Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005742                                                              20     509
NP_671714                                                              20     509
XP_006715890                                                           20     509
XP_005250160                                                           20     509
XP_005250159                                                           20     509
NP_001258358                                                           17    2528
NP_001258357                                                           17    2528
NP_055862                                                              17    2528
NP_001258356                                                           17    2528
XP_006712581                                                           17    2528
XP_005246132                                                           17    2528
XP_005245845                                                           17    2528
XP_005245844                                                           17    2528
NP_001073973                                                           17    2528
NP_060650                                                              17    3301
NP_987090                                                              17    4312
NP_057272                                                              17    4312
NP_620155                                                              17    4312
NP_001157936                                                           17    4312
XP_005257840                                                           17    4312
XP_005254804                                                           17    4312
XP_006720791                                                           17    4312
XP_005254803                                                           17    4312
XP_005254800                                                           17    4312
XP_005254799                                                           17    4312
XP_005254415                                                           17    4312
XP_006716083                                                           17    4312
XP_006712770                                                           17    4312
XP_006712325                                                           17    4312
NP_003913                                                              17    4312
NP_776297                                                              16    5631
NP_001230301                                                           16    5631
NP_001820                                                              16    5631
NP_001230303                                                           16    5631
NP_038203                                                              16    5631
NP_002152                                                              16    5631
XP_005262783                                                           16    5631
NP_689518                                                              16    7355
NP_001273707                                                           16    7355
NP_113649                                                              16    7355
NP_001273706                                                           16    7355
NP_116561                                                              16    7355
NP_848639                                                              16    7355
NP_001276539                                                           16    7355
NP_001276538                                                           16    7355
NP_001276537                                                           16    7355
NP_001156425                                                           16    7355
NP_001156424                                                           16    7355
NP_001156423                                                           16    7355
NP_996813                                                              16    7355
NP_996812                                                              16    7355
XP_005258911                                                           16    7355
XP_005258910                                                           16    7355
XP_005274124                                                           16    7355
XP_006718653                                                           16    7355
XP_005274123                                                           16    7355
XP_005274120                                                           16    7355
XP_005274119                                                           16    7355
XP_005274118                                                           16    7355
XP_005274117                                                           16    7355
XP_005274116                                                           16    7355
XP_006718652                                                           16    7355
XP_005274115                                                           16    7355
XP_005274114                                                           16    7355
XP_006718635                                                           16    7355
XP_006716544                                                           16    7355
NP_115881                                                              16    7355
NP_001367                                                              15    9605
NP_000313                                                              15    9605
NP_065194                                                              15    9605
NP_001245143                                                           15    9605
NP_001245144                                                           15    9605
NP_001245145                                                           15    9605
NP_001550                                                              15    9605
NP_003317                                                              15    9605
NP_001152752                                                           15    9605
NP_002449                                                              15    9605
NP_001192136                                                           15    9605
NP_001012987                                                           15    9605
XP_005254263                                                           15    9605
XP_005254262                                                           15    9605
XP_005254261                                                           15    9605
XP_005263713                                                           15    9605
XP_005263712                                                           15    9605
XP_005245532                                                           15    9605
XP_006710680                                                           15    9605
XP_005270885                                                           15    9605
XP_005270884                                                           15    9605
XP_005270882                                                           15    9605
>NP_005742
          Length = 3907

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    LSIHYQMTN 9
            LSIH QMTN
Sbjct: 1305 LSIHSQMTN 1313
>NP_671714
          Length = 3899

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    LSIHYQMTN 9
            LSIH QMTN
Sbjct: 1305 LSIHSQMTN 1313
>XP_006715890
          Length = 3860

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    LSIHYQMTN 9
            LSIH QMTN
Sbjct: 1305 LSIHSQMTN 1313
>XP_005250160
          Length = 3939

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    LSIHYQMTN 9
            LSIH QMTN
Sbjct: 1305 LSIHSQMTN 1313
>XP_005250159
          Length = 3952

 Score = 19.6 bits (39), Expect =   509
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1    LSIHYQMTN 9
            LSIH QMTN
Sbjct: 1305 LSIHSQMTN 1313
>NP_001258358
          Length = 971

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           SIHYQM
Sbjct: 150 SIHYQM 155
>NP_001258357
          Length = 992

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           SIHYQM
Sbjct: 172 SIHYQM 177
>NP_055862
          Length = 993

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           SIHYQM
Sbjct: 172 SIHYQM 177
>NP_001258356
          Length = 992

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           SIHYQM
Sbjct: 172 SIHYQM 177
>XP_006712581
          Length = 1047

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LSIHYQM 7
           L++HYQM
Sbjct: 612 LNVHYQM 618
>XP_005246132
          Length = 1047

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LSIHYQM 7
           L++HYQM
Sbjct: 612 LNVHYQM 618
>XP_005245845
          Length = 995

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           SIHYQM
Sbjct: 172 SIHYQM 177
>XP_005245844
          Length = 996

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           SIHYQM
Sbjct: 172 SIHYQM 177
>NP_001073973
          Length = 1052

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   LSIHYQM 7
           L++HYQM
Sbjct: 612 LNVHYQM 618
>NP_060650
          Length = 743

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LSIHYQ 6
           LSIHYQ
Sbjct: 104 LSIHYQ 109
>NP_987090
          Length = 334

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   IHYQMTN 9
           IHY +TN
Sbjct: 283 IHYPLTN 289
>NP_057272
          Length = 426

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   SIHYQMTN 9
           ++HY+M N
Sbjct: 281 TVHYEMPN 288
>NP_620155
          Length = 446

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   LSIHYQMTN 9
           +S H+++TN
Sbjct: 289 ISFHFEVTN 297
>NP_001157936
          Length = 446

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   LSIHYQMTN 9
           +S H+++TN
Sbjct: 289 ISFHFEVTN 297
>XP_005257840
          Length = 488

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   SIHYQMTN 9
           S+H Q+TN
Sbjct: 447 SLHLQLTN 454
>XP_005254804
          Length = 4796

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    LSIHYQ 6
            LS+HYQ
Sbjct: 1696 LSVHYQ 1701
>XP_006720791
          Length = 4853

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    LSIHYQ 6
            LS+HYQ
Sbjct: 1761 LSVHYQ 1766
>XP_005254803
          Length = 4854

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    LSIHYQ 6
            LS+HYQ
Sbjct: 1761 LSVHYQ 1766
>XP_005254800
          Length = 4861

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    LSIHYQ 6
            LS+HYQ
Sbjct: 1761 LSVHYQ 1766
>XP_005254799
          Length = 4861

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    LSIHYQ 6
            LS+HYQ
Sbjct: 1761 LSVHYQ 1766
>XP_005254415
          Length = 339

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   IHYQMTN 9
           IHY +TN
Sbjct: 288 IHYPLTN 294
>XP_006716083
          Length = 474

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   SIHYQMTN 9
           ++HY+M N
Sbjct: 329 TVHYEMPN 336
>XP_006712770
          Length = 446

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   LSIHYQMTN 9
           +S H+++TN
Sbjct: 289 ISFHFEVTN 297
>XP_006712325
          Length = 446

 Score = 16.5 bits (31), Expect =  4312
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   LSIHYQMTN 9
           +S H+++TN
Sbjct: 289 ISFHFEVTN 297
>NP_003913
          Length = 4861

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    LSIHYQ 6
            LS+HYQ
Sbjct: 1761 LSVHYQ 1766
>NP_776297
          Length = 866

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  HYQMTN 9
          HY MTN
Sbjct: 56 HYTMTN 61
>NP_001230301
          Length = 791

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  HYQMTN 9
          HY MTN
Sbjct: 56 HYTMTN 61
>NP_001820
          Length = 818

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  HYQMTN 9
          HY MTN
Sbjct: 56 HYTMTN 61
>NP_001230303
          Length = 791

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  HYQMTN 9
          HY MTN
Sbjct: 29 HYTMTN 34
>NP_038203
          Length = 1262

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LSIHYQM 7
           LSIHY M
Sbjct: 799 LSIHYLM 805
>NP_002152
          Length = 1262

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   LSIHYQM 7
           LSIHY M
Sbjct: 799 LSIHYLM 805
>XP_005262783
          Length = 839

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  HYQMTN 9
          HY MTN
Sbjct: 29 HYTMTN 34
>NP_689518
          Length = 392

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1  LSIHYQMT 8
          L  HYQ+T
Sbjct: 85 LGTHYQIT 92
>NP_001273707
          Length = 312

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           S+HY+M
Sbjct: 139 SVHYEM 144
>NP_113649
          Length = 500

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           S+HY+M
Sbjct: 327 SVHYEM 332
>NP_001273706
          Length = 314

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           S+HY+M
Sbjct: 141 SVHYEM 146
>NP_116561
          Length = 910

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 845 HYKLTN 850
>NP_848639
          Length = 836

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 340 LHYQLT 345
>NP_001276539
          Length = 336

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 271 HYKLTN 276
>NP_001276538
          Length = 255

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 190 HYKLTN 195
>NP_001276537
          Length = 902

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 837 HYKLTN 842
>NP_001156425
          Length = 935

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 870 HYKLTN 875
>NP_001156424
          Length = 336

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 271 HYKLTN 276
>NP_001156423
          Length = 934

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 869 HYKLTN 874
>NP_996813
          Length = 365

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 300 HYKLTN 305
>NP_996812
          Length = 376

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 311 HYKLTN 316
>XP_005258911
          Length = 798

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 302 LHYQLT 307
>XP_005258910
          Length = 810

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 314 LHYQLT 319
>XP_005274124
          Length = 376

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 311 HYKLTN 316
>XP_006718653
          Length = 376

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 311 HYKLTN 316
>XP_005274123
          Length = 894

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 829 HYKLTN 834
>XP_005274120
          Length = 911

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 846 HYKLTN 851
>XP_005274119
          Length = 924

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 859 HYKLTN 864
>XP_005274118
          Length = 950

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 885 HYKLTN 890
>XP_005274117
          Length = 951

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   HYQMTN 9
           HY++TN
Sbjct: 886 HYKLTN 891
>XP_005274116
          Length = 1602

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4    HYQMTN 9
            HY++TN
Sbjct: 1537 HYKLTN 1542
>XP_006718652
          Length = 2196

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4    HYQMTN 9
            HY++TN
Sbjct: 2131 HYKLTN 2136
>XP_005274115
          Length = 2222

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4    HYQMTN 9
            HY++TN
Sbjct: 2157 HYKLTN 2162
>XP_005274114
          Length = 2223

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4    HYQMTN 9
            HY++TN
Sbjct: 2158 HYKLTN 2163
>XP_006718635
          Length = 607

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  SIHYQM 7
          SIHYQ+
Sbjct: 12 SIHYQI 17
>XP_006716544
          Length = 416

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   SIHYQM 7
           S+HY+M
Sbjct: 243 SVHYEM 248
>NP_115881
          Length = 183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1  LSIHYQMT 8
          +++HYQM+
Sbjct: 23 VAMHYQMS 30
>NP_001367
          Length = 4646

 Score = 15.4 bits (28), Expect =  9605
 Identities = 3/8 (37%), Positives = 7/8 (87%)

Query: 1    LSIHYQMT 8
            + +HY++T
Sbjct: 1006 VGVHYELT 1013
>NP_000313
          Length = 346

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   IHYQMTN 9
           I YQ+TN
Sbjct: 223 IQYQITN 229
>NP_065194
          Length = 1819

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   LSIHYQMTN 9
           LS+H Q+T+
Sbjct: 823 LSVHPQVTS 831
>NP_001245143
          Length = 659

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
>NP_001245144
          Length = 776

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
>NP_001245145
          Length = 635

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
>NP_001550
          Length = 862

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
>NP_003317
          Length = 183

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   LSIHYQ 6
           +S+HYQ
Sbjct: 115 ISLHYQ 120
>NP_001152752
          Length = 328

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  LSIHYQMT 8
          L IH QMT
Sbjct: 46 LKIHDQMT 53
>NP_002449
          Length = 5762

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1    LSIHYQ 6
            LSIHY+
Sbjct: 5136 LSIHYK 5141
>NP_001192136
          Length = 551

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  SIHYQMTN 9
          SIH ++TN
Sbjct: 19 SIHSEVTN 26
>NP_001012987
          Length = 267

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  LSIHYQMT 8
          L IH QMT
Sbjct: 46 LKIHDQMT 53
>XP_005254263
          Length = 258

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  LSIHYQMT 8
          L IH QMT
Sbjct: 46 LKIHDQMT 53
>XP_005254262
          Length = 280

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  LSIHYQMT 8
          L IH QMT
Sbjct: 46 LKIHDQMT 53
>XP_005254261
          Length = 355

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  LSIHYQMT 8
          L IH QMT
Sbjct: 46 LKIHDQMT 53
>XP_005263713
          Length = 317

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  LSIHYQMTN 9
          L + YQMT+
Sbjct: 39 LMVFYQMTS 47
>XP_005263712
          Length = 317

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  LSIHYQMTN 9
          L + YQMT+
Sbjct: 39 LMVFYQMTS 47
>XP_005245532
          Length = 133

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  LSIHYQ 6
          +S+HYQ
Sbjct: 65 ISLHYQ 70
>XP_006710680
          Length = 776

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
>XP_005270885
          Length = 862

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
>XP_005270884
          Length = 862

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
>XP_005270882
          Length = 862

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   IHYQMT 8
           +HYQ+T
Sbjct: 358 LHYQVT 363
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.324    0.127    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 556,233
Number of extensions: 865
Number of successful extensions: 89
Number of sequences better than 10000.0: 89
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 89
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.1 bits)
S2: 28 (15.4 bits)

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