Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005148                                                              19     869
NP_009297                                                              19     869
NP_066267                                                              17    4312
XP_006717859                                                           17    4312
XP_006717858                                                           17    4312
XP_006717857                                                           17    4312
XP_006717856                                                           17    4312
XP_006717855                                                           17    4312
XP_006717854                                                           17    4312
XP_006717853                                                           17    4312
XP_006717852                                                           17    4312
XP_006717851                                                           17    4312
XP_006717850                                                           17    4312
XP_006717849                                                           17    4312
XP_006717848                                                           17    4312
XP_006717847                                                           17    4312
XP_006717846                                                           17    4312
XP_006717845                                                           17    4312
NP_005753                                                              17    4312
NP_001131022                                                           16    7355
NP_055542                                                              16    7355
XP_006723577                                                           16    7355
XP_006723576                                                           16    7355
XP_006712913                                                           16    7355
XP_005246195                                                           16    7355
XP_005246194                                                           16    7355
XP_006712912                                                           16    7355
XP_005246192                                                           16    7355
XP_005246191                                                           16    7355
XP_005246190                                                           16    7355
XP_006712911                                                           16    7355
XP_005246189                                                           16    7355
XP_006712910                                                           16    7355
XP_006712909                                                           16    7355
XP_005246187                                                           16    7355
XP_005246186                                                           16    7355
XP_006712908                                                           16    7355
XP_005246185                                                           16    7355
XP_006712907                                                           16    7355
XP_005246183                                                           16    7355
XP_005246182                                                           16    7355
XP_006712906                                                           16    7355
XP_005246181                                                           16    7355
XP_005246179                                                           16    7355
XP_005246178                                                           16    7355
XP_005246177                                                           16    7355
XP_005246176                                                           16    7355
XP_005246175                                                           16    7355
XP_006712905                                                           16    7355
XP_006712904                                                           16    7355
XP_005246174                                                           16    7355
XP_006712903                                                           16    7355
XP_005246173                                                           16    7355
XP_005246172                                                           16    7355
XP_005246171                                                           16    7355
XP_005246170                                                           16    7355
XP_005246169                                                           16    7355
NP_008851                                                              15    9605
NP_000325                                                              15    9605
NP_001189364                                                           15    9605
NP_001159436                                                           15    9605
NP_001159435                                                           15    9605
NP_002968                                                              15    9605
NP_008853                                                              15    9605
NP_001035232                                                           15    9605
NP_066287                                                              15    9605
NP_001075145                                                           15    9605
NP_057315                                                              15    9605
NP_001075146                                                           15    9605
NP_001035233                                                           15    9605
NP_004387                                                              15    9605
NP_001171455                                                           15    9605
NP_055006                                                              15    9605
NP_056503                                                              15    9605
NP_659570                                                              15    9605
NP_060932                                                              15    9605
XP_005257623                                                           15    9605
XP_005258045                                                           15    9605
XP_006721801                                                           15    9605
XP_005257168                                                           15    9605
XP_006719619                                                           15    9605
XP_005250300                                                           15    9605
XP_005250299                                                           15    9605
XP_006715978                                                           15    9605
XP_006715977                                                           15    9605
XP_006715976                                                           15    9605
XP_006715975                                                           15    9605
XP_005246814                                                           15    9605
XP_006712742                                                           15    9605
XP_005246811                                                           15    9605
XP_005246810                                                           15    9605
XP_005246808                                                           15    9605
XP_005246807                                                           15    9605
NP_055384                                                              15    9605
>NP_005148
          Length = 1130

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    LSSVKQISD 9
            LSSVK+ISD
Sbjct: 1118 LSSVKEISD 1126
>NP_009297
          Length = 1149

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    LSSVKQISD 9
            LSSVK+ISD
Sbjct: 1137 LSSVKEISD 1145
>NP_066267
          Length = 4377

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1559 SSVKSISD 1566
>XP_006717859
          Length = 2758

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1583 SSVKSISD 1590
>XP_006717858
          Length = 2775

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1583 SSVKSISD 1590
>XP_006717857
          Length = 2794

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1583 SSVKSISD 1590
>XP_006717856
          Length = 2833

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1583 SSVKSISD 1590
>XP_006717855
          Length = 2837

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1583 SSVKSISD 1590
>XP_006717854
          Length = 2852

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1583 SSVKSISD 1590
>XP_006717853
          Length = 2854

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1583 SSVKSISD 1590
>XP_006717852
          Length = 3508

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   SSVKQISD 9
           SSVK ISD
Sbjct: 690 SSVKSISD 697
>XP_006717851
          Length = 3513

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2   SSVKQISD 9
           SSVK ISD
Sbjct: 695 SSVKSISD 702
>XP_006717850
          Length = 4364

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1546 SSVKSISD 1553
>XP_006717849
          Length = 4383

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1565 SSVKSISD 1572
>XP_006717848
          Length = 4392

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1574 SSVKSISD 1581
>XP_006717847
          Length = 4395

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1577 SSVKSISD 1584
>XP_006717846
          Length = 4396

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1578 SSVKSISD 1585
>XP_006717845
          Length = 4397

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 2    SSVKQISD 9
            SSVK ISD
Sbjct: 1579 SSVKSISD 1586
>NP_005753
          Length = 835

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS++Q+SD
Sbjct: 279 SSIRQVSD 286
>NP_001131022
          Length = 640

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 388 SSIREISD 395
>NP_055542
          Length = 2715

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SVKQISD 9
           +VKQISD
Sbjct: 832 AVKQISD 838
>XP_006723577
          Length = 1951

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  SVKQISD 9
          +VKQISD
Sbjct: 64 AVKQISD 70
>XP_006723576
          Length = 2313

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   SVKQISD 9
           +VKQISD
Sbjct: 832 AVKQISD 838
>XP_006712913
          Length = 648

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 396 SSIREISD 403
>XP_005246195
          Length = 625

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 409 SSIREISD 416
>XP_005246194
          Length = 661

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 409 SSIREISD 416
>XP_006712912
          Length = 809

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 199 SSIREISD 206
>XP_005246192
          Length = 814

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 204 SSIREISD 211
>XP_005246191
          Length = 824

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 214 SSIREISD 221
>XP_005246190
          Length = 838

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 228 SSIREISD 235
>XP_006712911
          Length = 846

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 236 SSIREISD 243
>XP_005246189
          Length = 848

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 238 SSIREISD 245
>XP_006712910
          Length = 870

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 260 SSIREISD 267
>XP_006712909
          Length = 890

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 280 SSIREISD 287
>XP_005246187
          Length = 902

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 292 SSIREISD 299
>XP_005246186
          Length = 911

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 301 SSIREISD 308
>XP_006712908
          Length = 922

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 312 SSIREISD 319
>XP_005246185
          Length = 924

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 314 SSIREISD 321
>XP_006712907
          Length = 928

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 318 SSIREISD 325
>XP_005246183
          Length = 935

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 325 SSIREISD 332
>XP_005246182
          Length = 948

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 338 SSIREISD 345
>XP_006712906
          Length = 950

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 340 SSIREISD 347
>XP_005246181
          Length = 955

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 345 SSIREISD 352
>XP_005246179
          Length = 961

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 351 SSIREISD 358
>XP_005246178
          Length = 965

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 355 SSIREISD 362
>XP_005246177
          Length = 970

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 360 SSIREISD 367
>XP_005246176
          Length = 982

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 372 SSIREISD 379
>XP_005246175
          Length = 983

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 373 SSIREISD 380
>XP_006712905
          Length = 985

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 375 SSIREISD 382
>XP_006712904
          Length = 987

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 377 SSIREISD 384
>XP_005246174
          Length = 995

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 385 SSIREISD 392
>XP_006712903
          Length = 997

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 387 SSIREISD 394
>XP_005246173
          Length = 998

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 388 SSIREISD 395
>XP_005246172
          Length = 1004

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 394 SSIREISD 401
>XP_005246171
          Length = 1006

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 396 SSIREISD 403
>XP_005246170
          Length = 1009

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 399 SSIREISD 406
>XP_005246169
          Length = 1019

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           SS+++ISD
Sbjct: 409 SSIREISD 416
>NP_008851
          Length = 1998

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>NP_000325
          Length = 1836

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 244 IQSVKKLSD 252
>NP_001189364
          Length = 2009

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>NP_001159436
          Length = 1981

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>NP_001159435
          Length = 2009

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>NP_002968
          Length = 1977

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 239 IQSVKKLSD 247
>NP_008853
          Length = 2000

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>NP_001035232
          Length = 2005

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 242 IQSVKKLSD 250
>NP_066287
          Length = 2005

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 242 IQSVKKLSD 250
>NP_001075145
          Length = 1951

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>NP_057315
          Length = 527

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           LSSV+Q+ +
Sbjct: 471 LSSVRQVKE 479
>NP_001075146
          Length = 1951

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>NP_001035233
          Length = 2005

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 242 IQSVKKLSD 250
>NP_004387
          Length = 614

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           +++KQ+SD
Sbjct: 448 NNIKQVSD 455
>NP_001171455
          Length = 1939

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 245 IQSVKKLSD 253
>NP_055006
          Length = 1980

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 245 IQSVKKLSD 253
>NP_056503
          Length = 1060

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           L ++KQ+SD
Sbjct: 627 LQALKQLSD 635
>NP_659570
          Length = 839

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VKQISD 9
           VKQISD
Sbjct: 269 VKQISD 274
>NP_060932
          Length = 75

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  SSVKQISD 9
          SS+K+I+D
Sbjct: 27 SSIKKIAD 34
>XP_005257623
          Length = 1836

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 244 IQSVKKLSD 252
>XP_005258045
          Length = 498

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           LSSV+Q+ +
Sbjct: 442 LSSVRQVKE 450
>XP_006721801
          Length = 614

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           +++KQ+SD
Sbjct: 448 NNIKQVSD 455
>XP_005257168
          Length = 614

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 2   SSVKQISD 9
           +++KQ+SD
Sbjct: 448 NNIKQVSD 455
>XP_006719619
          Length = 1980

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 245 IQSVKKLSD 253
>XP_005250300
          Length = 575

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4  VKQISD 9
          VKQISD
Sbjct: 5  VKQISD 10
>XP_005250299
          Length = 766

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VKQISD 9
           VKQISD
Sbjct: 196 VKQISD 201
>XP_006715978
          Length = 766

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VKQISD 9
           VKQISD
Sbjct: 196 VKQISD 201
>XP_006715977
          Length = 838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VKQISD 9
           VKQISD
Sbjct: 268 VKQISD 273
>XP_006715976
          Length = 839

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VKQISD 9
           VKQISD
Sbjct: 269 VKQISD 274
>XP_006715975
          Length = 839

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VKQISD 9
           VKQISD
Sbjct: 269 VKQISD 274
>XP_005246814
          Length = 1988

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 239 IQSVKKLSD 247
>XP_006712742
          Length = 2000

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 241 IQSVKKLSD 249
>XP_005246811
          Length = 1995

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 232 IQSVKKLSD 240
>XP_005246810
          Length = 2005

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 242 IQSVKKLSD 250
>XP_005246808
          Length = 2005

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 242 IQSVKKLSD 250
>XP_005246807
          Length = 2005

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSSVKQISD 9
           + SVK++SD
Sbjct: 242 IQSVKKLSD 250
>NP_055384
          Length = 839

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   VKQISD 9
           VKQISD
Sbjct: 269 VKQISD 274
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.299    0.115    0.253 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 291,137
Number of extensions: 359
Number of successful extensions: 94
Number of sequences better than 10000.0: 94
Number of HSP's gapped: 94
Number of HSP's successfully gapped: 94
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.2 bits)
S2: 28 (15.4 bits)

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