Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 390 XP_006716142 20 390 XP_005250088 20 390 XP_006716141 20 390 XP_005250085 20 390 XP_006716140 20 390 XP_005250084 20 390 XP_005250083 20 390 XP_005250082 20 390 NP_055061 17 2528 XP_006724446 17 2528 NP_001035521 17 4312 NP_689681 17 4312 NP_004426 17 4312 NP_005348 17 4312 NP_056284 17 4312 XP_005258994 17 4312 XP_006721788 17 4312 NP_004930 16 5631 NP_079350 16 5631 NP_001129628 16 5631 NP_078889 16 5631 NP_000772 16 5631 NP_001254514 16 5631 NP_001254515 16 5631 NP_001269469 16 5631 NP_055725 16 5631 XP_006723441 16 5631 XP_005259313 16 5631 XP_006721485 16 5631 XP_006721484 16 5631 XP_006721483 16 5631 XP_006720468 16 5631 XP_006720467 16 5631 XP_006714380 16 5631 XP_006714379 16 5631 XP_006714378 16 5631 XP_006714377 16 5631 NP_006373 16 5631 NP_077286 16 5631 NP_001141 16 7355 NP_004786 16 7355 NP_001186127 16 7355 NP_060779 16 7355 XP_005259906 16 7355 XP_005254949 16 7355 XP_006719958 16 7355 NP_001139627 15 9605 NP_001139626 15 9605 NP_001138820 15 9605 NP_079049 15 9605 NP_001263408 15 9605 NP_001263409 15 9605 NP_004784 15 9605 NP_689657 15 9605 XP_006721155 15 9605 NP_076957 15 9605>NP_733751 Length = 4911 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2494 SQERFLVP 2501>XP_006716142 Length = 4927 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2511 SQERFLVP 2518>XP_005250088 Length = 4928 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2511 SQERFLVP 2518>XP_006716141 Length = 4959 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2511 SQERFLVP 2518>XP_005250085 Length = 4979 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2511 SQERFLVP 2518>XP_006716140 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2511 SQERFLVP 2518>XP_005250084 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2511 SQERFLVP 2518>XP_005250083 Length = 4982 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2510 SQERFLVP 2517>XP_005250082 Length = 4983 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 SQERFLVP Sbjct: 2511 SQERFLVP 2518>NP_055061 Length = 3014 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSQERFLVP 9 +SQE+FL P Sbjct: 1214 MSQEKFLSP 1222>XP_006724446 Length = 3019 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSQERFLVP 9 +SQE+FL P Sbjct: 1214 MSQEKFLSP 1222>NP_001035521 Length = 106 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSQERFL 7 +SQERFL Sbjct: 79 ISQERFL 85>NP_689681 Length = 726 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSQERFLVP 9 L +E FLVP Sbjct: 464 LEREEFLVP 472>NP_004426 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFLVP Sbjct: 261 ERFLVP 266>NP_005348 Length = 1076 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQERFLVP 9 SQE FL P Sbjct: 83 SQEEFLAP 90>NP_056284 Length = 247 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QERFLVP 9 QE+FL+P Sbjct: 110 QEQFLIP 116>XP_005258994 Length = 1000 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SQERFLVP 9 SQE FL P Sbjct: 83 SQEEFLAP 90>XP_006721788 Length = 503 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSQERFLVP 9 L +E FLVP Sbjct: 241 LEREEFLVP 249>NP_004930 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 LSQ RFLV Sbjct: 361 LSQVRFLV 368>NP_079350 Length = 4012 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 3641 ERFLIP 3646>NP_001129628 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSQERFLV 8 LSQ+RFL+ Sbjct: 409 LSQKRFLM 416>NP_078889 Length = 249 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 S++RFL+P Sbjct: 187 SEKRFLLP 194>NP_000772 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 119 ERFLIP 124>NP_001254514 Length = 1052 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 +SQ RFLV Sbjct: 51 ISQRRFLV 58>NP_001254515 Length = 999 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 +SQ RFLV Sbjct: 51 ISQRRFLV 58>NP_001269469 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 +SQ RFLV Sbjct: 51 ISQRRFLV 58>NP_055725 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSQERFLV 8 LSQ+RFL+ Sbjct: 409 LSQKRFLM 416>XP_006723441 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 S++RFL+P Sbjct: 187 SRQRFLLP 194>XP_005259313 Length = 364 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 S++RFL+P Sbjct: 272 SRQRFLLP 279>XP_006721485 Length = 805 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 +SQ RFLV Sbjct: 51 ISQRRFLV 58>XP_006721484 Length = 997 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 +SQ RFLV Sbjct: 51 ISQRRFLV 58>XP_006721483 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 +SQ RFLV Sbjct: 51 ISQRRFLV 58>XP_006720468 Length = 433 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 31 ERFLIP 36>XP_006720467 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 48 ERFLIP 53>XP_006714380 Length = 3897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 3526 ERFLIP 3531>XP_006714379 Length = 3936 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 3565 ERFLIP 3570>XP_006714378 Length = 3965 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 3594 ERFLIP 3599>XP_006714377 Length = 4010 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ERFL+P Sbjct: 3639 ERFLIP 3644>NP_006373 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 +SQ RFLV Sbjct: 51 ISQRRFLV 58>NP_077286 Length = 279 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SQERFLVP 9 S++RFL+P Sbjct: 187 SRQRFLLP 194>NP_001141 Length = 967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 LSQE FL+ Sbjct: 561 LSQEHFLL 568>NP_004786 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSQERFLVP 9 LSQ++ L+P Sbjct: 482 LSQDKMLLP 490>NP_001186127 Length = 699 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSQERFLVP 9 L+ ER+L+P Sbjct: 669 LAIERYLIP 677>NP_060779 Length = 684 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSQERFLVP 9 L+ ER+L+P Sbjct: 654 LAIERYLIP 662>XP_005259906 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QERFLVP 9 +ERFL+P Sbjct: 28 RERFLLP 34>XP_005254949 Length = 967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSQERFLV 8 LSQE FL+ Sbjct: 561 LSQEHFLL 568>XP_006719958 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSQERFLVP 9 LSQ++ L+P Sbjct: 175 LSQDKMLLP 183>NP_001139627 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSQERFLV 8 +++ERFLV Sbjct: 282 ITRERFLV 289>NP_001139626 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSQERFLV 8 +++ERFLV Sbjct: 282 ITRERFLV 289>NP_001138820 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QERFLVP 9 +E+FLVP Sbjct: 234 REQFLVP 240>NP_079049 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QERFLVP 9 +E+FLVP Sbjct: 196 REQFLVP 202>NP_001263408 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ER+LVP Sbjct: 607 ERYLVP 612>NP_001263409 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ER+LVP Sbjct: 475 ERYLVP 480>NP_004784 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ERFLVP 9 ER+LVP Sbjct: 671 ERYLVP 676>NP_689657 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSQERFLV 8 +++ERFLV Sbjct: 282 ITRERFLV 289>XP_006721155 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QERFLVP 9 +E+FLVP Sbjct: 207 REQFLVP 213>NP_076957 Length = 300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 QERFLVP 9 +E+FLVP Sbjct: 236 KEQFLVP 242Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.144 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 533,504 Number of extensions: 979 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |