Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 18 1482 XP_006713721 18 1482 NP_115970 16 5631 NP_064627 16 5631 NP_006416 16 5631 NP_001139806 16 5631 XP_006724421 16 5631 XP_006715862 16 5631 XP_006715737 16 5631 XP_005249373 16 5631 XP_005265850 16 5631 XP_006713328 16 5631 XP_006713327 16 5631 XP_006713326 16 5631 XP_006713325 16 5631 XP_006713324 16 5631 XP_005265385 16 5631 NP_115921 16 7355 NP_115590 16 7355 NP_778252 16 7355 NP_001988 16 7355 XP_005260629 16 7355 XP_005267222 16 7355 NP_000029 15 9605 NP_001120983 15 9605 NP_001120982 15 9605 NP_003256 15 9605 NP_892006 15 9605 NP_149062 15 9605 NP_071361 15 9605 NP_060681 15 9605 XP_006715488 15 9605 XP_006715487 15 9605 XP_006715486 15 9605 XP_006715485 15 9605 XP_006715484 15 9605 XP_006715483 15 9605 XP_006715482 15 9605 XP_006715481 15 9605 XP_006715480 15 9605 XP_006715479 15 9605 XP_006715478 15 9605 XP_006715477 15 9605 XP_006715476 15 9605 XP_006715475 15 9605 XP_006715474 15 9605 XP_006715473 15 9605 XP_006715472 15 9605 XP_006715471 15 9605 XP_006715470 15 9605 XP_006714357 15 9605 XP_006710801 15 9605 NP_055040 15 9605>NP_006209 Length = 1068 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSEITGQEK 9 LSEIT QEK Sbjct: 540 LSEITEQEK 548>XP_006713721 Length = 1068 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSEITGQEK 9 LSEIT QEK Sbjct: 540 LSEITEQEK 548>NP_115970 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEITGQEK 9 +E+TGQE+ Sbjct: 333 TELTGQEE 340>NP_064627 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+G EK Sbjct: 552 SEISGMEK 559>NP_006416 Length = 586 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSEITGQE 8 ++EITG+E Sbjct: 471 INEITGEE 478>NP_001139806 Length = 1562 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEITGQE 8 +SEI GQE Sbjct: 532 ISEILGQE 539>XP_006724421 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EITGQEK 9 E+TG+EK Sbjct: 651 EVTGKEK 657>XP_006715862 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEITGQEK 9 +E+TGQE+ Sbjct: 158 TELTGQEE 165>XP_006715737 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEITGQE 8 +SEI GQE Sbjct: 532 ISEILGQE 539>XP_005249373 Length = 7723 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEIT QEK Sbjct: 166 SEITFQEK 173>XP_005265850 Length = 596 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSEITGQE 8 ++EITG+E Sbjct: 481 INEITGEE 488>XP_006713328 Length = 992 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+G EK Sbjct: 552 SEISGMEK 559>XP_006713327 Length = 1023 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+G EK Sbjct: 187 SEISGMEK 194>XP_006713326 Length = 1037 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+G EK Sbjct: 552 SEISGMEK 559>XP_006713325 Length = 1195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+G EK Sbjct: 552 SEISGMEK 559>XP_006713324 Length = 1285 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+G EK Sbjct: 552 SEISGMEK 559>XP_005265385 Length = 1291 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+G EK Sbjct: 455 SEISGMEK 462>NP_115921 Length = 1894 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEITGQEK 9 +EITG+E+ Sbjct: 538 TEITGEEE 545>NP_115590 Length = 261 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSEITGQE 8 LSE++G+E Sbjct: 72 LSEVSGRE 79>NP_778252 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSEITGQE 8 LSE++G+E Sbjct: 72 LSEVSGRE 79>NP_001988 Length = 133 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EITGQE 8 E+TGQE Sbjct: 14 EVTGQE 19>XP_005260629 Length = 214 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LSEITGQE 8 LSE++G+E Sbjct: 72 LSEVSGRE 79>XP_005267222 Length = 1819 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SEITGQEK 9 +EITG+E+ Sbjct: 463 TEITGEEE 470>NP_000029 Length = 2843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+GQ K Sbjct: 2207 SEISGQMK 2214>NP_001120983 Length = 2825 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+GQ K Sbjct: 2189 SEISGQMK 2196>NP_001120982 Length = 2843 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEITGQEK 9 SEI+GQ K Sbjct: 2207 SEISGQMK 2214>NP_003256 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EITGQE 8 E+TGQE Sbjct: 446 ELTGQE 451>NP_892006 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4521 MKEVTEQEK 4529>NP_149062 Length = 8749 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4450 MKEVTEQEK 4458>NP_071361 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 EITGQEK 9 ++TGQE+ Sbjct: 309 DVTGQER 315>NP_060681 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SEITGQEK 9 SE+TG K Sbjct: 176 SEVTGHSK 183>XP_006715488 Length = 8721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715487 Length = 8744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715486 Length = 8758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715485 Length = 8793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4475 MKEVTEQEK 4483>XP_006715484 Length = 8794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4476 MKEVTEQEK 4484>XP_006715483 Length = 8795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715482 Length = 8797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4521 MKEVTEQEK 4529>XP_006715481 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4481 MKEVTEQEK 4489>XP_006715480 Length = 8799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715479 Length = 8804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715478 Length = 8809 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715477 Length = 8822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4504 MKEVTEQEK 4512>XP_006715476 Length = 8823 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715475 Length = 8827 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715474 Length = 8829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4511 MKEVTEQEK 4519>XP_006715473 Length = 8832 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715472 Length = 8839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4521 MKEVTEQEK 4529>XP_006715471 Length = 8842 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006715470 Length = 8846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEITGQEK 9 + E+T QEK Sbjct: 4528 MKEVTEQEK 4536>XP_006714357 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EITGQE 8 E+TGQE Sbjct: 446 ELTGQE 451>XP_006710801 Length = 647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SEITGQEK 9 SE+TG K Sbjct: 132 SEVTGHSK 139>NP_055040 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSEITGQE 8 LSE+ GQ+ Sbjct: 508 LSEVCGQD 515Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.119 0.282 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 593,500 Number of extensions: 908 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |