Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006056 19 869 XP_005260701 19 869 XP_005260700 19 869 XP_005260698 19 869 XP_006710313 19 869 NP_001077379 19 869 NP_079133 18 1482 NP_055632 17 4312 NP_003371 16 5631 NP_001116325 16 5631 NP_056011 16 5631 NP_001124479 16 5631 NP_588612 16 5631 XP_006717563 16 5631 XP_005262928 16 5631 XP_005262927 16 5631 XP_005262926 16 5631 NP_001231118 16 7355 NP_001231121 16 7355 NP_055564 16 7355 NP_001231119 16 7355 NP_001231120 16 7355 NP_001231122 16 7355 NP_079082 16 7355 NP_851825 16 7355 NP_001229347 16 7355 NP_001229346 16 7355 NP_001229345 16 7355 NP_653175 16 7355 NP_851808 16 7355 XP_006720406 16 7355 XP_006720405 16 7355 XP_006720404 16 7355 XP_006720403 16 7355 XP_006720402 16 7355 XP_006720401 16 7355 XP_006720400 16 7355 XP_006720399 16 7355 XP_006720376 16 7355 XP_006720375 16 7355 XP_006720374 16 7355 XP_006720373 16 7355 XP_006720372 16 7355 XP_006720371 16 7355 XP_006720370 16 7355 XP_006720369 16 7355 XP_005271738 16 7355 XP_006718978 16 7355 XP_005271736 16 7355 XP_005271737 16 7355 NP_570124 15 9605 NP_000634 15 9605 NP_000635 15 9605 NP_000636 15 9605 NP_000019 15 9605 NP_000637 15 9605 NP_000633 15 9605 NP_004085 15 9605 NP_055887 15 9605 NP_694962 15 9605 NP_073613 15 9605 NP_001157918 15 9605 XP_006715913 15 9605 XP_005270614 15 9605 NP_060918 15 9605>NP_006056 Length = 398 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LSELSKRNN 9 +SEL+KRNN Sbjct: 92 VSELTKRNN 100>XP_005260701 Length = 180 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LSELSKRNN 9 +SEL+KRNN Sbjct: 91 VSELTKRNN 99>XP_005260700 Length = 286 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LSELSKRNN 9 +SEL+KRNN Sbjct: 91 VSELTKRNN 99>XP_005260698 Length = 397 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LSELSKRNN 9 +SEL+KRNN Sbjct: 91 VSELTKRNN 99>XP_006710313 Length = 160 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LSELSKRNN 9 +SEL+KRNN Sbjct: 75 VSELTKRNN 83>NP_001077379 Length = 181 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LSELSKRNN 9 +SEL+KRNN Sbjct: 92 VSELTKRNN 100>NP_079133 Length = 1844 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 ELSKRNN 9 ELSKRNN Sbjct: 1029 ELSKRNN 1035>NP_055632 Length = 811 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSELSKRNN 9 L ELS RNN Sbjct: 327 LRELSLRNN 335>NP_003371 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSELSKRNN 9 LSE + RNN Sbjct: 298 LSEAANRNN 306>NP_001116325 Length = 251 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSELSKRNN 9 + ELS RNN Sbjct: 38 MEELSLRNN 46>NP_056011 Length = 1609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSELSKRNN 9 L E+S++NN Sbjct: 1130 LPEISRKNN 1138>NP_001124479 Length = 1610 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSELSKRNN 9 L E+S++NN Sbjct: 1131 LPEISRKNN 1139>NP_588612 Length = 251 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSELSKRNN 9 + ELS RNN Sbjct: 38 MEELSLRNN 46>XP_006717563 Length = 466 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LSELSKRNN 9 LSE + RNN Sbjct: 298 LSEAANRNN 306>XP_005262928 Length = 965 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSELSKRNN 9 L E+S++NN Sbjct: 486 LPEISRKNN 494>XP_005262927 Length = 1526 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSELSKRNN 9 L E+S++NN Sbjct: 1047 LPEISRKNN 1055>XP_005262926 Length = 1609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSELSKRNN 9 L E+S++NN Sbjct: 1131 LPEISRKNN 1139>NP_001231118 Length = 1644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 409 ELSKREN 415>NP_001231121 Length = 1504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 312 ELSKREN 318>NP_055564 Length = 1472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>NP_001231119 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 341 ELSKREN 347>NP_001231120 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 271 ELSKREN 277>NP_001231122 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 216 ELSKREN 222>NP_079082 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSELSKRN 8 L+ELSKR+ Sbjct: 496 LNELSKRH 503>NP_851825 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 289 SRLSKRNS 296>NP_001229347 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 362 SRLSKRNS 369>NP_001229346 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 381 SRLSKRNS 388>NP_001229345 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 289 SRLSKRNS 296>NP_653175 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 350 SRLSKRNS 357>NP_851808 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 350 SRLSKRNS 357>XP_006720406 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720405 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720404 Length = 1477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720403 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720402 Length = 1487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720401 Length = 1504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720400 Length = 1526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720399 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ELSKRNN 9 ELSKR N Sbjct: 356 ELSKREN 362>XP_006720376 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 93 SRLSKRNS 100>XP_006720375 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 93 SRLSKRNS 100>XP_006720374 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 177 SRLSKRNS 184>XP_006720373 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 177 SRLSKRNS 184>XP_006720372 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 177 SRLSKRNS 184>XP_006720371 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 289 SRLSKRNS 296>XP_006720370 Length = 584 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 350 SRLSKRNS 357>XP_006720369 Length = 591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S LSKRN+ Sbjct: 350 SRLSKRNS 357>XP_005271738 Length = 714 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSELSKRN 8 L+ELSKR+ Sbjct: 496 LNELSKRH 503>XP_006718978 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSELSKRN 8 L+ELSKR+ Sbjct: 458 LNELSKRH 465>XP_005271736 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSELSKRN 8 L+ELSKR+ Sbjct: 496 LNELSKRH 503>XP_005271737 Length = 778 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LSELSKRN 8 L+ELSKR+ Sbjct: 496 LNELSKRH 503>NP_570124 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SELSKRN 8 SE++KRN Sbjct: 219 SEIAKRN 225>NP_000634 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSELSKRN 8 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_000635 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSELSKRN 8 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_000636 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSELSKRN 8 L ELSK+N Sbjct: 1280 LLELSKKN 1287>NP_000019 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSELSKRN 8 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_000637 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSELSKRN 8 L ELSK+N Sbjct: 1281 LLELSKKN 1288>NP_000633 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSELSKRN 8 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_004085 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSELSKR 7 LSELS+R Sbjct: 48 LSELSRR 54>NP_055887 Length = 1281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SELSKRNN 9 S++SK NN Sbjct: 822 SKISKNNN 829>NP_694962 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSELSKRNN 9 LS LSK NN Sbjct: 116 LSCLSKSNN 124>NP_073613 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LSELSKRNN 9 L LSKR N Sbjct: 203 LQSLSKRTN 211>NP_001157918 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SELSKRNN 9 +ELS+R+N Sbjct: 927 TELSRRHN 934>XP_006715913 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 SELSKRN 8 SE++KRN Sbjct: 11 SEIAKRN 17>XP_005270614 Length = 1532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSELSKRN 8 L ELSK+N Sbjct: 1297 LLELSKKN 1304>NP_060918 Length = 1230 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSELSKRNN 9 LSELSK ++ Sbjct: 219 LSELSKNDS 227Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.114 0.265 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 422,482 Number of extensions: 563 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |