Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 19 869 XP_005271924 19 869 XP_005271923 19 869 NP_689836 16 5631 NP_001139206 16 5631 NP_001163873 16 5631 NP_653317 16 5631 NP_036266 16 5631 NP_001264003 16 5631 XP_006713054 16 5631 NP_001796 16 7355 NP_057427 16 7355 NP_001123361 16 7355 NP_001913 16 7355 NP_001001669 16 7355 NP_005186 16 7355 XP_006715629 16 7355 XP_005268505 16 7355 XP_006714848 16 7355 XP_005268504 16 7355 XP_006714847 16 7355 NP_758455 16 7355 NP_078970 16 7355 NP_003633 15 9605 NP_001274353 15 9605 NP_001272758 15 9605 NP_001274364 15 9605 NP_004355 15 9605 NP_060396 15 9605 NP_001035810 15 9605 NP_000393 15 9605 NP_000691 15 9605 NP_689658 15 9605 NP_689632 15 9605 NP_060442 15 9605 NP_001107590 15 9605 XP_005274715 15 9605 XP_005274714 15 9605 XP_006721619 15 9605 XP_005256774 15 9605 XP_006720255 15 9605 XP_006720254 15 9605 XP_005273469 15 9605 XP_005273468 15 9605 XP_005273467 15 9605 XP_005273466 15 9605 XP_006712871 15 9605 XP_005275805 15 9605 NP_982248 15 9605>NP_001261 Length = 1710 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSRDLAKK 8 LSRDLAKK Sbjct: 1313 LSRDLAKK 1320>XP_005271924 Length = 1710 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSRDLAKK 8 LSRDLAKK Sbjct: 1313 LSRDLAKK 1320>XP_005271923 Length = 1798 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 LSRDLAKK 8 LSRDLAKK Sbjct: 1313 LSRDLAKK 1320>NP_689836 Length = 515 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKR 9 LS+DL +KR Sbjct: 28 LSKDLKQKR 36>NP_001139206 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKR 9 LS+DL +KR Sbjct: 28 LSKDLKQKR 36>NP_001163873 Length = 519 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKR 9 LS+DL +KR Sbjct: 28 LSKDLKQKR 36>NP_653317 Length = 179 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RD+AKK Sbjct: 129 LKRDVAKK 136>NP_036266 Length = 600 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSRDLAKKR 9 LSRD KKR Sbjct: 200 LSRDKDKKR 208>NP_001264003 Length = 166 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RD+AKK Sbjct: 116 LKRDVAKK 123>XP_006713054 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RD+AKK Sbjct: 129 LKRDVAKK 136>NP_001796 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD AK+R Sbjct: 221 SRDKAKRR 228>NP_057427 Length = 3114 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 S+DL KKR Sbjct: 570 SQDLLKKR 577>NP_001123361 Length = 552 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKR 9 DLAKKR Sbjct: 146 DLAKKR 151>NP_001913 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKR 9 DLAKKR Sbjct: 146 DLAKKR 151>NP_001001669 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 427 LQRDLAKQ 434>NP_005186 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD AK+R Sbjct: 208 SRDKAKRR 215>XP_006715629 Length = 1667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 +RD+ KKR Sbjct: 367 ARDIGKKR 374>XP_005268505 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 213 LQRDLAKQ 220>XP_006714848 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 390 LQRDLAKQ 397>XP_005268504 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 427 LQRDLAKQ 434>XP_006714847 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 427 LQRDLAKQ 434>NP_758455 Length = 138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L+RD AKK Sbjct: 31 LARDYAKK 38>NP_078970 Length = 1667 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 +RD+ KKR Sbjct: 367 ARDIGKKR 374>NP_003633 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDLAKKR 9 RDLAK R Sbjct: 368 RDLAKMR 374>NP_001274353 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD AK+R Sbjct: 334 SRDKAKQR 341>NP_001272758 Length = 239 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD AK+R Sbjct: 180 SRDKAKQR 187>NP_001274364 Length = 344 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD AK+R Sbjct: 285 SRDKAKQR 292>NP_004355 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD AK+R Sbjct: 299 SRDKAKQR 306>NP_060396 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD+ +KR Sbjct: 409 SRDIKRKR 416>NP_001035810 Length = 515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 S DLAKK+ Sbjct: 40 SGDLAKKK 47>NP_000393 Length = 545 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 S DLAKK+ Sbjct: 70 SGDLAKKK 77>NP_000691 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSRDLAK 7 L RDLAK Sbjct: 160 LKRDLAK 166>NP_689658 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSRDLAKK 8 +++DLAKK Sbjct: 616 VAKDLAKK 623>NP_689632 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDLAKKR 9 RDL KKR Sbjct: 39 RDLDKKR 45>NP_060442 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD+ +KR Sbjct: 404 SRDIKRKR 411>NP_001107590 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSRDLAKKR 9 + RD+ KKR Sbjct: 308 IQRDVIKKR 316>XP_005274715 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 S DLAKK+ Sbjct: 40 SGDLAKKK 47>XP_005274714 Length = 546 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 S DLAKK+ Sbjct: 70 SGDLAKKK 77>XP_006721619 Length = 497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSRDLAKKR 9 + RD+ KKR Sbjct: 173 IQRDVIKKR 181>XP_005256774 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSRDLAKKR 9 + RD+ KKR Sbjct: 308 IQRDVIKKR 316>XP_006720255 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD+ +KR Sbjct: 409 SRDIKRKR 416>XP_006720254 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SRDLAKKR 9 SRD+ +KR Sbjct: 404 SRDIKRKR 411>XP_005273469 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDLAKKR 9 RDL KKR Sbjct: 39 RDLDKKR 45>XP_005273468 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDLAKKR 9 RDL KKR Sbjct: 39 RDLDKKR 45>XP_005273467 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDLAKKR 9 RDL KKR Sbjct: 39 RDLDKKR 45>XP_005273466 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDLAKKR 9 RDL KKR Sbjct: 39 RDLDKKR 45>XP_006712871 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RDLAKKR 9 RDLAK R Sbjct: 362 RDLAKMR 368>XP_005275805 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 +SRD AKK Sbjct: 218 ISRDNAKK 225>NP_982248 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSRDLAKKR 9 LSR L KKR Sbjct: 81 LSRVLEKKR 89Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.131 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 479,670 Number of extensions: 966 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |