Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004662 17 2528 NP_775298 17 2528 XP_006722636 17 2528 XP_005258440 17 2528 XP_005258439 17 2528 XP_005258438 17 2528 XP_005258436 17 2528 XP_005258434 17 2528 XP_006722635 17 2528 XP_006722634 17 2528 NP_037417 17 4312 NP_001164100 16 5631 NP_060250 16 5631 NP_065971 16 5631 NP_079410 16 5631 NP_061330 16 5631 NP_115597 16 5631 XP_006723946 16 5631 XP_005260632 16 5631 XP_005260631 16 5631 XP_005260630 16 5631 XP_005256233 16 5631 XP_005256232 16 5631 XP_005256231 16 5631 XP_005256229 16 5631 XP_005256228 16 5631 XP_005256227 16 5631 XP_006721346 16 5631 XP_005256226 16 5631 XP_006721345 16 5631 XP_006721344 16 5631 XP_006721343 16 5631 XP_005256225 16 5631 XP_006716523 16 5631 XP_006716522 16 5631 XP_005251324 16 5631 XP_005251323 16 5631 XP_006713783 16 5631 XP_005247745 16 5631 XP_006713782 16 5631 NP_006497 16 5631 NP_056372 16 7355 NP_005843 16 7355 NP_001005273 16 7355 NP_055646 16 7355 XP_006721493 16 7355 XP_005256488 16 7355 XP_006721492 16 7355 XP_006721491 16 7355 XP_006721490 16 7355 XP_006721489 16 7355 XP_006721488 16 7355 XP_005256486 16 7355 XP_005256485 16 7355 XP_006721487 16 7355 XP_006721486 16 7355 XP_005256484 16 7355 XP_006713495 16 7355 NP_001005271 16 7355 NP_001073893 15 9605 NP_060417 15 9605 XP_006721547 15 9605 XP_005256611 15 9605 XP_005256609 15 9605 XP_005256607 15 9605 XP_005256608 15 9605 XP_006721546 15 9605 XP_005256606 15 9605>NP_004662 Length = 621 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 166 LVQSSIQRF 174>NP_775298 Length = 572 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 166 LVQSSIQRF 174>XP_006722636 Length = 611 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 205 LVQSSIQRF 213>XP_005258440 Length = 613 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 157 LVQSSIQRF 165>XP_005258439 Length = 613 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 157 LVQSSIQRF 165>XP_005258438 Length = 613 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 157 LVQSSIQRF 165>XP_005258436 Length = 622 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 166 LVQSSIQRF 174>XP_005258434 Length = 626 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 170 LVQSSIQRF 178>XP_006722635 Length = 660 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 205 LVQSSIQRF 213>XP_006722634 Length = 661 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 L QSS+QRF Sbjct: 205 LVQSSIQRF 213>NP_037417 Length = 731 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 LRQSSVQRF 9 ++QSS+Q+F Sbjct: 87 IKQSSLQKF 95>NP_001164100 Length = 2581 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1187 LRQAAIDRF 1195>NP_060250 Length = 2997 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1344 LRQAAIDRF 1352>NP_065971 Length = 2302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 908 LRQAAIDRF 916>NP_079410 Length = 2881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>NP_061330 Length = 511 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RQSSVQRF 9 RQS +Q+F Sbjct: 170 RQSEIQKF 177>NP_115597 Length = 2715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 837 LRQAAIDRF 845>XP_006723946 Length = 1414 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 837 LRQAAIDRF 845>XP_005260632 Length = 2377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 837 LRQAAIDRF 845>XP_005260631 Length = 2667 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 789 LRQAAIDRF 797>XP_005260630 Length = 2693 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 815 LRQAAIDRF 823>XP_005256233 Length = 2391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 729 LRQAAIDRF 737>XP_005256232 Length = 2424 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 762 LRQAAIDRF 770>XP_005256231 Length = 2573 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_005256229 Length = 2881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_005256228 Length = 2882 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_005256227 Length = 2897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_006721346 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_005256226 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_006721345 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_006721344 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_006721343 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_005256225 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1236 LRQAAIDRF 1244>XP_006716523 Length = 1912 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 259 LRQAAIDRF 267>XP_006716522 Length = 2192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 539 LRQAAIDRF 547>XP_005251324 Length = 2996 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1344 LRQAAIDRF 1352>XP_005251323 Length = 2997 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 LRQSSVQRF 9 LRQ+++ RF Sbjct: 1344 LRQAAIDRF 1352>XP_006713783 Length = 633 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ + QRF Sbjct: 264 LRQMATQRF 272>XP_005247745 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ + QRF Sbjct: 485 LRQMATQRF 493>XP_006713782 Length = 854 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ + QRF Sbjct: 485 LRQMATQRF 493>NP_006497 Length = 849 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ + QRF Sbjct: 485 LRQMATQRF 493>NP_056372 Length = 1954 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1078 LRQEAIDRF 1086>NP_005843 Length = 1966 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1114 LRQEAIDRF 1122>NP_001005273 Length = 2000 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1114 LRQEAIDRF 1122>NP_055646 Length = 2925 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 L+Q VQRF Sbjct: 353 LKQEVVQRF 361>XP_006721493 Length = 2056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1169 LRQEAIDRF 1177>XP_005256488 Length = 1185 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_006721492 Length = 1924 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_006721491 Length = 2025 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_006721490 Length = 2036 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1094 LRQEAIDRF 1102>XP_006721489 Length = 2045 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_006721488 Length = 2056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1114 LRQEAIDRF 1122>XP_005256486 Length = 2060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_005256485 Length = 2080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_006721487 Length = 2111 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1169 LRQEAIDRF 1177>XP_006721486 Length = 2114 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_005256484 Length = 2115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>XP_006713495 Length = 2969 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 L+Q VQRF Sbjct: 397 LKQEVVQRF 405>NP_001005271 Length = 2059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 LRQSSVQRF 9 LRQ ++ RF Sbjct: 1173 LRQEAIDRF 1181>NP_001073893 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367>NP_060417 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RQSSVQRF 9 RQS QRF Sbjct: 308 RQSVAQRF 315>XP_006721547 Length = 1638 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367>XP_005256611 Length = 1643 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367>XP_005256609 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367>XP_005256607 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367>XP_005256608 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367>XP_006721546 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367>XP_005256606 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 LRQSSVQR 8 LR+S VQR Sbjct: 360 LRESRVQR 367Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.132 0.330 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 301,533 Number of extensions: 448 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |