Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004963                                                              20     390
XP_005251512                                                           20     390
NP_001128302                                                           17    2528
NP_060121                                                              17    2528
NP_001128303                                                           17    2528
NP_001128304                                                           17    2528
XP_005267096                                                           17    2528
XP_006715570                                                           17    2528
NP_065974                                                              16    5631
NP_001272478                                                           16    5631
XP_006712720                                                           16    5631
XP_006712719                                                           16    5631
XP_005246770                                                           16    5631
XP_005246768                                                           16    5631
XP_005246769                                                           16    5631
NP_001177369                                                           16    7355
NP_006302                                                              16    7355
NP_001177367                                                           16    7355
XP_006721668                                                           16    7355
XP_005256932                                                           16    7355
XP_006721667                                                           16    7355
XP_005256931                                                           16    7355
XP_005256930                                                           16    7355
XP_006721666                                                           16    7355
XP_005256929                                                           16    7355
XP_005256928                                                           16    7355
XP_006721665                                                           16    7355
XP_005256925                                                           16    7355
XP_005256924                                                           16    7355
XP_006721664                                                           16    7355
XP_005256923                                                           16    7355
NP_004278                                                              15    9605
NP_001012529                                                           15    9605
NP_473363                                                              15    9605
NP_001268669                                                           15    9605
NP_062536                                                              15    9605
NP_001269388                                                           15    9605
NP_079411                                                              15    9605
NP_001268668                                                           15    9605
NP_001269836                                                           15    9605
NP_001269837                                                           15    9605
NP_001269838                                                           15    9605
NP_006576                                                              15    9605
NP_005449                                                              15    9605
XP_006722614                                                           15    9605
XP_005258412                                                           15    9605
XP_005258411                                                           15    9605
XP_005258409                                                           15    9605
XP_005258408                                                           15    9605
XP_006722613                                                           15    9605
XP_005258407                                                           15    9605
XP_005258406                                                           15    9605
XP_005258405                                                           15    9605
XP_005258404                                                           15    9605
XP_005258403                                                           15    9605
XP_005257902                                                           15    9605
XP_005257901                                                           15    9605
XP_006722255                                                           15    9605
XP_006722254                                                           15    9605
XP_006722253                                                           15    9605
XP_006722252                                                           15    9605
XP_006722251                                                           15    9605
XP_005257900                                                           15    9605
XP_005252573                                                           15    9605
XP_006717532                                                           15    9605
XP_005252572                                                           15    9605
XP_005252571                                                           15    9605
XP_005252570                                                           15    9605
XP_005252569                                                           15    9605
XP_005252566                                                           15    9605
XP_006717531                                                           15    9605
XP_005252565                                                           15    9605
XP_005252564                                                           15    9605
XP_005252563                                                           15    9605
XP_005252562                                                           15    9605
XP_006717530                                                           15    9605
XP_005252561                                                           15    9605
XP_005252560                                                           15    9605
XP_005252559                                                           15    9605
XP_006717529                                                           15    9605
XP_005252558                                                           15    9605
XP_005252557                                                           15    9605
>NP_004963
          Length = 1132

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    LRVDQIRNN 9
            LRVDQIR+N
Sbjct: 1121 LRVDQIRDN 1129
>XP_005251512
          Length = 1132

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    LRVDQIRNN 9
            LRVDQIR+N
Sbjct: 1121 LRVDQIRDN 1129
>NP_001128302
          Length = 1196

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRVDQIRNN 9
           L VD+I+NN
Sbjct: 453 LSVDEIKNN 461
>NP_060121
          Length = 1196

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRVDQIRNN 9
           L VD+I+NN
Sbjct: 453 LSVDEIKNN 461
>NP_001128303
          Length = 1196

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRVDQIRNN 9
           L VD+I+NN
Sbjct: 453 LSVDEIKNN 461
>NP_001128304
          Length = 1053

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRVDQIRNN 9
           L VD+I+NN
Sbjct: 453 LSVDEIKNN 461
>XP_005267096
          Length = 1168

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRVDQIRNN 9
           L VD+I+NN
Sbjct: 453 LSVDEIKNN 461
>XP_006715570
          Length = 1179

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   LRVDQIRNN 9
           L VD+I+NN
Sbjct: 453 LSVDEIKNN 461
>NP_065974
          Length = 2354

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LRVDQIRN 8
            L+VD +RN
Sbjct: 1793 LKVDSVRN 1800
>NP_001272478
          Length = 2352

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LRVDQIRN 8
            L+VD +RN
Sbjct: 1791 LKVDSVRN 1798
>XP_006712720
          Length = 1991

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LRVDQIRN 8
            L+VD +RN
Sbjct: 1793 LKVDSVRN 1800
>XP_006712719
          Length = 2354

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LRVDQIRN 8
            L+VD +RN
Sbjct: 1793 LKVDSVRN 1800
>XP_005246770
          Length = 2354

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LRVDQIRN 8
            L+VD +RN
Sbjct: 1793 LKVDSVRN 1800
>XP_005246768
          Length = 2354

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LRVDQIRN 8
            L+VD +RN
Sbjct: 1793 LKVDSVRN 1800
>XP_005246769
          Length = 2354

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    LRVDQIRN 8
            L+VD +RN
Sbjct: 1793 LKVDSVRN 1800
>NP_001177369
          Length = 2337

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 321 KVDRIENN 328
>NP_006302
          Length = 2440

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 321 KVDRIENN 328
>NP_001177367
          Length = 914

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 212 KVDRIENN 219
>XP_006721668
          Length = 1023

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 321 KVDRIENN 328
>XP_005256932
          Length = 2448

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_006721667
          Length = 2456

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 321 KVDRIENN 328
>XP_005256931
          Length = 2466

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_005256930
          Length = 2508

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_006721666
          Length = 2511

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_005256929
          Length = 2514

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 321 KVDRIENN 328
>XP_005256928
          Length = 2515

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 321 KVDRIENN 328
>XP_006721665
          Length = 2523

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_005256925
          Length = 2523

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_005256924
          Length = 2524

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_006721664
          Length = 2524

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>XP_005256923
          Length = 2524

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   RVDQIRNN 9
           +VD+I NN
Sbjct: 330 KVDRIENN 337
>NP_004278
          Length = 212

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>NP_001012529
          Length = 195

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>NP_473363
          Length = 213

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>NP_001268669
          Length = 1622

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1266 IDQLENN 1272
>NP_062536
          Length = 1943

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1654 RTDEIRKN 1661
>NP_001269388
          Length = 328

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   LRVDQIRN 8
           L VD++RN
Sbjct: 279 LMVDRVRN 286
>NP_079411
          Length = 1439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1091 IDQLENN 1097
>NP_001268668
          Length = 1422

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1074 IDQLENN 1080
>NP_001269836
          Length = 529

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LRVDQI 6
           LRVDQI
Sbjct: 500 LRVDQI 505
>NP_001269837
          Length = 497

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LRVDQI 6
           LRVDQI
Sbjct: 468 LRVDQI 473
>NP_001269838
          Length = 475

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LRVDQI 6
           LRVDQI
Sbjct: 446 LRVDQI 451
>NP_006576
          Length = 548

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   LRVDQI 6
           LRVDQI
Sbjct: 519 LRVDQI 524
>NP_005449
          Length = 941

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1  LRVDQIRN 8
          L ++QIRN
Sbjct: 83 LAIEQIRN 90
>XP_006722614
          Length = 1589

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1241 IDQLENN 1247
>XP_005258412
          Length = 1401

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1053 IDQLENN 1059
>XP_005258411
          Length = 1409

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1053 IDQLENN 1059
>XP_005258409
          Length = 1430

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1074 IDQLENN 1080
>XP_005258408
          Length = 1447

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1091 IDQLENN 1097
>XP_006722613
          Length = 1523

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1167 IDQLENN 1173
>XP_005258407
          Length = 1533

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1266 IDQLENN 1272
>XP_005258406
          Length = 1559

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1203 IDQLENN 1209
>XP_005258405
          Length = 1597

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1241 IDQLENN 1247
>XP_005258404
          Length = 1605

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1249 IDQLENN 1255
>XP_005258403
          Length = 1614

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 6/7 (85%)

Query: 3    VDQIRNN 9
            +DQ+ NN
Sbjct: 1266 IDQLENN 1272
>XP_005257902
          Length = 147

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 50 LRVDQLK 56
>XP_005257901
          Length = 165

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>XP_006722255
          Length = 179

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>XP_006722254
          Length = 202

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>XP_006722253
          Length = 214

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>XP_006722252
          Length = 226

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>XP_006722251
          Length = 239

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 50 LRVDQLK 56
>XP_005257900
          Length = 257

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  LRVDQIR 7
          LRVDQ++
Sbjct: 68 LRVDQLK 74
>XP_005252573
          Length = 1465

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1337 RTDEIRKN 1344
>XP_006717532
          Length = 1673

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1384 RTDEIRKN 1391
>XP_005252572
          Length = 1673

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1384 RTDEIRKN 1391
>XP_005252571
          Length = 1673

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1384 RTDEIRKN 1391
>XP_005252570
          Length = 1770

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1481 RTDEIRKN 1488
>XP_005252569
          Length = 1805

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1516 RTDEIRKN 1523
>XP_005252566
          Length = 1838

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1549 RTDEIRKN 1556
>XP_006717531
          Length = 1902

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1613 RTDEIRKN 1620
>XP_005252565
          Length = 1908

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1619 RTDEIRKN 1626
>XP_005252564
          Length = 1920

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1631 RTDEIRKN 1638
>XP_005252563
          Length = 1930

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1641 RTDEIRKN 1648
>XP_005252562
          Length = 1935

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1646 RTDEIRKN 1653
>XP_006717530
          Length = 1942

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1653 RTDEIRKN 1660
>XP_005252561
          Length = 1947

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1658 RTDEIRKN 1665
>XP_005252560
          Length = 1955

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1666 RTDEIRKN 1673
>XP_005252559
          Length = 1970

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1681 RTDEIRKN 1688
>XP_006717529
          Length = 1971

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1682 RTDEIRKN 1689
>XP_005252558
          Length = 1981

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1692 RTDEIRKN 1699
>XP_005252557
          Length = 1982

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    RVDQIRNN 9
            R D+IR N
Sbjct: 1693 RTDEIRKN 1700
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.325    0.141    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 433,290
Number of extensions: 901
Number of successful extensions: 82
Number of sequences better than 10000.0: 82
Number of HSP's gapped: 82
Number of HSP's successfully gapped: 82
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package