Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 18 1935 XP_005265800 18 1935 XP_006714103 18 1935 XP_006714102 18 1935 NP_068587 17 4312 NP_036312 16 5631 NP_776175 16 7355 NP_079083 16 7355 XP_006726603 16 7355 XP_006725215 16 7355 XP_005254368 16 7355 XP_005254367 16 7355 XP_006720536 16 7355 XP_006719239 16 7355 XP_006719237 16 7355 NP_005069 15 9605 NP_065959 15 9605 NP_001269910 15 9605 NP_001269909 15 9605 NP_001098662 15 9605 NP_001269908 15 9605 NP_001269911 15 9605 NP_004148 15 9605 NP_001264661 15 9605 NP_003725 15 9605 XP_006726806 15 9605 XP_006722322 15 9605 XP_005254690 15 9605 XP_006720728 15 9605 XP_006720727 15 9605 XP_005254679 15 9605 XP_005254685 15 9605 XP_006720726 15 9605 XP_005254682 15 9605 XP_006720725 15 9605 XP_005254680 15 9605 XP_005265372 15 9605 XP_005265370 15 9605 XP_006710095 15 9605>NP_006197 Length = 1089 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSADSVYII 9 LSADS YII Sbjct: 1012 LSADSGYII 1020>XP_005265800 Length = 1089 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSADSVYII 9 LSADS YII Sbjct: 1012 LSADSGYII 1020>XP_006714103 Length = 1111 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSADSVYII 9 LSADS YII Sbjct: 1034 LSADSGYII 1042>XP_006714102 Length = 1114 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LSADSVYII 9 LSADS YII Sbjct: 1037 LSADSGYII 1045>NP_068587 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LSADSVYII 9 LS+D VYI+ Sbjct: 408 LSSDLVYIV 416>NP_036312 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LSADSVYII 9 LS D+VY++ Sbjct: 255 LSPDAVYVL 263>NP_776175 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 L DSVY++ Sbjct: 581 LKPDSVYLV 589>NP_079083 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 SADSVY 7 SADSVY Sbjct: 21 SADSVY 26>XP_006726603 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSADSVY 7 LSA+SVY Sbjct: 416 LSAESVY 422>XP_006725215 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSADSVY 7 LSA+SVY Sbjct: 416 LSAESVY 422>XP_005254368 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 L DSVY++ Sbjct: 581 LKPDSVYLV 589>XP_005254367 Length = 1031 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 L DSVY++ Sbjct: 462 LKPDSVYLV 470>XP_006720536 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 L DSVY++ Sbjct: 503 LKPDSVYLV 511>XP_006719239 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSADSVY 7 LSA+SVY Sbjct: 631 LSAESVY 637>XP_006719237 Length = 1263 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 LSADSVY 7 LSA+SVY Sbjct: 416 LSAESVY 422>NP_005069 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 749 ISADDKYIV 757>NP_065959 Length = 760 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 737 ISADDKYIV 745>NP_001269910 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 739 ISADDKYIV 747>NP_001269909 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 744 ISADDKYIV 752>NP_001098662 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 746 ISADDKYIV 754>NP_001269908 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 741 ISADDKYIV 749>NP_001269911 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 676 ISADDKYIV 684>NP_004148 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ADSVYII 9 ADS YII Sbjct: 295 ADSFYII 301>NP_001264661 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SADSVY 7 SADS+Y Sbjct: 176 SADSIY 181>NP_003725 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SADSVY 7 SADS+Y Sbjct: 719 SADSIY 724>XP_006726806 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SADSVY 7 SADS+Y Sbjct: 215 SADSIY 220>XP_006722322 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SADSVY 7 SADS+Y Sbjct: 215 SADSIY 220>XP_005254690 Length = 755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 732 ISADDKYIV 740>XP_006720728 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 740 ISADDKYIV 748>XP_006720727 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 746 ISADDKYIV 754>XP_005254679 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 756 ISADDKYIV 764>XP_005254685 Length = 765 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 742 ISADDKYIV 750>XP_006720726 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 745 ISADDKYIV 753>XP_005254682 Length = 770 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 747 ISADDKYIV 755>XP_006720725 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 751 ISADDKYIV 759>XP_005254680 Length = 774 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LSADSVYII 9 +SAD YI+ Sbjct: 751 ISADDKYIV 759>XP_005265372 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ADSVYII 9 ADS YII Sbjct: 295 ADSFYII 301>XP_005265370 Length = 404 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ADSVYII 9 ADS YII Sbjct: 295 ADSFYII 301>XP_006710095 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 SADSVY 7 SADS+Y Sbjct: 215 SADSIY 220Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.138 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 394,999 Number of extensions: 617 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |