Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_722576                                                              20     299
XP_005262424                                                           20     299
NP_001640                                                              18    1482
XP_005274557                                                           18    1482
NP_055641                                                              17    4312
NP_003598                                                              17    4312
XP_005273381                                                           17    4312
XP_005273380                                                           17    4312
XP_005273379                                                           17    4312
XP_006711899                                                           17    4312
XP_005273378                                                           17    4312
XP_005273377                                                           17    4312
XP_006711898                                                           17    4312
XP_006711897                                                           17    4312
XP_005273375                                                           17    4312
XP_005273374                                                           17    4312
NP_001172048                                                           16    5631
NP_001172047                                                           16    5631
NP_061127                                                              16    5631
XP_005255038                                                           16    5631
XP_005255037                                                           16    5631
XP_006716738                                                           16    5631
XP_006716737                                                           16    5631
XP_005272407                                                           16    5631
XP_005247681                                                           16    5631
XP_005247679                                                           16    5631
XP_005247678                                                           16    5631
NP_116291                                                              16    5631
NP_663623                                                              16    7355
NP_065769                                                              16    7355
NP_055917                                                              16    7355
NP_056076                                                              16    7355
NP_079079                                                              16    7355
NP_001165335                                                           16    7355
XP_006721134                                                           16    7355
XP_005255507                                                           16    7355
XP_006716177                                                           16    7355
XP_006710633                                                           16    7355
XP_006710632                                                           16    7355
XP_006710631                                                           16    7355
XP_006710630                                                           16    7355
XP_006710629                                                           16    7355
XP_006710628                                                           16    7355
XP_006710627                                                           16    7355
XP_006710626                                                           16    7355
NP_073585                                                              15    9605
NP_003310                                                              15    9605
NP_000183                                                              15    9605
NP_001136233                                                           15    9605
NP_852259                                                              15    9605
NP_597676                                                              15    9605
NP_542448                                                              15    9605
NP_001243779                                                           15    9605
NP_596869                                                              15    9605
NP_002402                                                              15    9605
NP_002967                                                              15    9605
NP_150628                                                              15    9605
NP_075563                                                              15    9605
NP_073587                                                              15    9605
NP_001157934                                                           15    9605
NP_001229833                                                           15    9605
XP_006722410                                                           15    9605
XP_006722409                                                           15    9605
XP_006722408                                                           15    9605
XP_006722407                                                           15    9605
XP_006722406                                                           15    9605
XP_006722405                                                           15    9605
XP_006722404                                                           15    9605
XP_006722403                                                           15    9605
XP_005254813                                                           15    9605
XP_005274062                                                           15    9605
XP_005250097                                                           15    9605
XP_005250096                                                           15    9605
XP_005250095                                                           15    9605
XP_005246888                                                           15    9605
XP_006712788                                                           15    9605
XP_006712787                                                           15    9605
XP_006712786                                                           15    9605
XP_006712745                                                           15    9605
XP_006712744                                                           15    9605
XP_006712743                                                           15    9605
NP_543146                                                              15    9605
NP_001005187                                                           15    9605
NP_001254479                                                           15    9605
NP_597681                                                              15    9605
>NP_722576
          Length = 3080

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2    STTDHTLS 9
            STTDHTLS
Sbjct: 2134 STTDHTLS 2141
>XP_005262424
          Length = 2875

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2    STTDHTLS 9
            STTDHTLS
Sbjct: 1929 STTDHTLS 1936
>NP_001640
          Length = 1616

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   STTDHTLS 9
           ST DHTLS
Sbjct: 218 STPDHTLS 225
>XP_005274557
          Length = 1615

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   STTDHTLS 9
           ST DHTLS
Sbjct: 218 STPDHTLS 225
>NP_055641
          Length = 1638

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1301 LHSNDHTLS 1309
>NP_003598
          Length = 1719

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1382 LHSNDHTLS 1390
>XP_005273381
          Length = 1732

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1395 LHSNDHTLS 1403
>XP_005273380
          Length = 1751

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1352 LHSNDHTLS 1360
>XP_005273379
          Length = 1754

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1417 LHSNDHTLS 1425
>XP_006711899
          Length = 1770

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1433 LHSNDHTLS 1441
>XP_005273378
          Length = 1781

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1382 LHSNDHTLS 1390
>XP_005273377
          Length = 1794

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1395 LHSNDHTLS 1403
>XP_006711898
          Length = 1797

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1398 LHSNDHTLS 1406
>XP_006711897
          Length = 1816

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1417 LHSNDHTLS 1425
>XP_005273375
          Length = 1829

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1430 LHSNDHTLS 1438
>XP_005273374
          Length = 1832

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    LSTTDHTLS 9
            L + DHTLS
Sbjct: 1433 LHSNDHTLS 1441
>NP_001172048
          Length = 581

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   STTDHTLS 9
           S  DHTLS
Sbjct: 503 SAEDHTLS 510
>NP_001172047
          Length = 610

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   STTDHTLS 9
           S  DHTLS
Sbjct: 532 SAEDHTLS 539
>NP_061127
          Length = 610

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   STTDHTLS 9
           S  DHTLS
Sbjct: 532 SAEDHTLS 539
>XP_005255038
          Length = 321

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  STTDHTL 8
          +T+DHTL
Sbjct: 18 TTSDHTL 24
>XP_005255037
          Length = 347

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2  STTDHTL 8
          +T+DHTL
Sbjct: 18 TTSDHTL 24
>XP_006716738
          Length = 528

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   STTDHTL 8
           STT HTL
Sbjct: 441 STTPHTL 447
>XP_006716737
          Length = 528

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   STTDHTL 8
           STT HTL
Sbjct: 441 STTPHTL 447
>XP_005272407
          Length = 528

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   STTDHTL 8
           STT HTL
Sbjct: 441 STTPHTL 447
>XP_005247681
          Length = 496

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   STTDHTLS 9
           S  DHTLS
Sbjct: 418 SAEDHTLS 425
>XP_005247679
          Length = 528

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   STTDHTLS 9
           S  DHTLS
Sbjct: 450 SAEDHTLS 457
>XP_005247678
          Length = 582

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   STTDHTLS 9
           S  DHTLS
Sbjct: 504 SAEDHTLS 511
>NP_116291
          Length = 528

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 2   STTDHTL 8
           STT HTL
Sbjct: 441 STTPHTL 447
>NP_663623
          Length = 577

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LSTTDHTL 8
           ++TT HTL
Sbjct: 357 ITTTPHTL 364
>NP_065769
          Length = 1352

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3    TTDHTLS 9
            T+DH+LS
Sbjct: 1149 TSDHSLS 1155
>NP_055917
          Length = 1426

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 976 TTEHTL 981
>NP_056076
          Length = 1498

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   LSTTDHTLS 9
           LST +H LS
Sbjct: 828 LSTCEHRLS 836
>NP_079079
          Length = 446

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   STTDHT 7
           STT+HT
Sbjct: 200 STTEHT 205
>NP_001165335
          Length = 406

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   STTDHT 7
           STT+HT
Sbjct: 160 STTEHT 165
>XP_006721134
          Length = 1089

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TTDHTLS 9
           T+DH+LS
Sbjct: 886 TSDHSLS 892
>XP_005255507
          Length = 1089

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TTDHTLS 9
           T+DH+LS
Sbjct: 886 TSDHSLS 892
>XP_006716177
          Length = 386

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   STTDHT 7
           STT+HT
Sbjct: 224 STTEHT 229
>XP_006710633
          Length = 1250

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 800 TTEHTL 805
>XP_006710632
          Length = 1389

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 939 TTEHTL 944
>XP_006710631
          Length = 1412

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 962 TTEHTL 967
>XP_006710630
          Length = 1424

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 974 TTEHTL 979
>XP_006710629
          Length = 1425

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 975 TTEHTL 980
>XP_006710628
          Length = 1426

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 976 TTEHTL 981
>XP_006710627
          Length = 1426

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 976 TTEHTL 981
>XP_006710626
          Length = 1426

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   TTDHTL 8
           TT+HTL
Sbjct: 976 TTEHTL 981
>NP_073585
          Length = 1445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TDHTLS 9
           +DHTLS
Sbjct: 383 SDHTLS 388
>NP_003310
          Length = 26926

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 19342 ISTDNHTL 19349
>NP_000183
          Length = 518

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   STTDH 6
           STTDH
Sbjct: 332 STTDH 336
>NP_001136233
          Length = 286

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   STTDH 6
           STTDH
Sbjct: 241 STTDH 245
>NP_852259
          Length = 518

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   STTDH 6
           STTDH
Sbjct: 332 STTDH 336
>NP_597676
          Length = 27051

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 19467 ISTDNHTL 19474
>NP_542448
          Length = 468

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   STTDH 6
           STTDH
Sbjct: 282 STTDH 286
>NP_001243779
          Length = 34350

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 26766 ISTDNHTL 26773
>NP_596869
          Length = 33423

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 25839 ISTDNHTL 25846
>NP_002402
          Length = 93

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  LSTTDHTLS 9
          L+ TD TLS
Sbjct: 67 LNQTDETLS 75
>NP_002967
          Length = 1682

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TDHTLS 9
           +DHTLS
Sbjct: 791 SDHTLS 796
>NP_150628
          Length = 316

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   STTDH 6
           STTDH
Sbjct: 241 STTDH 245
>NP_075563
          Length = 396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 339 ITPTDYTLS 347
>NP_073587
          Length = 701

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TTDHTLS 9
           TT+H LS
Sbjct: 119 TTEHNLS 125
>NP_001157934
          Length = 5335

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   STTDHTLS 9
           S+T HT+S
Sbjct: 719 SSTTHTIS 726

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    STTDHTLS 9
            S+T HT+S
Sbjct: 1802 SSTTHTIS 1809

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    STTDHTLS 9
            S+T HT+S
Sbjct: 3359 SSTTHTIS 3366

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    STTDHTLS 9
            S+T HT+S
Sbjct: 4442 SSTTHTIS 4449

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2    STTDHTLS 9
            S+T HT+S
Sbjct: 4635 SSTTHTIS 4642
>NP_001229833
          Length = 333

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 276 ITPTDYTLS 284
>XP_006722410
          Length = 374

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 317 ITPTDYTLS 325
>XP_006722409
          Length = 396

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 339 ITPTDYTLS 347
>XP_006722408
          Length = 397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 340 ITPTDYTLS 348
>XP_006722407
          Length = 397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 340 ITPTDYTLS 348
>XP_006722406
          Length = 397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 340 ITPTDYTLS 348
>XP_006722405
          Length = 397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 340 ITPTDYTLS 348
>XP_006722404
          Length = 397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 340 ITPTDYTLS 348
>XP_006722403
          Length = 397

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSTTDHTLS 9
           ++ TD+TLS
Sbjct: 340 ITPTDYTLS 348
>XP_005254813
          Length = 169

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2  STTDH 6
          STTDH
Sbjct: 94 STTDH 98
>XP_005274062
          Length = 120

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  LSTTDHTLS 9
          L+ TD TLS
Sbjct: 67 LNQTDETLS 75
>XP_005250097
          Length = 416

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TTDHTLS 9
           TT+H LS
Sbjct: 119 TTEHNLS 125
>XP_005250096
          Length = 420

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TTDHTLS 9
           TT+H LS
Sbjct: 119 TTEHNLS 125
>XP_005250095
          Length = 487

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   TTDHTLS 9
           TT+H LS
Sbjct: 119 TTEHNLS 125
>XP_005246888
          Length = 22663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 15079 ISTDNHTL 15086
>XP_006712788
          Length = 24022

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 16438 ISTDNHTL 16445
>XP_006712787
          Length = 33978

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 26394 ISTDNHTL 26401
>XP_006712786
          Length = 35484

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 27900 ISTDNHTL 27907
>XP_006712745
          Length = 1682

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TDHTLS 9
           +DHTLS
Sbjct: 791 SDHTLS 796
>XP_006712744
          Length = 1682

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TDHTLS 9
           +DHTLS
Sbjct: 791 SDHTLS 796
>XP_006712743
          Length = 1682

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TDHTLS 9
           +DHTLS
Sbjct: 791 SDHTLS 796
>NP_543146
          Length = 1393

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  LSTTDH 6
          LST+DH
Sbjct: 41 LSTSDH 46
>NP_001005187
          Length = 323

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  TTDHTLS 9
          T DHT+S
Sbjct: 87 TGDHTIS 93
>NP_001254479
          Length = 35991

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 28407 ISTDNHTL 28414
>NP_597681
          Length = 27118

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1     LSTTDHTL 8
             +ST +HTL
Sbjct: 19534 ISTDNHTL 19541
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.303    0.111    0.290 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 571,393
Number of extensions: 704
Number of successful extensions: 89
Number of sequences better than 10000.0: 85
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 89
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package