Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_659424 17 2528 NP_000427 17 3301 NP_003136 17 3301 NP_001269596 17 3301 NP_001269595 17 3301 XP_005253308 17 3301 NP_071403 17 3301 NP_073581 17 4312 XP_006718977 17 4312 NP_001010892 16 5631 NP_001948 16 5631 NP_065882 16 5631 NP_001269589 16 5631 NP_001269590 16 5631 NP_055085 16 5631 NP_001229965 16 5631 NP_001119807 16 5631 NP_001019572 16 5631 XP_005261751 16 5631 XP_005261749 16 5631 XP_005261748 16 5631 XP_006723055 16 5631 XP_005258525 16 5631 XP_005255372 16 5631 NP_001866 16 7355 NP_001025169 16 7355 NP_006523 16 7355 NP_059138 16 7355 NP_003671 16 7355 NP_001258940 16 7355 NP_001265585 16 7355 NP_004166 16 7355 NP_001116105 16 7355 NP_001116106 16 7355 NP_778226 16 7355 NP_055041 16 7355 NP_001271337 16 7355 NP_001271336 16 7355 NP_001271335 16 7355 NP_060776 16 7355 XP_006720291 16 7355 XP_006720290 16 7355 XP_006720289 16 7355 XP_006720288 16 7355 XP_005263333 16 7355 XP_005247167 16 7355 XP_006713312 16 7355 NP_001360 15 9605 NP_001004196 15 9605 NP_055571 15 9605 NP_001008938 15 9605 NP_001135817 15 9605 NP_001135815 15 9605 NP_001135816 15 9605 NP_057209 15 9605 NP_612213 15 9605 NP_068373 15 9605 NP_001193856 15 9605 XP_006723231 15 9605 XP_005258877 15 9605 XP_005258876 15 9605 XP_006715067 15 9605 XP_005248319 15 9605 XP_006713711 15 9605 XP_005247538 15 9605 NP_004063 15 9605 NP_054756 15 9605>NP_659424 Length = 202 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SIGVPLLT 9 +IGVPL+T Sbjct: 150 TIGVPLIT 157>NP_000427 Length = 520 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSIGVPLL 8 L IG+PLL Sbjct: 321 LGIGIPLL 328>NP_003136 Length = 183 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SIGVPLL 8 SIG+PLL Sbjct: 160 SIGIPLL 166>NP_001269596 Length = 955 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSIGVPLL 8 LS+G+PLL Sbjct: 914 LSLGLPLL 921>NP_001269595 Length = 976 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSIGVPLL 8 LS+G+PLL Sbjct: 935 LSLGLPLL 942>XP_005253308 Length = 1012 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSIGVPLL 8 LS+G+PLL Sbjct: 971 LSLGLPLL 978>NP_071403 Length = 517 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSIGVPLL 8 L IG+PLL Sbjct: 318 LGIGIPLL 325>NP_073581 Length = 468 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSIGVPL 7 LS+GVPL Sbjct: 327 LSLGVPL 333>XP_006718977 Length = 293 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SIGVPLLT 9 S+G+PL+T Sbjct: 30 SLGLPLIT 37>NP_001010892 Length = 716 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 +G+PLLT Sbjct: 587 VGLPLLT 593>NP_001948 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 IG+PL+T Sbjct: 196 IGIPLVT 202>NP_065882 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S G+PLLT Sbjct: 821 STGLPLLT 828>NP_001269589 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S G+PLLT Sbjct: 821 STGLPLLT 828>NP_001269590 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S G+PLLT Sbjct: 771 STGLPLLT 778>NP_055085 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 IG+PL+T Sbjct: 258 IGIPLVT 264>NP_001229965 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 IG+PL+T Sbjct: 258 IGIPLVT 264>NP_001119807 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 IG+PL+T Sbjct: 258 IGIPLVT 264>NP_001019572 Length = 424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 GVPLLT Sbjct: 28 GVPLLT 33>XP_005261751 Length = 931 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S G+PLLT Sbjct: 821 STGLPLLT 828>XP_005261749 Length = 958 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S G+PLLT Sbjct: 848 STGLPLLT 855>XP_005261748 Length = 966 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S G+PLLT Sbjct: 856 STGLPLLT 863>XP_006723055 Length = 260 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 IG+PL+T Sbjct: 31 IGIPLVT 37>XP_005258525 Length = 278 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 IG+PL+T Sbjct: 49 IGIPLVT 55>XP_005255372 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 GVPLLT Sbjct: 62 GVPLLT 67>NP_001866 Length = 1500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 1460 GIPLLT 1465>NP_001025169 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LSIGVPLL 8 L++G+P+L Sbjct: 280 LTLGIPML 287>NP_006523 Length = 621 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IGVPLLT 9 +G+PLLT Sbjct: 425 LGLPLLT 431>NP_059138 Length = 1032 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSIGVPLL 8 L +GVP+L Sbjct: 828 LGLGVPML 835>NP_003671 Length = 528 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SIGVPL 7 SIGVPL Sbjct: 107 SIGVPL 112>NP_001258940 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 216 GIPLLT 221>NP_001265585 Length = 126 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSIGVPL 7 +SIGVP+ Sbjct: 1 MSIGVPI 7>NP_004166 Length = 126 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSIGVPL 7 +SIGVP+ Sbjct: 1 MSIGVPI 7>NP_001116105 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 1466 GIPLLT 1471>NP_001116106 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 1009 GIPLLT 1014>NP_778226 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 SIG+PL T Sbjct: 222 SIGLPLKT 229>NP_055041 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 246 GIPLLT 251>NP_001271337 Length = 157 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSIGVPLLT 9 +S+GV LLT Sbjct: 109 MSLGVGLLT 117>NP_001271336 Length = 203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSIGVPLLT 9 +S+GV LLT Sbjct: 155 MSLGVGLLT 163>NP_001271335 Length = 249 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSIGVPLLT 9 +S+GV LLT Sbjct: 201 MSLGVGLLT 209>NP_060776 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSIGVPLLT 9 +S+GV LLT Sbjct: 185 MSLGVGLLT 193>XP_006720291 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 64 GIPLLT 69>XP_006720290 Length = 237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 64 GIPLLT 69>XP_006720289 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 246 GIPLLT 251>XP_006720288 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GVPLLT 9 G+PLLT Sbjct: 246 GIPLLT 251>XP_005263333 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 LSIGVPLL 8 L++G+P+L Sbjct: 280 LTLGIPML 287>XP_005247167 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 SIG+PL T Sbjct: 206 SIGLPLKT 213>XP_006713312 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSIGVPLLT 9 +S+GV LLT Sbjct: 185 MSLGVGLLT 193>NP_001360 Length = 4624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSIGVPLL 8 LS+G PLL Sbjct: 3641 LSLGRPLL 3648>NP_001004196 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 +IG PLLT Sbjct: 9 TIGGPLLT 16>NP_055571 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SIGVPLLT 9 ++G+P++T Sbjct: 941 NLGIPIIT 948>NP_001008938 Length = 2032 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 8/8 (100%) Query: 2 SIGVPLLT 9 ++G+P++T Sbjct: 941 NLGIPIIT 948>NP_001135817 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S+G+PL T Sbjct: 295 SLGLPLAT 302>NP_001135815 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S+G+PL T Sbjct: 295 SLGLPLAT 302>NP_001135816 Length = 373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S+G+PL T Sbjct: 295 SLGLPLAT 302>NP_057209 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSIGVPLLT 9 +S+G+ LLT Sbjct: 173 ISLGIGLLT 181>NP_612213 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 SIGVPLL 8 S+G+P+L Sbjct: 333 SVGIPVL 339>NP_068373 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IGVPLLT 9 IG PLLT Sbjct: 270 IGPPLLT 276>NP_001193856 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSIGVPLL 8 LS+G PLL Sbjct: 3723 LSLGRPLL 3730>XP_006723231 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IGVPLL 8 +GVPLL Sbjct: 152 VGVPLL 157>XP_005258877 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IGVPLL 8 +GVPLL Sbjct: 152 VGVPLL 157>XP_005258876 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IGVPLL 8 +GVPLL Sbjct: 234 VGVPLL 239>XP_006715067 Length = 4707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSIGVPLL 8 LS+G PLL Sbjct: 3723 LSLGRPLL 3730>XP_005248319 Length = 4609 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSIGVPLL 8 LS+G PLL Sbjct: 3626 LSLGRPLL 3633>XP_006713711 Length = 176 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 +IG PLLT Sbjct: 9 TIGGPLLT 16>XP_005247538 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 +IG PLLT Sbjct: 9 TIGGPLLT 16>NP_004063 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SIGVPLLT 9 S+G+PL T Sbjct: 293 SLGLPLAT 300>NP_054756 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IGVPLL 8 +GVPLL Sbjct: 152 VGVPLL 157Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.149 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 649,821 Number of extensions: 1036 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |