Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001177203 16 5631 NP_079409 16 5631 NP_000487 16 5631 NP_002842 16 5631 NP_001193767 16 5631 XP_006724204 16 5631 XP_005256679 16 5631 XP_006716139 16 5631 XP_005250576 16 5631 XP_005264631 16 5631 XP_005264630 16 5631 XP_005264629 16 5631 NP_001193768 16 5631 NP_001108446 16 5631 NP_899236 16 7355 NP_001714 16 7355 NP_056363 16 7355 NP_001138241 16 7355 NP_001138242 16 7355 NP_066958 16 7355 NP_001006933 16 7355 NP_001093259 16 7355 NP_001093258 16 7355 NP_001093257 16 7355 NP_000864 16 7355 XP_005267149 16 7355 XP_006715612 16 7355 XP_006715232 16 7355 XP_005249383 16 7355 XP_005249382 16 7355 XP_005249381 16 7355 XP_005249380 16 7355 XP_005249379 16 7355 XP_005249377 16 7355 XP_005249376 16 7355 XP_005249375 16 7355 XP_005249374 16 7355 XP_005249373 16 7355 XP_005249372 16 7355 XP_005249371 16 7355 XP_005249370 16 7355 XP_005249369 16 7355 XP_005249368 16 7355 XP_005249367 16 7355 NP_001093256 16 7355 NP_006845 15 9605 NP_001094073 15 9605 NP_653299 15 9605 NP_057839 15 9605 NP_001267728 15 9605 NP_006846 15 9605 NP_006599 15 9605 NP_002282 15 9605 NP_009077 15 9605 NP_006792 15 9605 NP_075463 15 9605 XP_005257701 15 9605 XP_005257700 15 9605 XP_006719812 15 9605 XP_006710360 15 9605 XP_005270444 15 9605 XP_006710359 15 9605 XP_005270442 15 9605 XP_005270441 15 9605 XP_005270440 15 9605 NP_001004740 15 9605>NP_001177203 Length = 927 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SGKSQ L+ Sbjct: 139 VSGKSQDLS 147>NP_079409 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SGKSQ L+ Sbjct: 55 VSGKSQDLS 63>NP_000487 Length = 205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGKSQSLN 9 +GK QSLN Sbjct: 9 AGKPQSLN 16>NP_002842 Length = 2315 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 LSG ++SLN Sbjct: 553 LSGTAESLN 561>NP_001193767 Length = 1455 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 LSG ++SLN Sbjct: 553 LSGTAESLN 561>XP_006724204 Length = 205 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGKSQSLN 9 +GK QSLN Sbjct: 9 AGKPQSLN 16>XP_005256679 Length = 380 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 LSG+ QSL+ Sbjct: 128 LSGRGQSLD 136>XP_006716139 Length = 1869 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 LSG ++SLN Sbjct: 553 LSGTAESLN 561>XP_005250576 Length = 2308 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 LSG ++SLN Sbjct: 553 LSGTAESLN 561>XP_005264631 Length = 926 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SGKSQ L+ Sbjct: 139 VSGKSQDLS 147>XP_005264630 Length = 953 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SGKSQ L+ Sbjct: 139 VSGKSQDLS 147>XP_005264629 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SGKSQ L+ Sbjct: 139 VSGKSQDLS 147>NP_001193768 Length = 1448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 LSG ++SLN Sbjct: 553 LSGTAESLN 561>NP_001108446 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 LSG+ QSL+ Sbjct: 128 LSGRGQSLD 136>NP_899236 Length = 5497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 499 ISGITQSLN 507>NP_001714 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 173 ISGITQSLN 181>NP_056363 Length = 5171 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 173 ISGITQSLN 181>NP_001138241 Length = 5675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 677 ISGITQSLN 685>NP_001138242 Length = 5537 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 539 ISGITQSLN 547>NP_066958 Length = 733 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSGKSQSL 8 LSG++QSL Sbjct: 282 LSGEAQSL 289>NP_001006933 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSGKSQSL 8 LSG++QSL Sbjct: 290 LSGEAQSL 297>NP_001093259 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGKSQSLN 9 SGK +S+N Sbjct: 96 SGKQESMN 103>NP_001093258 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGKSQSLN 9 SGK +S+N Sbjct: 96 SGKQESMN 103>NP_001093257 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGKSQSLN 9 SGK +S+N Sbjct: 96 SGKQESMN 103>NP_000864 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGKSQSLN 9 SGK +S+N Sbjct: 96 SGKQESMN 103>XP_005267149 Length = 758 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSGKSQSL 8 LSG++QSL Sbjct: 307 LSGEAQSL 314>XP_006715612 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSGKSQSL 8 LSG++QSL Sbjct: 310 LSGEAQSL 317>XP_006715232 Length = 7498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 499 ISGITQSLN 507>XP_005249383 Length = 3186 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 710 ISGITQSLN 718>XP_005249382 Length = 5732 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 710 ISGITQSLN 718>XP_005249381 Length = 7281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 173 ISGITQSLN 181>XP_005249380 Length = 7607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 499 ISGITQSLN 507>XP_005249379 Length = 7633 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 525 ISGITQSLN 533>XP_005249377 Length = 7640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 532 ISGITQSLN 540>XP_005249376 Length = 7647 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 539 ISGITQSLN 547>XP_005249375 Length = 7680 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 572 ISGITQSLN 580>XP_005249374 Length = 7709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 710 ISGITQSLN 718>XP_005249373 Length = 7723 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 615 ISGITQSLN 623>XP_005249372 Length = 7785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 677 ISGITQSLN 685>XP_005249371 Length = 7788 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 710 ISGITQSLN 718>XP_005249370 Length = 7794 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 710 ISGITQSLN 718>XP_005249369 Length = 7797 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 689 ISGITQSLN 697>XP_005249368 Length = 7812 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 710 ISGITQSLN 718>XP_005249367 Length = 7818 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG +QSLN Sbjct: 710 ISGITQSLN 718>NP_001093256 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SGKSQSLN 9 SGK +S+N Sbjct: 96 SGKQESMN 103>NP_006845 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 +SGKSQ L Sbjct: 32 ISGKSQLL 39>NP_001094073 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 +SGKSQ L Sbjct: 32 ISGKSQLL 39>NP_653299 Length = 1001 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 +SGKSQ + Sbjct: 800 MSGKSQEI 807>NP_057839 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 +SGKSQ L Sbjct: 32 ISGKSQIL 39>NP_001267728 Length = 911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 +SGKSQ + Sbjct: 710 MSGKSQEI 717>NP_006846 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 +SGKSQ L Sbjct: 32 ISGKSQIL 39>NP_006599 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG S+SLN Sbjct: 355 VSGGSRSLN 363>NP_002282 Length = 1786 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 L+GK QSL+ Sbjct: 1381 LAGKLQSLD 1389>NP_009077 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSQSLN 9 G+SQS+N Sbjct: 309 GQSQSIN 315>NP_006792 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 +SGKSQ L Sbjct: 32 ISGKSQVL 39>NP_075463 Length = 3013 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSGKSQSLN 9 LSG + SLN Sbjct: 2504 LSGSTPSLN 2512>XP_005257701 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSQSLN 9 G+SQS+N Sbjct: 306 GQSQSIN 312>XP_005257700 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKSQSLN 9 G+SQS+N Sbjct: 315 GQSQSIN 321>XP_006719812 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSGKSQSLN 9 LSG + SLN Sbjct: 2504 LSGSTPSLN 2512>XP_006710360 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG S+SLN Sbjct: 355 VSGGSRSLN 363>XP_005270444 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG S+SLN Sbjct: 355 VSGGSRSLN 363>XP_006710359 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG S+SLN Sbjct: 313 VSGGSRSLN 321>XP_005270442 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG S+SLN Sbjct: 326 VSGGSRSLN 334>XP_005270441 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG S+SLN Sbjct: 355 VSGGSRSLN 363>XP_005270440 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSGKSQSLN 9 +SG S+SLN Sbjct: 355 VSGGSRSLN 363>NP_001004740 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 LSGKSQSL 8 LSG SQSL Sbjct: 154 LSGFSQSL 161Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.290 0.110 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 521,028 Number of extensions: 719 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |