Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 18 1482 XP_006713721 18 1482 XP_005249373 17 3301 NP_847894 15 9605 NP_060888 15 9605 NP_001268232 15 9605 NP_006406 15 9605 NP_001035518 15 9605 NP_892006 15 9605 NP_149062 15 9605 NP_057358 15 9605 NP_001273047 15 9605 NP_001273048 15 9605 NP_004271 15 9605 NP_004454 15 9605 NP_060697 15 9605 XP_005267912 15 9605 XP_005267911 15 9605 XP_005267909 15 9605 XP_005267908 15 9605 XP_005274213 15 9605 XP_005274211 15 9605 XP_006715488 15 9605 XP_006715487 15 9605 XP_006715486 15 9605 XP_006715485 15 9605 XP_006715484 15 9605 XP_006715483 15 9605 XP_006715482 15 9605 XP_006715481 15 9605 XP_006715480 15 9605 XP_006715479 15 9605 XP_006715478 15 9605 XP_006715477 15 9605 XP_006715476 15 9605 XP_006715475 15 9605 XP_006715474 15 9605 XP_006715473 15 9605 XP_006715472 15 9605 XP_006715471 15 9605 XP_006715470 15 9605 XP_006714316 15 9605>NP_006209 Length = 1068 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSEITVQEK 9 LSEIT QEK Sbjct: 540 LSEITEQEK 548>XP_006713721 Length = 1068 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSEITVQEK 9 LSEIT QEK Sbjct: 540 LSEITEQEK 548>XP_005249373 Length = 7723 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SEITVQEK 9 SEIT QEK Sbjct: 166 SEITFQEK 173>NP_847894 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 S++TV+EK Sbjct: 50 SDLTVKEK 57>NP_060888 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 SE+T+Q++ Sbjct: 456 SEVTIQQE 463>NP_001268232 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 S++TV+EK Sbjct: 50 SDLTVKEK 57>NP_006406 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 S++TV+EK Sbjct: 50 SDLTVKEK 57>NP_001035518 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 SE+T+Q++ Sbjct: 424 SEVTIQQE 431>NP_892006 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4521 MKEVTEQEK 4529>NP_149062 Length = 8749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4450 MKEVTEQEK 4458>NP_057358 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSEITVQE 8 L E+TV+E Sbjct: 139 LDEVTVEE 146>NP_001273047 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEITVQE 8 L EITVQ+ Sbjct: 9 LMEITVQQ 16>NP_001273048 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEITVQE 8 L EITVQ+ Sbjct: 9 LMEITVQQ 16>NP_004271 Length = 174 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EITVQEK 9 ++TVQEK Sbjct: 130 DLTVQEK 136>NP_004454 Length = 961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EITVQEK 9 E+TVQ+K Sbjct: 367 ELTVQQK 373>NP_060697 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSEITVQE 8 LSE+ +QE Sbjct: 787 LSEVKIQE 794>XP_005267912 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 SE+T+Q++ Sbjct: 393 SEVTIQQE 400>XP_005267911 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 SE+T+Q++ Sbjct: 393 SEVTIQQE 400>XP_005267909 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 SE+T+Q++ Sbjct: 425 SEVTIQQE 432>XP_005267908 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 SEITVQEK 9 SE+T+Q++ Sbjct: 457 SEVTIQQE 464>XP_005274213 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEITVQE 8 L EITVQ+ Sbjct: 9 LMEITVQQ 16>XP_005274211 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEITVQE 8 L EITVQ+ Sbjct: 9 LMEITVQQ 16>XP_006715488 Length = 8721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715487 Length = 8744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715486 Length = 8758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715485 Length = 8793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4475 MKEVTEQEK 4483>XP_006715484 Length = 8794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4476 MKEVTEQEK 4484>XP_006715483 Length = 8795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715482 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4521 MKEVTEQEK 4529>XP_006715481 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4481 MKEVTEQEK 4489>XP_006715480 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715479 Length = 8804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715478 Length = 8809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715477 Length = 8822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4504 MKEVTEQEK 4512>XP_006715476 Length = 8823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715475 Length = 8827 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715474 Length = 8829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4511 MKEVTEQEK 4519>XP_006715473 Length = 8832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715472 Length = 8839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4521 MKEVTEQEK 4529>XP_006715471 Length = 8842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715470 Length = 8846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITVQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006714316 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSEITVQE 8 LSE+ +QE Sbjct: 712 LSEVKIQE 719Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.117 0.257 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 468,722 Number of extensions: 847 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |