Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1135 XP_006716142 18 1135 XP_005250088 18 1135 XP_006716141 18 1135 XP_005250085 18 1135 XP_006716140 18 1135 XP_005250084 18 1135 XP_005250083 18 1135 XP_005250082 18 1135 NP_003473 17 4312 XP_006719679 17 4312 XP_005269219 17 4312 XP_006719678 17 4312 XP_006719677 17 4312 NP_937825 16 5631 NP_008913 16 5631 NP_079191 16 5631 NP_872393 16 5631 XP_005269222 16 5631 XP_006712515 16 5631 XP_006712513 16 5631 XP_006712512 16 5631 XP_006712511 16 5631 XP_006712510 16 5631 XP_006712509 16 5631 XP_005246533 16 5631 XP_006712508 16 5631 XP_005246216 16 5631 XP_006711947 16 5631 XP_005246215 16 5631 XP_006711946 16 5631 XP_006711945 16 5631 NP_115893 16 5631 NP_001138679 16 7355 NP_671725 16 7355 NP_757379 16 7355 NP_001171922 16 7355 NP_001274730 16 7355 XP_006719916 16 7355 XP_006719915 16 7355 XP_006719914 16 7355 XP_005266530 16 7355 XP_006719913 16 7355 XP_006719912 16 7355 XP_006719911 16 7355 XP_006719910 16 7355 XP_006719909 16 7355 XP_006710418 16 7355 NP_112567 16 7355 NP_000526 15 9605 NP_665698 15 9605 NP_620689 15 9605 NP_612504 15 9605 NP_065776 15 9605 XP_006715966 15 9605 XP_005250277 15 9605 XP_006715965 15 9605 XP_005250276 15 9605 XP_006715964 15 9605 XP_006715963 15 9605 XP_006715806 15 9605 XP_006715805 15 9605 XP_006713075 15 9605 XP_005264983 15 9605 XP_005264981 15 9605 XP_005264980 15 9605 XP_006713074 15 9605 XP_005264979 15 9605 XP_005264978 15 9605 XP_006711326 15 9605 XP_005273145 15 9605 XP_006711325 15 9605>NP_733751 Length = 4911 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3212 LSAKQRTAK 3220>XP_006716142 Length = 4927 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3229 LSAKQRTAK 3237>XP_005250088 Length = 4928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3229 LSAKQRTAK 3237>XP_006716141 Length = 4959 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3229 LSAKQRTAK 3237>XP_005250085 Length = 4979 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3229 LSAKQRTAK 3237>XP_006716140 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3229 LSAKQRTAK 3237>XP_005250084 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3229 LSAKQRTAK 3237>XP_005250083 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3228 LSAKQRTAK 3236>XP_005250082 Length = 4983 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 LSAKQ TAK Sbjct: 3229 LSAKQRTAK 3237>NP_003473 Length = 5537 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L AKQ TAK Sbjct: 3542 LCAKQRTAK 3550>XP_006719679 Length = 5536 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L AKQ TAK Sbjct: 3541 LCAKQRTAK 3549>XP_005269219 Length = 5537 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L AKQ TAK Sbjct: 3542 LCAKQRTAK 3550>XP_006719678 Length = 5539 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L AKQ TAK Sbjct: 3544 LCAKQRTAK 3552>XP_006719677 Length = 5540 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L AKQ TAK Sbjct: 3545 LCAKQRTAK 3553>NP_937825 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKQHTAK 9 ++QHTAK Sbjct: 326 SRQHTAK 332>NP_008913 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 + AK+HTA Sbjct: 313 MKAKEHTA 320>NP_079191 Length = 625 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKQHTAK 9 ++QHTAK Sbjct: 322 SRQHTAK 328>NP_872393 Length = 3234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2865 LSARQHIA 2872>XP_005269222 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 + AK+HTA Sbjct: 313 MKAKEHTA 320>XP_006712515 Length = 3232 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2863 LSARQHIA 2870>XP_006712513 Length = 3220 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2832 LSARQHIA 2839>XP_006712512 Length = 3237 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2868 LSARQHIA 2875>XP_006712511 Length = 3256 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2868 LSARQHIA 2875>XP_006712510 Length = 3305 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2936 LSARQHIA 2943>XP_006712509 Length = 3319 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2931 LSARQHIA 2938>XP_005246533 Length = 3323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2935 LSARQHIA 2942>XP_006712508 Length = 3324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2936 LSARQHIA 2943>XP_005246216 Length = 429 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKQHTAK 9 ++QHTAK Sbjct: 137 SRQHTAK 143>XP_006711947 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKQHTAK 9 ++QHTAK Sbjct: 137 SRQHTAK 143>XP_005246215 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKQHTAK 9 ++QHTAK Sbjct: 175 SRQHTAK 181>XP_006711946 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKQHTAK 9 ++QHTAK Sbjct: 326 SRQHTAK 332>XP_006711945 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AKQHTAK 9 ++QHTAK Sbjct: 326 SRQHTAK 332>NP_115893 Length = 3258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 LSA+QH A Sbjct: 2870 LSARQHIA 2877>NP_001138679 Length = 632 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 SAK HT K Sbjct: 355 SAKNHTFK 362>NP_671725 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LSAKQHTA 8 L AKQH A Sbjct: 366 LRAKQHAA 373>NP_757379 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LSAKQHTA 8 L AKQH A Sbjct: 361 LRAKQHAA 368>NP_001171922 Length = 1619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 541 SAKQHIA 547>NP_001274730 Length = 578 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LSAKQHTA 8 +SAK HT+ Sbjct: 257 ISAKDHTS 264>XP_006719916 Length = 1482 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 400 SAKQHIA 406>XP_006719915 Length = 1531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 400 SAKQHIA 406>XP_006719914 Length = 1639 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 561 SAKQHIA 567>XP_005266530 Length = 1643 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719913 Length = 1650 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719912 Length = 1672 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 541 SAKQHIA 547>XP_006719911 Length = 1688 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719910 Length = 1692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006719909 Length = 1692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 561 SAKQHIA 567>XP_006710418 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LSAKQHTA 8 L AKQH A Sbjct: 361 LRAKQHAA 368>NP_112567 Length = 1623 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 SAKQHTA 8 SAKQH A Sbjct: 541 SAKQHIA 547>NP_000526 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L+ K HT+K Sbjct: 83 LTLKHHTSK 91>NP_665698 Length = 1320 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>NP_620689 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L AK+H A+ Sbjct: 537 LKAKEHAAQ 545>NP_612504 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 52 SSKQHT 57>NP_065776 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715966 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 176 SSKQHT 181>XP_005250277 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715965 Length = 872 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 176 SSKQHT 181>XP_005250276 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715964 Length = 964 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715963 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SAKQHT 7 S+KQHT Sbjct: 176 SSKQHT 181>XP_006715806 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L+ K HT+K Sbjct: 83 LTLKHHTSK 91>XP_006715805 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSAKQHTAK 9 L+ K HT+K Sbjct: 81 LTLKHHTSK 89>XP_006713075 Length = 1019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>XP_005264983 Length = 1209 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>XP_005264981 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>XP_005264980 Length = 1313 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>XP_006713074 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>XP_005264979 Length = 1322 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>XP_005264978 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 SAKQHTAK 9 S K HTAK Sbjct: 157 SDKPHTAK 164>XP_006711326 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 +SAK+ TAK Sbjct: 344 ISAKKGTAK 352>XP_005273145 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 +SAK+ TAK Sbjct: 344 ISAKKGTAK 352>XP_006711325 Length = 864 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSAKQHTAK 9 +SAK+ TAK Sbjct: 344 ISAKKGTAK 352Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.104 0.260 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 522,815 Number of extensions: 379 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |