Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 19 665 XP_005271924 19 665 XP_005271923 19 665 NP_000882 17 4312 NP_001035810 17 4312 NP_000393 17 4312 XP_005274715 17 4312 XP_005274714 17 4312 NP_001009899 16 5631 NP_001241872 16 5631 NP_001129069 16 5631 NP_060554 16 5631 NP_653317 16 5631 NP_001264003 16 5631 NP_775794 16 5631 XP_005247266 16 5631 XP_005247265 16 5631 XP_006713054 16 5631 XP_005264484 16 5631 XP_005264483 16 5631 XP_005264480 16 5631 XP_005264478 16 5631 XP_005264475 16 5631 NP_002461 16 7355 NP_001136087 16 7355 NP_009120 16 7355 NP_056140 16 7355 NP_001136086 16 7355 NP_689658 16 7355 NP_001803 16 7355 NP_001001669 16 7355 NP_005683 16 7355 XP_006721591 16 7355 XP_006715887 16 7355 XP_005249988 16 7355 XP_005268505 16 7355 XP_006714848 16 7355 XP_005268504 16 7355 XP_006714847 16 7355 XP_006714128 16 7355 XP_006714127 16 7355 XP_006712034 16 7355 XP_005264284 16 7355 XP_005264283 16 7355 XP_005264282 16 7355 NP_001136088 16 7355 NP_758455 16 7355 NP_056067 16 7355 NP_689845 15 9605 NP_000691 15 9605 XP_005257093 15 9605 XP_005257092 15 9605 XP_005257091 15 9605 XP_005257090 15 9605 XP_005275805 15 9605 NP_859058 15 9605>NP_001261 Length = 1710 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSRDLAKKK 9 LSRDLAKK+ Sbjct: 1313 LSRDLAKKE 1321>XP_005271924 Length = 1710 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSRDLAKKK 9 LSRDLAKK+ Sbjct: 1313 LSRDLAKKE 1321>XP_005271923 Length = 1798 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSRDLAKKK 9 LSRDLAKK+ Sbjct: 1313 LSRDLAKKE 1321>NP_000882 Length = 427 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SRDLAKKK 9 +RDLA+KK Sbjct: 358 ARDLAEKK 365>NP_001035810 Length = 515 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SRDLAKKK 9 S DLAKKK Sbjct: 40 SGDLAKKK 47>NP_000393 Length = 545 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SRDLAKKK 9 S DLAKKK Sbjct: 70 SGDLAKKK 77>XP_005274715 Length = 516 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SRDLAKKK 9 S DLAKKK Sbjct: 40 SGDLAKKK 47>XP_005274714 Length = 546 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SRDLAKKK 9 S DLAKKK Sbjct: 70 SGDLAKKK 77>NP_001009899 Length = 2245 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L DLAKKK Sbjct: 1007 LLSDLAKKK 1015>NP_001241872 Length = 1796 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>NP_001129069 Length = 1870 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>NP_060554 Length = 1843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>NP_653317 Length = 179 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RD+AKK Sbjct: 129 LKRDVAKK 136>NP_001264003 Length = 166 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RD+AKK Sbjct: 116 LKRDVAKK 123>NP_775794 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 LS+D KKK Sbjct: 190 LSKDAVKKK 198>XP_005247266 Length = 2189 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L DLAKKK Sbjct: 951 LLSDLAKKK 959>XP_005247265 Length = 2211 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L DLAKKK Sbjct: 973 LLSDLAKKK 981>XP_006713054 Length = 211 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RD+AKK Sbjct: 129 LKRDVAKK 136>XP_005264484 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>XP_005264483 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>XP_005264480 Length = 1842 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>XP_005264478 Length = 1844 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>XP_005264475 Length = 2027 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LS+DL K+K Sbjct: 527 LSKDLMKEK 535>NP_002461 Length = 1940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 204 DLAKKK 209>NP_001136087 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 738 DLAKKK 743>NP_009120 Length = 623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 4 DLAKKK 9>NP_056140 Length = 2266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSRDLAKKK 9 LSR+L K+K Sbjct: 588 LSRELEKEK 596>NP_001136086 Length = 1196 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 738 DLAKKK 743>NP_689658 Length = 710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LSRDLAKKK 9 +++DLAKK+ Sbjct: 616 VAKDLAKKE 624>NP_001803 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 624 DLAKKK 629>NP_001001669 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 427 LQRDLAKQ 434>NP_005683 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 4 DLAKKK 9>XP_006721591 Length = 1940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 204 DLAKKK 209>XP_006715887 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 4 DLAKKK 9>XP_005249988 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 4 DLAKKK 9>XP_005268505 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 213 LQRDLAKQ 220>XP_006714848 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 390 LQRDLAKQ 397>XP_005268504 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 427 LQRDLAKQ 434>XP_006714847 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L RDLAK+ Sbjct: 427 LQRDLAKQ 434>XP_006714128 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 411 DLAKKK 416>XP_006714127 Length = 935 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 624 DLAKKK 629>XP_006712034 Length = 1195 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 773 DLAKKK 778>XP_005264284 Length = 1196 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 738 DLAKKK 743>XP_005264283 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 773 DLAKKK 778>XP_005264282 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 773 DLAKKK 778>NP_001136088 Length = 1160 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 738 DLAKKK 743>NP_758455 Length = 138 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 L+RD AKK Sbjct: 31 LARDYAKK 38>NP_056067 Length = 1231 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 DLAKKK 9 DLAKKK Sbjct: 773 DLAKKK 778>NP_689845 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RDLAKKK 9 +DLAK+K Sbjct: 549 KDLAKRK 555>NP_000691 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSRDLAK 7 L RDLAK Sbjct: 160 LKRDLAK 166>XP_005257093 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L RDL +KK Sbjct: 68 LPRDLPQKK 76>XP_005257092 Length = 209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L RDL +KK Sbjct: 31 LPRDLPQKK 39>XP_005257091 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L RDL +KK Sbjct: 101 LPRDLPQKK 109>XP_005257090 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L RDL +KK Sbjct: 101 LPRDLPQKK 109>XP_005275805 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSRDLAKK 8 +SRD AKK Sbjct: 218 ISRDNAKK 225>NP_859058 Length = 236 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSRDLAKKK 9 L RDL +KK Sbjct: 68 LPRDLPQKK 76Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.125 0.300 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 522,207 Number of extensions: 1141 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |