NP_003691 16 7355 NP_001005203 16 7355 NP_001004684 16 7355 NP_001001953 16 7355 NP_001004463 16 7355 NP_001004464 16 7355 NP_001278367 15 9605 NP_001007250 15 9605 NP_001040 15 9605 NP_001248383 15 9605 NP_001248381 15 9605 NP_001248384 15 9605 NP_001248382 15 9605 NP_005270 15 9605 NP_001091669 15 9605 NP_001002905 15 9605 XP_005246528 15 9605 XP_006712500 15 9605 XP_006710297 15 9605 NP_001004058 15 9605 NP_001002917 15 9605 NP_001002907 15 9605 NP_036492 15 9605 NP_001002918 15 9605 NP_001005194 15 9605>NP_000224 Length = 699 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LSVY LTVI Sbjct: 452 LSVYTLTVI 460>NP_000360 Length = 764 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LSVY LTVI Sbjct: 507 LSVYTLTVI 515>XP_005268094 Length = 764 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LSVY LTVI Sbjct: 507 LSVYTLTVI 515>XP_005264366 Length = 380 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LSVY LTVI Sbjct: 133 LSVYTLTVI 141>XP_006712078 Length = 389 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LSVY LTVI Sbjct: 142 LSVYTLTVI 150>NP_002021 Length = 353 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 +SVY++T+I Sbjct: 111 VSVYLITII 119>NP_001013375 Length = 309 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LS+Y+ TV+ Sbjct: 32 LSIYLFTVV 40>NP_001005204 Length = 309 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LS+Y+ TV+ Sbjct: 32 LSIYLFTVV 40>NP_001013374 Length = 319 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LS+Y+ TV+ Sbjct: 32 LSIYLFTVV 40>NP_001182657 Length = 565 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +YM+TVI Sbjct: 304 LGMYMVTVI 312>NP_004162 Length = 574 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +YM+TVI Sbjct: 313 LGMYMVTVI 321>NP_001239581 Length = 565 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +YM+TVI Sbjct: 304 LGMYMVTVI 312>XP_005253124 Length = 571 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +YM+TVI Sbjct: 310 LGMYMVTVI 318>XP_006718340 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +YM+TVI Sbjct: 318 LGMYMVTVI 326>XP_005253123 Length = 590 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +YM+TVI Sbjct: 329 LGMYMVTVI 337>NP_002539 Length = 312 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 32 LSMYLVTVV 40>NP_001035545 Length = 832 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LS Y+LTV+ Sbjct: 305 LSFYLLTVL 313>NP_036509 Length = 319 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++T+I Sbjct: 32 LSMYLVTII 40>NP_001004743 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 L+VYM+T++ Sbjct: 30 LAVYMITLL 38>NP_787079 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 32 LSMYLVTVL 40>NP_001005191 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 32 LSMYLVTVL 40>NP_001005236 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TVI Sbjct: 32 LPIYLITVI 40>NP_055381 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 32 LSMYLVTVL 40>NP_001004459 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 45 LSMYVVTVV 53>NP_039229 Length = 312 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSVYMLTV 8 L++Y+LTV Sbjct: 31 LTIYLLTV 38>XP_006722785 Length = 363 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 76 LSMYLVTVL 84>NP_001004713 Length = 355 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LS Y++T+I Sbjct: 32 LSTYLVTII 40>NP_001073404 Length = 339 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 50 LSMYLVTVL 58>NP_059976 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 32 LSMYLVTVL 40>NP_001005190 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 32 LSMYLVTVL 40>NP_001005282 Length = 311 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSVYMLTV 8 L++YM+TV Sbjct: 31 LAIYMVTV 38>NP_112163 Length = 309 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSVYMLTVI 9 LS+Y++TV+ Sbjct: 32 LSMYLVTVL 40>NP_001005213 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSVYMLTVI 9 L VY LTV+ Sbjct: 31 LGVYSLTVV 39>NP_001013376 Length = 305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSVYMLTVI 9 L VY LTV+ Sbjct: 31 LGVYSLTVV 39>NP_001004462 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L VY+LTV+ Sbjct: 30 LVVYVLTVL 38>NP_065110 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 S+Y LTV+ Sbjct: 125 SIYFLTVL 132>NP_006059 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L++Y LT+I Sbjct: 281 LNIYNLTII 289>NP_001135817 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYMLTVI 9 SV++LT+I Sbjct: 126 SVFLLTII 133>NP_001135815 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYMLTVI 9 SV++LT+I Sbjct: 126 SVFLLTII 133>NP_001135816 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYMLTVI 9 SV++LT+I Sbjct: 126 SVFLLTII 133>NP_068593 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYMLTVI 9 +VY+LTV+ Sbjct: 222 AVYLLTVL 229>XP_005262694 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L++Y LT+I Sbjct: 281 LNIYNLTII 289>XP_005262693 Length = 796 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L++Y LT+I Sbjct: 281 LNIYNLTII 289>NP_004063 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVYMLTVI 9 SV++LT+I Sbjct: 124 SVFLLTII 131>NP_003691 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L VY++TV+ Sbjct: 32 LGVYLVTVL 40>NP_001005203 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y+LT++ Sbjct: 32 LGIYLLTIM 40>NP_001004684 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y+LTV+ Sbjct: 48 LIIYLLTVL 56>NP_001001953 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L VY+LTV+ Sbjct: 30 LVVYVLTVL 38>NP_001004463 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L VY+LTV+ Sbjct: 30 LVVYVLTVL 38>NP_001004464 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L VY+LTV+ Sbjct: 30 LVVYVLTVL 38>NP_001278367 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TV+ Sbjct: 45 LGIYVVTVV 53>NP_001007250 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TV+ Sbjct: 45 LGIYVVTVV 53>NP_001040 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 S+Y LTV+ Sbjct: 144 SIYCLTVL 151>NP_001248383 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>NP_001248381 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>NP_001248384 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>NP_001248382 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>NP_005270 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>NP_001091669 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>NP_001002905 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TV+ Sbjct: 32 LGIYVVTVV 40>XP_005246528 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>XP_006712500 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SVYMLTVI 9 SV+ LTVI Sbjct: 124 SVFFLTVI 131>XP_006710297 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 VYMLTVI 9 +YMLT++ Sbjct: 334 IYMLTIM 340>NP_001004058 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TV+ Sbjct: 32 LVIYLITVV 40>NP_001002917 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TV+ Sbjct: 32 LGIYVVTVV 40>NP_001002907 Length = 319 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TVI Sbjct: 38 LIIYLVTVI 46>NP_036492 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 LS+Y+ TV+ Sbjct: 32 LSMYLATVL 40>NP_001002918 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++TV+ Sbjct: 32 LGIYVVTVV 40>NP_001005194 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 LSVYMLTVI 9 L +Y++T++ Sbjct: 49 LGIYLVTIV 57Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.147 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 333,381 Number of extensions: 531 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |