Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 22 134 NP_001034568 17 3301 XP_005268301 17 3301 XP_006720407 17 3301 NP_000811 17 4312 NP_060774 17 4312 NP_001158268 16 5631 NP_064506 16 5631 NP_775742 16 5631 NP_056075 16 5631 XP_005259889 16 5631 XP_006713021 16 5631 XP_006713020 16 5631 XP_006713019 16 5631 NP_003226 16 7355 NP_001180473 16 7355 NP_001146 16 7355 XP_005251100 16 7355 XP_006716686 16 7355 XP_005251099 16 7355 XP_005251097 16 7355 XP_005251095 16 7355 XP_006716685 16 7355 XP_005268489 16 7355 XP_005264288 16 7355 NP_115642 15 9605 NP_001158213 15 9605 NP_001657 15 9605 NP_997320 15 9605 NP_001166169 15 9605 NP_003080 15 9605 NP_573570 15 9605 NP_001907 15 9605 NP_001166170 15 9605 NP_689716 15 9605 NP_001098714 15 9605 NP_001264004 15 9605 NP_998797 15 9605 NP_998796 15 9605 XP_005259370 15 9605 XP_006723477 15 9605 XP_005259369 15 9605 XP_005259368 15 9605 XP_005259234 15 9605 XP_006722401 15 9605 XP_006722400 15 9605 XP_006722399 15 9605 XP_006722398 15 9605 XP_005253612 15 9605 XP_005268429 15 9605 NP_002836 15 9605>NP_004251 Length = 1208 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRTFQVFH 9 LRRTFQ FH Sbjct: 1070 LRRTFQAFH 1078>NP_001034568 Length = 823 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTFQVF 8 R+TFQVF Sbjct: 238 RQTFQVF 244>XP_005268301 Length = 662 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTFQVF 8 R+TFQVF Sbjct: 77 RQTFQVF 83>XP_006720407 Length = 813 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRTFQVF 8 R+TFQVF Sbjct: 228 RQTFQVF 234>NP_000811 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRTFQVF 8 RR FQVF Sbjct: 47 RRAFQVF 53>NP_060774 Length = 360 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 LRR FQ+ H Sbjct: 333 LRRKFQLAH 341>NP_001158268 Length = 186 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RTFQVF 8 RTFQ+F Sbjct: 35 RTFQIF 40>NP_064506 Length = 1516 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 3 RTFQVFH 9 RTF FH Sbjct: 193 RTFSAFH 199>NP_775742 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RTFQVF 8 RTFQ+F Sbjct: 123 RTFQIF 128>NP_056075 Length = 1162 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 +RR Q+FH Sbjct: 83 IRRVSQLFH 91>XP_005259889 Length = 1130 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 +RR Q+FH Sbjct: 83 IRRVSQLFH 91>XP_006713021 Length = 161 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RTFQVF 8 RTFQ+F Sbjct: 123 RTFQIF 128>XP_006713020 Length = 174 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RTFQVF 8 RTFQ+F Sbjct: 123 RTFQIF 128>XP_006713019 Length = 259 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RTFQVF 8 RTFQ+F Sbjct: 123 RTFQIF 128>NP_003226 Length = 2768 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L +TFQVF Sbjct: 1313 LLQTFQVF 1320>NP_001180473 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LRRTFQVF 8 LRR FQ F Sbjct: 527 LRRVFQEF 534>NP_001146 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LRRTFQVF 8 LRR FQ F Sbjct: 559 LRRVFQEF 566>XP_005251100 Length = 2103 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L +TFQVF Sbjct: 1313 LLQTFQVF 1320>XP_006716686 Length = 2111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L +TFQVF Sbjct: 1313 LLQTFQVF 1320>XP_005251099 Length = 2121 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L +TFQVF Sbjct: 1313 LLQTFQVF 1320>XP_005251097 Length = 2178 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L +TFQVF Sbjct: 1313 LLQTFQVF 1320>XP_005251095 Length = 2704 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L +TFQVF Sbjct: 1313 LLQTFQVF 1320>XP_006716685 Length = 2747 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L +TFQVF Sbjct: 1313 LLQTFQVF 1320>XP_005268489 Length = 667 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 LRRTFQVF 8 LRR FQ F Sbjct: 553 LRRVFQEF 560>XP_005264288 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 LR+T VFH Sbjct: 167 LRQTETVFH 175>NP_115642 Length = 1984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 LRRTFQVFH 9 L+R FQ H Sbjct: 1357 LKRAFQTAH 1365>NP_001158213 Length = 986 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 RRTFQVFH 9 ++T+Q +H Sbjct: 168 KKTYQAYH 175>NP_001657 Length = 946 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 2 RRTFQVFH 9 ++T+Q +H Sbjct: 168 KKTYQAYH 175>NP_997320 Length = 4471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TFQVFH 9 TFQ FH Sbjct: 4117 TFQPFH 4122>NP_001166169 Length = 984 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L+R F+VF Sbjct: 879 LKRRFEVF 886>NP_003080 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 LRR F+V+ Sbjct: 119 LRREFEVY 126>NP_573570 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L+R F+VF Sbjct: 918 LKRRFEVF 925>NP_001907 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 +RR FQV+ Sbjct: 110 IRRGFQVY 117>NP_001166170 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L+R F+VF Sbjct: 854 LKRRFEVF 861>NP_689716 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RRTFQVF 8 R+TFQ F Sbjct: 305 RQTFQAF 311>NP_001098714 Length = 1465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTFQVFH 9 +RT VFH Sbjct: 1425 QRTVDVFH 1432>NP_001264004 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 LRR ++V H Sbjct: 213 LRRHYEVHH 221>NP_998797 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RRTFQVF 8 R+TFQ F Sbjct: 305 RQTFQAF 311>NP_998796 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 RRTFQVF 8 R+TFQ F Sbjct: 305 RQTFQAF 311>XP_005259370 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 LRR ++V H Sbjct: 213 LRRHYEVHH 221>XP_006723477 Length = 1284 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 LRR ++V H Sbjct: 151 LRRHYEVHH 159>XP_005259369 Length = 1288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 LRR ++V H Sbjct: 213 LRRHYEVHH 221>XP_005259368 Length = 1346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRRTFQVFH 9 LRR ++V H Sbjct: 213 LRRHYEVHH 221>XP_005259234 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 LRR F+V+ Sbjct: 119 LRREFEVY 126>XP_006722401 Length = 1432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTFQVFH 9 +RT VFH Sbjct: 1392 QRTVDVFH 1399>XP_006722400 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTFQVFH 9 +RT VFH Sbjct: 1429 QRTVDVFH 1436>XP_006722399 Length = 1477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTFQVFH 9 +RT VFH Sbjct: 1437 QRTVDVFH 1444>XP_006722398 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTFQVFH 9 +RT VFH Sbjct: 1454 QRTVDVFH 1461>XP_005253612 Length = 4589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 TFQVFH 9 TFQ FH Sbjct: 4235 TFQPFH 4240>XP_005268429 Length = 1002 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 LRRTFQVF 8 L+R F+VF Sbjct: 897 LKRRFEVF 904>NP_002836 Length = 1452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 RRTFQVFH 9 +RT VFH Sbjct: 1412 QRTVDVFH 1419Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.356 0.154 0.504 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 466,623 Number of extensions: 952 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |