Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_037407 17 2528 NP_001243112 17 2528 NP_001243111 17 2528 XP_006721247 17 2528 XP_006721246 17 2528 XP_006721245 17 2528 XP_006721244 17 2528 NP_079194 17 4312 NP_001138790 17 4312 NP_001138788 17 4312 NP_001138789 17 4312 NP_001138787 17 4312 XP_006723939 17 4312 XP_005260616 17 4312 XP_005260615 17 4312 NP_001091873 16 5631 NP_001091872 16 5631 NP_065778 16 5631 XP_005261180 16 5631 XP_005261178 16 5631 XP_005251808 16 5631 NP_619639 16 7355 NP_733842 16 7355 NP_002470 16 7355 NP_085143 16 7355 NP_006763 16 7355 NP_689413 16 7355 NP_055241 16 7355 NP_004411 16 7355 XP_005253545 16 7355 XP_006719218 16 7355 NP_001258931 15 9605 NP_212132 15 9605 NP_001258929 15 9605 NP_001258930 15 9605 NP_001258928 15 9605 NP_006648 15 9605 NP_996848 15 9605 XP_006724025 15 9605 XP_006724024 15 9605 XP_006724023 15 9605 XP_005271350 15 9605 XP_005271349 15 9605 NP_689764 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2514 LRRSVSVDM 2522>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2531 LRRSVSVDM 2539>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2531 LRRSVSVDM 2539>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2531 LRRSVSVDM 2539>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2531 LRRSVSVDM 2539>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2531 LRRSVSVDM 2539>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2531 LRRSVSVDM 2539>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2530 LRRSVSVDM 2538>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 LRRSVSVDI 9 LRRSVSVD+ Sbjct: 2531 LRRSVSVDM 2539>NP_037407 Length = 2663 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RSVSVDI Sbjct: 1787 LYRSVSVDI 1795>NP_001243112 Length = 2663 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RSVSVDI Sbjct: 1787 LYRSVSVDI 1795>NP_001243111 Length = 2663 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RSVSVDI Sbjct: 1787 LYRSVSVDI 1795>XP_006721247 Length = 2564 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RSVSVDI Sbjct: 1688 LYRSVSVDI 1696>XP_006721246 Length = 2620 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RSVSVDI Sbjct: 1744 LYRSVSVDI 1752>XP_006721245 Length = 2629 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RSVSVDI Sbjct: 1753 LYRSVSVDI 1761>XP_006721244 Length = 2629 Score = 17.3 bits (33), Expect = 2528 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RSVSVDI Sbjct: 1753 LYRSVSVDI 1761>NP_079194 Length = 356 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 120 LSRSISVDL 128>NP_001138790 Length = 340 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 104 LSRSISVDL 112>NP_001138788 Length = 356 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 120 LSRSISVDL 128>NP_001138789 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 13 LSRSISVDL 21>NP_001138787 Length = 356 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 120 LSRSISVDL 128>XP_006723939 Length = 249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 13 LSRSISVDL 21>XP_005260616 Length = 334 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 98 LSRSISVDL 106>XP_005260615 Length = 441 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L RS+SVD+ Sbjct: 205 LSRSISVDL 213>NP_001091873 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRRSVSVD 8 LRRS+S+D Sbjct: 340 LRRSLSMD 347>NP_001091872 Length = 1066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRRSVSVD 8 LRRS+S+D Sbjct: 340 LRRSLSMD 347>NP_065778 Length = 1066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRRSVSVD 8 LRRS+S+D Sbjct: 340 LRRSLSMD 347>XP_005261180 Length = 865 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRRSVSVD 8 LRRS+S+D Sbjct: 340 LRRSLSMD 347>XP_005261178 Length = 1066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 LRRSVSVD 8 LRRS+S+D Sbjct: 340 LRRSLSMD 347>XP_005251808 Length = 3075 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRSVSVDI 9 +RSVS+D+ Sbjct: 3062 KRSVSIDL 3069>NP_619639 Length = 4074 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRSVSVDI 9 RRSV VD+ Sbjct: 1418 RRSVRVDL 1425>NP_733842 Length = 3396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRSVSVDI 9 RRSV VD+ Sbjct: 1418 RRSVRVDL 1425>NP_002470 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 R+SVSVD Sbjct: 75 RKSVSVD 81>NP_085143 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L+RS S+DI Sbjct: 396 LKRSFSLDI 404>NP_006763 Length = 1343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 LRR+VSV + Sbjct: 82 LRRTVSVPV 90>NP_689413 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSVSVDI 9 RSVSVD+ Sbjct: 19 RSVSVDL 25>NP_055241 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RSVSVDI 9 RSVSVD+ Sbjct: 19 RSVSVDL 25>NP_004411 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L+RS S+DI Sbjct: 390 LKRSFSLDI 398>XP_005253545 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L+RS S+DI Sbjct: 248 LKRSFSLDI 256>XP_006719218 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 L+RS S+DI Sbjct: 396 LKRSFSLDI 404>NP_001258931 Length = 632 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 RRS+S+D Sbjct: 178 RRSMSID 184>NP_212132 Length = 2109 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 RRS+S+D Sbjct: 178 RRSMSID 184>NP_001258929 Length = 2100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 RRS+S+D Sbjct: 178 RRSMSID 184>NP_001258930 Length = 2098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 RRS+S+D Sbjct: 178 RRSMSID 184>NP_001258928 Length = 2129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 RRS+S+D Sbjct: 178 RRSMSID 184>NP_006648 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 LRR+VSV + Sbjct: 444 LRRAVSVPL 452>NP_996848 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 LRR+VSV + Sbjct: 444 LRRAVSVPL 452>XP_006724025 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 LRR+VSV + Sbjct: 487 LRRAVSVPL 495>XP_006724024 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 LRR+VSV + Sbjct: 487 LRRAVSVPL 495>XP_006724023 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRSVSVDI 9 LRR+VSV + Sbjct: 444 LRRAVSVPL 452>XP_005271350 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 RRS+S+D Sbjct: 178 RRSMSID 184>XP_005271349 Length = 2131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSVSVD 8 RRS+S+D Sbjct: 178 RRSMSID 184>NP_689764 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRSVSVD 8 RRS SVD Sbjct: 273 RRSASVD 279Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.141 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 365,786 Number of extensions: 703 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |