Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001275701 20 509 NP_004561 20 509 NP_001275703 20 509 XP_005253450 20 509 XP_006719151 20 509 XP_005251896 18 1135 XP_005251895 18 1135 XP_005251894 18 1135 NP_055925 18 1135 NP_001487 18 1935 NP_689957 16 5631 NP_001005161 16 5631 XP_006721879 16 5631 XP_006721878 16 5631 XP_006721877 16 5631 XP_006721876 16 5631 XP_005257269 16 5631 XP_006721875 16 5631 XP_005257264 16 5631 NP_056469 16 5631 NP_001136067 16 7355 NP_001017962 16 7355 NP_005782 16 7355 NP_640337 16 7355 NP_001121187 16 7355 NP_001258867 16 7355 NP_055795 16 7355 NP_001401 16 7355 XP_005250166 16 7355 XP_006715402 16 7355 XP_005247964 16 7355 XP_006713889 16 7355 XP_006713888 16 7355 NP_057576 15 9605 NP_001171272 15 9605 NP_055054 15 9605 NP_001005191 15 9605 NP_653191 15 9605 NP_061130 15 9605 XP_006718995 15 9605 XP_005274425 15 9605 XP_006718994 15 9605 XP_006718993 15 9605 XP_005274424 15 9605 XP_005274423 15 9605 NP_203753 15 9605 NP_443187 15 9605>NP_001275701 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 LRR TFSQP Sbjct: 754 LRRWTFSQP 762>NP_004561 Length = 1445 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 LRR TFSQP Sbjct: 713 LRRWTFSQP 721>NP_001275703 Length = 1264 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 LRR TFSQP Sbjct: 532 LRRWTFSQP 540>XP_005253450 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 LRR TFSQP Sbjct: 754 LRRWTFSQP 762>XP_006719151 Length = 1486 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 LRR TFSQP Sbjct: 754 LRRWTFSQP 762>XP_005251896 Length = 1063 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RRLTFSQP 9 RR+TF+QP Sbjct: 1055 RRITFTQP 1062>XP_005251895 Length = 1077 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RRLTFSQP 9 RR+TF+QP Sbjct: 1069 RRITFTQP 1076>XP_005251894 Length = 1086 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RRLTFSQP 9 RR+TF+QP Sbjct: 1078 RRITFTQP 1085>NP_055925 Length = 1101 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 RRLTFSQP 9 RR+TF+QP Sbjct: 1093 RRITFTQP 1100>NP_001487 Length = 400 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 LRRLTFSQP 9 LRRL FS P Sbjct: 251 LRRLCFSDP 259>NP_689957 Length = 2213 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRLTFSQP 9 RRLT S P Sbjct: 345 RRLTISNP 352>NP_001005161 Length = 314 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRRLTFSQ 8 L+RLTF Q Sbjct: 165 LKRLTFCQ 172>XP_006721879 Length = 112 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 36 LQRLTASEP 44>XP_006721878 Length = 134 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 36 LQRLTASEP 44>XP_006721877 Length = 135 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 37 LQRLTASEP 45>XP_006721876 Length = 176 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 6 LQRLTASEP 14>XP_005257269 Length = 176 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 6 LQRLTASEP 14>XP_006721875 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 36 LQRLTASEP 44>XP_005257264 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 36 LQRLTASEP 44>NP_056469 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+RLT S+P Sbjct: 37 LQRLTASEP 45>NP_001136067 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRRLTFSQP 9 LRR T S P Sbjct: 360 LRRATISNP 368>NP_001017962 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRRLTFSQP 9 LRR T S P Sbjct: 360 LRRATISNP 368>NP_005782 Length = 681 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRRLTFSQP 9 L+R+TF+ P Sbjct: 328 LKRVTFALP 336>NP_640337 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LRRLTFSQ 8 ++RLT+SQ Sbjct: 977 IQRLTYSQ 984>NP_001121187 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LRRLTFSQ 8 ++RLT+SQ Sbjct: 1013 IQRLTYSQ 1020>NP_001258867 Length = 2845 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRRLTFSQP 9 L LTF QP Sbjct: 683 LHLLTFQQP 691>NP_055795 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LRRLTFSQ 8 ++RLT+SQ Sbjct: 1048 IQRLTYSQ 1055>NP_001401 Length = 2778 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 LRRLTFSQP 9 L LTF QP Sbjct: 683 LHLLTFQQP 691>XP_005250166 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RRLTFS 7 RRLTFS Sbjct: 112 RRLTFS 117>XP_006715402 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LRRLTFSQ 8 ++RLT+SQ Sbjct: 997 IQRLTYSQ 1004>XP_005247964 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LRRLTFSQ 8 ++RLT+SQ Sbjct: 1024 IQRLTYSQ 1031>XP_006713889 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LRRLTFSQ 8 ++RLT+SQ Sbjct: 1048 IQRLTYSQ 1055>XP_006713888 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 LRRLTFSQ 8 ++RLT+SQ Sbjct: 1048 IQRLTYSQ 1055>NP_057576 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LTFSQP 9 LTF+QP Sbjct: 140 LTFNQP 145>NP_001171272 Length = 146 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 LTFSQP 9 LTF+QP Sbjct: 140 LTFNQP 145>NP_055054 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 RR+T +QP Sbjct: 66 RRMTAAQP 73>NP_001005191 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 LRRLTFS 7 ++RLTFS Sbjct: 163 MKRLTFS 169>NP_653191 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 RRLTFSQ 8 RRL FSQ Sbjct: 176 RRLKFSQ 182>NP_061130 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 R L+FS+P Sbjct: 446 RSLSFSEP 453>XP_006718995 Length = 2382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 +RL+ SQP Sbjct: 715 KRLSLSQP 722>XP_005274425 Length = 2566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 +RL+ SQP Sbjct: 948 KRLSLSQP 955>XP_006718994 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 +RL+ SQP Sbjct: 948 KRLSLSQP 955>XP_006718993 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 +RL+ SQP Sbjct: 935 KRLSLSQP 942>XP_005274424 Length = 2614 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 +RL+ SQP Sbjct: 948 KRLSLSQP 955>XP_005274423 Length = 2615 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 +RL+ SQP Sbjct: 948 KRLSLSQP 955>NP_203753 Length = 2601 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RRLTFSQP 9 +RL+ SQP Sbjct: 935 KRLSLSQP 942>NP_443187 Length = 710 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RLTFSQP 9 RL+FS+P Sbjct: 44 RLSFSRP 50Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.142 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 589,497 Number of extensions: 1234 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |