Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 21 229 XP_006716142 21 229 XP_005250088 21 229 XP_006716141 21 229 XP_005250085 21 229 XP_006716140 21 229 XP_005250084 21 229 XP_005250083 21 229 XP_005250082 21 229 NP_056121 17 3301 XP_005270747 17 3301 XP_006710574 17 3301 XP_005270746 17 3301 NP_060115 16 5631 NP_001257819 16 5631 NP_001070993 16 5631 NP_001268663 16 5631 NP_001121646 16 5631 NP_067083 16 5631 NP_071930 16 5631 XP_006714366 16 5631 XP_006714365 16 5631 XP_005265457 16 5631 NP_001070994 16 5631 NP_003351 16 5631 NP_065988 16 7355 NP_058633 16 7355 NP_659444 16 7355 NP_061141 16 7355 XP_005274609 16 7355 XP_005258690 16 7355 XP_005258689 16 7355 XP_005257087 16 7355 XP_005257086 16 7355 XP_005267986 16 7355 XP_005252782 16 7355 XP_006718182 16 7355 NP_694941 16 7355 NP_001034764 16 7355 NP_000575 15 9605 NP_004919 15 9605 NP_001258369 15 9605 NP_001258371 15 9605 NP_001258370 15 9605 NP_071942 15 9605 NP_001265536 15 9605 NP_660288 15 9605 NP_001265537 15 9605 NP_001265535 15 9605 NP_001186 15 9605 NP_001153416 15 9605 XP_006724116 15 9605 XP_006724115 15 9605 XP_006724114 15 9605 XP_005272515 15 9605 XP_006713361 15 9605 NP_001135977 15 9605 NP_071452 15 9605 NP_001155177 15 9605>NP_733751 Length = 4911 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 862 ISEGREIFK 870>XP_006716142 Length = 4927 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 863 ISEGREIFK 871>XP_005250088 Length = 4928 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 863 ISEGREIFK 871>XP_006716141 Length = 4959 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 863 ISEGREIFK 871>XP_005250085 Length = 4979 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 863 ISEGREIFK 871>XP_006716140 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 863 ISEGREIFK 871>XP_005250084 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 863 ISEGREIFK 871>XP_005250083 Length = 4982 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 862 ISEGREIFK 870>XP_005250082 Length = 4983 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LSEGREIFK 9 +SEGREIFK Sbjct: 863 ISEGREIFK 871>NP_056121 Length = 2620 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEGREIFK 9 SEGRE+ K Sbjct: 2216 SEGRELIK 2223>XP_005270747 Length = 2025 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEGREIFK 9 SEGRE+ K Sbjct: 1621 SEGRELIK 1628>XP_006710574 Length = 2445 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEGREIFK 9 SEGRE+ K Sbjct: 2041 SEGRELIK 2048>XP_005270746 Length = 2443 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SEGREIFK 9 SEGRE+ K Sbjct: 2041 SEGRELIK 2048>NP_060115 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 LSEG+EI Sbjct: 555 LSEGKEI 561>NP_001257819 Length = 920 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 LSEG+EI Sbjct: 520 LSEGKEI 526>NP_001070993 Length = 650 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEGREIF 8 LS+G EIF Sbjct: 383 LSKGEEIF 390>NP_001268663 Length = 763 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GREIFK 9 GRE+FK Sbjct: 204 GREVFK 209>NP_001121646 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 LSEGR+I Sbjct: 56 LSEGRDI 62>NP_067083 Length = 777 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 GREIFK 9 GRE+FK Sbjct: 204 GREVFK 209>NP_071930 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEGREIF 8 LS+G EIF Sbjct: 383 LSKGEEIF 390>XP_006714366 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 LSEGR+I Sbjct: 56 LSEGRDI 62>XP_006714365 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 LSEGR+I Sbjct: 56 LSEGRDI 62>XP_005265457 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEGREIF 8 LS+G EIF Sbjct: 358 LSKGEEIF 365>NP_001070994 Length = 598 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSEGREIF 8 LS+G EIF Sbjct: 383 LSKGEEIF 390>NP_003351 Length = 541 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 LSEGR+I Sbjct: 56 LSEGRDI 62>NP_065988 Length = 2048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSEGRE 6 LSEGRE Sbjct: 589 LSEGRE 594>NP_058633 Length = 1462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSEGREIF 8 + +GREIF Sbjct: 88 VEDGREIF 95>NP_659444 Length = 1033 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGREI Sbjct: 985 LKEGREI 991>NP_061141 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EGREIFK 9 EG E+FK Sbjct: 27 EGNELFK 33>XP_005274609 Length = 1468 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSEGREIF 8 + +GREIF Sbjct: 94 VEDGREIF 101>XP_005258690 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGREI Sbjct: 468 LKEGREI 474>XP_005258689 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGREI Sbjct: 886 LKEGREI 892>XP_005257087 Length = 957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SEGREIFK 9 SEG +FK Sbjct: 664 SEGHHVFK 671>XP_005257086 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SEGREIFK 9 SEG +FK Sbjct: 706 SEGHHVFK 713>XP_005267986 Length = 2022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 LSEGRE 6 LSEGRE Sbjct: 563 LSEGRE 568>XP_005252782 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EGREIF 8 EGRE+F Sbjct: 273 EGRELF 278>XP_006718182 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EGREIF 8 EGRE+F Sbjct: 273 EGRELF 278>NP_694941 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SEGREIFK 9 SEG +FK Sbjct: 705 SEGHHVFK 712>NP_001034764 Length = 929 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EGREIFK 9 EG E+FK Sbjct: 12 EGNELFK 18>NP_000575 Length = 99 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 LS+GRE+ Sbjct: 70 LSDGREL 76>NP_004919 Length = 256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 LSEG EI Sbjct: 135 LSEGEEI 141>NP_001258369 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 LSEG EI Sbjct: 135 LSEGEEI 141>NP_001258371 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 LSEG EI Sbjct: 94 LSEGEEI 100>NP_001258370 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 LSEG EI Sbjct: 135 LSEGEEI 141>NP_071942 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEGREIFK 9 LS+G +FK Sbjct: 16 LSQGNVVFK 24>NP_001265536 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGRE+ Sbjct: 114 LEEGREV 120>NP_660288 Length = 794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 L+EGRE+ Sbjct: 573 LAEGREL 579>NP_001265537 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGRE+ Sbjct: 86 LEEGREV 92>NP_001265535 Length = 526 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGRE+ Sbjct: 86 LEEGREV 92>NP_001186 Length = 665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGRE+ Sbjct: 225 LEEGREV 231>NP_001153416 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 L+EGRE+ Sbjct: 584 LAEGREL 590>XP_006724116 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 LSEG EI Sbjct: 27 LSEGEEI 33>XP_006724115 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 LSEG EI Sbjct: 160 LSEGEEI 166>XP_006724114 Length = 281 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 LSEG EI Sbjct: 160 LSEGEEI 166>XP_005272515 Length = 805 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LSEGREI 7 L+EGRE+ Sbjct: 584 LAEGREL 590>XP_006713361 Length = 112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSEGREIFK 9 LS+G +FK Sbjct: 16 LSQGNVVFK 24>NP_001135977 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSEGREIFK 9 LS+G+ IFK Sbjct: 274 LSQGQCIFK 282>NP_071452 Length = 646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSEGREIFK 9 LS+G+ IFK Sbjct: 274 LSQGQCIFK 282>NP_001155177 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 LSEGREI 7 L EGRE+ Sbjct: 100 LEEGREV 106Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.143 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 611,007 Number of extensions: 1132 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |