Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_940953 18 1482 XP_005273179 18 1482 XP_006711367 18 1482 XP_005273178 18 1482 NP_005698 16 5631 NP_005605 16 5631 XP_006716144 16 5631 XP_005244985 16 5631 NP_057526 16 7355 NP_001185470 16 7355 NP_001035548 16 7355 NP_075044 16 7355 NP_060484 16 7355 NP_612569 16 7355 NP_899631 16 7355 NP_899630 16 7355 NP_003707 16 7355 NP_002957 16 7355 XP_005272073 16 7355 XP_005272072 16 7355 XP_006713441 16 7355 XP_006713440 16 7355 XP_006713439 16 7355 XP_006713438 16 7355 XP_006713437 16 7355 XP_006713436 16 7355 XP_006713435 16 7355 XP_006713434 16 7355 XP_006713433 16 7355 XP_006713432 16 7355 XP_006713431 16 7355 XP_006713430 16 7355 XP_006713429 16 7355 XP_006713428 16 7355 XP_006713427 16 7355 XP_006713426 16 7355 XP_006713425 16 7355 NP_001252 15 9605 NP_055524 15 9605 NP_065825 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 L+VLLESEK Sbjct: 3298 LQVLLESEK 3306>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 L+VLLESEK Sbjct: 3290 LQVLLESEK 3298>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 L+VLLESEK Sbjct: 3251 LQVLLESEK 3259>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 L+VLLESEK Sbjct: 3330 LQVLLESEK 3338>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 L+VLLESEK Sbjct: 3343 LQVLLESEK 3351>NP_940953 Length = 1907 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 LRV+LESE+ Sbjct: 1286 LRVMLESER 1294>XP_005273179 Length = 785 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 LRV+LESE+ Sbjct: 164 LRVMLESER 172>XP_006711367 Length = 1872 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 LRV+LESE+ Sbjct: 1286 LRVMLESER 1294>XP_005273178 Length = 1931 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 LRVLLESEK 9 LRV+LESE+ Sbjct: 1286 LRVMLESER 1294>NP_005698 Length = 485 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRVLLESEK 9 LRV+LE E+ Sbjct: 373 LRVMLEGEQ 381>NP_005605 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVLLESEK 9 R++LE+EK Sbjct: 162 RIILEAEK 169>XP_006716144 Length = 173 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVLLESEK 9 R++LE+EK Sbjct: 151 RIILEAEK 158>XP_005244985 Length = 481 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLLESEK 9 +LLESEK Sbjct: 438 ILLESEK 444>NP_057526 Length = 948 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRVLLESEK 9 +RV L+SEK Sbjct: 929 IRVWLQSEK 937>NP_001185470 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRVLLESEK 9 +RV L+SEK Sbjct: 929 IRVWLQSEK 937>NP_001035548 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRVLLESEK 9 +RV L+SEK Sbjct: 929 IRVWLQSEK 937>NP_075044 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRVLLESE 8 LR+ LESE Sbjct: 195 LRIYLESE 202>NP_060484 Length = 773 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRVLLESE 8 LR+ LESE Sbjct: 195 LRIYLESE 202>NP_612569 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRVLLESE 8 LR+ LESE Sbjct: 195 LRIYLESE 202>NP_899631 Length = 1314 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 786 LRVLLENQ 793>NP_899630 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 769 LRVLLENQ 776>NP_003707 Length = 1353 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 786 LRVLLENQ 793>NP_002957 Length = 97 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRVLLESE 8 LRVL+E E Sbjct: 31 LRVLMEKE 38>XP_005272073 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRVLLESEK 9 +RV L+SEK Sbjct: 929 IRVWLQSEK 937>XP_005272072 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRVLLESEK 9 +RV L+SEK Sbjct: 929 IRVWLQSEK 937>XP_006713441 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713440 Length = 1127 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 616 LRVLLENQ 623>XP_006713439 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713438 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713437 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713436 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713435 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713434 Length = 1180 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713433 Length = 1183 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713432 Length = 1184 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713431 Length = 1190 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713430 Length = 1197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713429 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713428 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713427 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713426 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>XP_006713425 Length = 1213 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRVLLESE 8 LRVLLE++ Sbjct: 620 LRVLLENQ 627>NP_001252 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVLLESEK 9 +VL+E+EK Sbjct: 49 KVLMENEK 56>NP_055524 Length = 3546 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RVLLESEK 9 R+LLES++ Sbjct: 2950 RILLESDE 2957>NP_065825 Length = 1006 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RVLLESEK 9 RVLLES + Sbjct: 134 RVLLESRR 141Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.135 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 427,164 Number of extensions: 638 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |