Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 390 XP_006710239 19 869 NP_031376 18 1482 NP_891550 17 2528 XP_005265386 17 2528 NP_001269869 17 3301 NP_001034934 17 3301 XP_005246372 17 3301 NP_001121371 17 4312 NP_001269092 17 4312 NP_001121370 17 4312 NP_000075 17 4312 NP_001107604 17 4312 NP_005711 17 4312 XP_006715889 17 4312 XP_006715888 17 4312 XP_005246845 17 4312 XP_006712765 17 4312 XP_006712764 17 4312 XP_005246844 17 4312 XP_006712763 17 4312 XP_006712762 17 4312 XP_006712761 17 4312 NP_995318 16 5631 NP_001035362 16 5631 NP_892005 16 5631 NP_612501 16 5631 NP_065863 16 5631 XP_005260057 16 5631 XP_006722867 16 5631 XP_006722866 16 5631 XP_006722865 16 5631 XP_005260058 16 5631 XP_006712965 16 5631 NP_000913 15 9605 NP_055475 15 9605 NP_004144 15 9605 NP_001177748 15 9605 NP_001229769 15 9605 NP_001177747 15 9605 XP_006725395 15 9605 XP_006722056 15 9605 XP_005254346 15 9605 XP_005254347 15 9605 XP_006718312 15 9605 XP_005253029 15 9605 XP_005249968 15 9605 XP_005249967 15 9605 XP_005249966 15 9605 XP_006715864 15 9605 XP_005249965 15 9605 XP_005273163 15 9605 XP_005273162 15 9605 XP_005273160 15 9605 XP_005270390 15 9605 XP_006711823 15 9605 NP_733843 15 9605 NP_001017434 15 9605>NP_115803 Length = 1156 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRTRIAVCR 9 LR RIAVCR Sbjct: 40 LRARIAVCR 48>XP_006710239 Length = 485 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 LRTRIAVCR 9 LR+R++VCR Sbjct: 339 LRSRVSVCR 347>NP_031376 Length = 401 Score = 18.1 bits (35), Expect = 1482 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRTRIAVCR 9 +RTR+++CR Sbjct: 73 IRTRLSLCR 81>NP_891550 Length = 1935 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRTRIAVCR 9 +RTR+ VC+ Sbjct: 1402 IRTRLVVCQ 1410>XP_005265386 Length = 1907 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRTRIAVCR 9 +RTR+ VC+ Sbjct: 1374 IRTRLVVCQ 1382>NP_001269869 Length = 517 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRTRIAVCR 9 LR+R+ +CR Sbjct: 229 LRSRVPLCR 237>NP_001034934 Length = 518 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRTRIAVCR 9 LR+R+ +CR Sbjct: 229 LRSRVPLCR 237>XP_005246372 Length = 420 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRTRIAVCR 9 LR+R+ +CR Sbjct: 131 LRSRVPLCR 139>NP_001121371 Length = 816 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 +RT IA CR Sbjct: 407 IRTNIAWCR 415>NP_001269092 Length = 766 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 +RT IA CR Sbjct: 357 IRTNIAWCR 365>NP_001121370 Length = 816 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 +RT IA CR Sbjct: 407 IRTNIAWCR 415>NP_000075 Length = 746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 +RT IA CR Sbjct: 337 IRTNIAWCR 345>NP_001107604 Length = 2694 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 1233 INVRVAICR 1241>NP_005711 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RTRIAVC 8 RT+IA+C Sbjct: 20 RTQIAIC 26>XP_006715889 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RTRIAVC 8 RT+IA+C Sbjct: 20 RTQIAIC 26>XP_006715888 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RTRIAVC 8 RT+IA+C Sbjct: 20 RTQIAIC 26>XP_005246845 Length = 1624 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 150 INVRVAICR 158>XP_006712765 Length = 2679 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 1205 INVRVAICR 1213>XP_006712764 Length = 2697 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 1262 INVRVAICR 1270>XP_005246844 Length = 2707 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 1233 INVRVAICR 1241>XP_006712763 Length = 2716 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 1262 INVRVAICR 1270>XP_006712762 Length = 2723 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 1262 INVRVAICR 1270>XP_006712761 Length = 2736 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 + R+A+CR Sbjct: 1262 INVRVAICR 1270>NP_995318 Length = 177 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTRIAVCR 9 R RIA+C+ Sbjct: 53 RKRIAICQ 60>NP_001035362 Length = 1762 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTRIAVCR 9 +TR A+CR Sbjct: 809 QTRSAICR 816>NP_892005 Length = 189 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTRIAVCR 9 R RIA+C+ Sbjct: 53 RKRIAICQ 60>NP_612501 Length = 148 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTRIAVCR 9 R RIA+C+ Sbjct: 24 RKRIAICQ 31>NP_065863 Length = 2047 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 ++TRI VC Sbjct: 1885 IKTRIRVC 1892>XP_005260057 Length = 2113 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 ++TRI VC Sbjct: 1951 IKTRIRVC 1958>XP_006722867 Length = 1159 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 ++TRI VC Sbjct: 997 IKTRIRVC 1004>XP_006722866 Length = 1778 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 ++TRI VC Sbjct: 1616 IKTRIRVC 1623>XP_006722865 Length = 2078 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 ++TRI VC Sbjct: 1916 IKTRIRVC 1923>XP_005260058 Length = 2082 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 ++TRI VC Sbjct: 1920 IKTRIRVC 1927>XP_006712965 Length = 423 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRTRIAVCR 9 +RTR CR Sbjct: 46 IRTRTTACR 54>NP_000913 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 LRT ++VC Sbjct: 108 LRTLLSVC 115>NP_055475 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRTRIAVCR 9 LRT A C+ Sbjct: 867 LRTECATCK 875>NP_004144 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 LRTRIA + Sbjct: 318 LRTRIAASK 326>NP_001177748 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 LRTRIA + Sbjct: 318 LRTRIAASK 326>NP_001229769 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 R R+AVC Sbjct: 189 RLRLAVC 195>NP_001177747 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRTRIAVCR 9 LRTRIA + Sbjct: 318 LRTRIAASK 326>XP_006725395 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RTRIAVCR 9 RTR +CR Sbjct: 1209 RTRAPLCR 1216>XP_006722056 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RTRIAVCR 9 RTR +CR Sbjct: 1209 RTRAPLCR 1216>XP_005254346 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RTRIAVCR 9 +TR+ +CR Sbjct: 13 KTRLRLCR 20>XP_005254347 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 RTRIAVCR 9 +TR+ +CR Sbjct: 13 KTRLRLCR 20>XP_006718312 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 LRT ++VC Sbjct: 108 LRTLLSVC 115>XP_005253029 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRTRIAVC 8 LRT ++VC Sbjct: 108 LRTLLSVC 115>XP_005249968 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRTRIAVCR 9 LRT A C+ Sbjct: 582 LRTECATCK 590>XP_005249967 Length = 892 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRTRIAVCR 9 LRT A C+ Sbjct: 867 LRTECATCK 875>XP_005249966 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRTRIAVCR 9 LRT A C+ Sbjct: 867 LRTECATCK 875>XP_006715864 Length = 957 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRTRIAVCR 9 LRT A C+ Sbjct: 867 LRTECATCK 875>XP_005249965 Length = 958 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRTRIAVCR 9 LRT A C+ Sbjct: 867 LRTECATCK 875>XP_005273163 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 R R+AVC Sbjct: 168 RLRLAVC 174>XP_005273162 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 R R+AVC Sbjct: 168 RLRLAVC 174>XP_005273160 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 R R+AVC Sbjct: 234 RLRLAVC 240>XP_005270390 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 RTR A+C Sbjct: 557 RTRCALC 563>XP_006711823 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 RTR A+C Sbjct: 560 RTRCALC 566>NP_733843 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 RTR A+C Sbjct: 560 RTRCALC 566>NP_001017434 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RTRIAVC 8 RTR A+C Sbjct: 309 RTRCALC 315Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.352 0.147 0.475 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,404 Number of extensions: 682 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |